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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

GSK3A Gene

protein-coding   GIFtS: 69
GCID: GC19M042734

glycogen synthase kinase 3 alpha

 Explore 23 diseases affiliated with
GSK3A via our new
 Human Malady Compendium 
Biological research products
for GSK3A
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Glycogen Synthase Kinase 3 Alpha1 2     Glycogen Synthase Kinase-3 Alpha2
Serine/Threonine-Protein Kinase GSK3A2 3     EC 2.7.11.13
GSK-3 Alpha2 3     EC 2.7.118
EC 2.7.11.263 8     

External Ids:    HGNC: 46161   Entrez Gene: 29312   Ensembl: ENSG000001057237   OMIM: 6067845   UniProtKB: P498403   

Export aliases for GSK3A gene to outside databases

Previous GC identifers: GC19M043380 GC19M043126 GC19M047410 GC19M047426 GC19M039164


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for GSK3A:
This gene encodes a multifunctional Ser/Thr protein kinase that is implicated in the control of several regulatory
proteins including glycogen synthase, and transcription factors, such as JUN. It also plays a role in the WNT and PI3K
signaling pathways, as well as regulates the production of beta-amyloid peptides associated with Alzheimer's disease.
(provided by RefSeq, Oct 2011)

UniProtKB/Swiss-Prot: GSK3A_HUMAN, P49840
Function: Constitutively active protein kinase that acts as a negative regulator in the hormonal control of glucose
homeostasis, Wnt signaling and regulation of transcription factors and microtubules, by phosphorylating and
inactivating glycogen synthase (GYS1 or GYS2), CTNNB1/beta-catenin, APC and AXIN1. Requires primed phosphorylation of
the majority of its substrates. Contributes to insulin regulation of glycogen synthesis by phosphorylating and
inhibiting GYS1 activity and hence glycogen synthesis. Regulates glycogen metabolism in liver, but not in muscle. May
also mediate the development of insulin resistance by regulating activation of transcription factors. In Wnt
signaling, regulates the level and transcriptional activity of nuclear CTNNB1/beta-catenin. Facilitates amyloid
precursor protein (APP) processing and the generation of APP-derived amyloid plaques found in Alzheimer disease. May
be involved in the regulation of replication in pancreatic beta-cells. Is necessary for the establishment of neuronal
polarity and axon outgrowth

summary for GSK3A:
Glycogen synthase kinase 3 (GSK-3), a serine-threonine kinase with two isoforms (alpha and beta), was
originally discovered as a key enzyme in glycogen metabolism. GSK-3 was subsequently shown to function in
cell division, proliferation, motility and survival. GSK-3 plays a role in a number of pathological
conditions including cancer and diabetes and is increasingly seen as an important component of neurological
diseases. GSK-3 phosphorylates tau and presenilin-1, which are involved in the development of Alzheimer's
disease. Both isoforms of GSK-3 are ubiquitously expressed, although particularly high levels of GSK-3beta
are found in the brain where it is involved in synaptic plasticity, possibly via regulation of NMDA receptor
trafficking. GSK-3 phosphorylates over 40 different substrates including signaling proteins, transcription
factors and structural proteins, and is part of the signal transduction cascade of a large number of growth
factors and cytokines. The activity of GSK is regulated by phosphorylation (Akt, S6K, RSK, PKA and PKC),
dephosphorylation (PP1 and PP2A), and by binding to protein complexes (with beta-catenin, axin, CK1 and the
APC complex).

Gene Wiki entry for GSK3A


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000019.9  NC_018930.1  NT_011109.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the GSK3A gene promoter:
         CREB   p53   AP-1   deltaCREB   ATF-2   c-Jun   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for GSK3A

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GSK3A


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q13.2   Ensembl cytogenetic band:  19q13.2   HGNC cytogenetic band: 19q13

GSK3A Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GSK3A gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19M042734:  view genomic region     (about GC identifiers)

Start:
42,734,338 bp from pter      End:
42,746,777 bp from pter
Size:
12,440 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: GSK3A_HUMAN, P49840 (See protein sequence)
Recommended Name: Glycogen synthase kinase-3 alpha  
Size: 483 amino acids; 50981 Da
Subunit: Monomer. Interacts with ARRB2 (By similarity). Interacts with AXIN1 and CTNNB1/beta-catenin
Miscellaneous: Higher expression and activity of GSK3A are found in the skeletal muscle (vastus lateralis) of patients
with type 2 diabetes (PubMed:10868943). Several potent GSK3 (GSK3A and GSK3B) inhibitors have been identified and
characterized in preclinical models for treatments of type 2 diabetes (PubMed:19366350)
1 PDB 3D structure from and Proteopedia for GSK3A:
2DFM (3D)    
Secondary accessions: O14959

Explore the universe of human proteins at neXtProt for GSK3A: NX_P49840

Post-translational modifications:

  • Phosphorylated by AKT1 at Ser-21: upon insulin-mediated signaling, the activated PKB/AKT1 protein kinase phosphorylates
  • and desactivates GSK3A, resulting in the dephosphorylation and activation of GYS1. Activated by phosphorylation at
    Tyr-2791
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P49840

  • 4/19 DME Specific Peptides for GSK3A (P49840) (see all 19)
     CDFGSAK  YFFYSSG  LPPLFNF  VPETVYR 

    GSK3A Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_063937.2  
    ENSEMBL proteins: 
     ENSP00000222330   ENSP00000381301   ENSP00000412663  
    Reactome Protein details: P49840
    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant GSK3A Protein
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    Novus Biologicals GSK3A Proteins
    Novus Biologicals GSK3A Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS11035810
    GO:0030877beta-catenin destruction complex TAS19366350


    GSK3A for ontologies           About GeneDecksing



    GSK3A Antibody Products: 
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    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    GSK3A for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR017441 Protein_kinase_ATP_BS
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR011009 Kinase-like_dom
     IPR008271 Ser/Thr_kinase_AS
     IPR000719 Prot_kinase_cat_dom

    Graphical View of Domain Structure for InterPro Entry P49840

    ProtoNet protein and cluster: P49840

    UniProtKB/Swiss-Prot: GSK3A_HUMAN, P49840
    Similarity: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. GSK-3 subfamily
    Similarity: Contains 1 protein kinase domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: GSK3A_HUMAN, P49840
    Function: Constitutively active protein kinase that acts as a negative regulator in the hormonal control of glucose
    homeostasis, Wnt signaling and regulation of transcription factors and microtubules, by phosphorylating and
    inactivating glycogen synthase (GYS1 or GYS2), CTNNB1/beta-catenin, APC and AXIN1. Requires primed phosphorylation of
    the majority of its substrates. Contributes to insulin regulation of glycogen synthesis by phosphorylating and
    inhibiting GYS1 activity and hence glycogen synthesis. Regulates glycogen metabolism in liver, but not in muscle. May
    also mediate the development of insulin resistance by regulating activation of transcription factors. In Wnt
    signaling, regulates the level and transcriptional activity of nuclear CTNNB1/beta-catenin. Facilitates amyloid
    precursor protein (APP) processing and the generation of APP-derived amyloid plaques found in Alzheimer disease. May
    be involved in the regulation of replication in pancreatic beta-cells. Is necessary for the establishment of neuronal
    polarity and axon outgrowth
    Catalytic activity: ATP + [tau protein] = ADP + [tau protein] phosphate
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Activated by phosphorylation at Tyr-279. In response to insulin, inhibited by phosphorylation at
    Ser-21 by PKB/AKT1; phosphorylation at this site causes a conformational change, preventing access of substrates to
    the active site. Inhibited by lithium

         Genatlas biochemistry entry for GSK3A:
    glycogen synthase kinase 3 alpha,regulator of glycogen synthesis in skeletal muscle,unstabilized in response to insulin
    with both protein level and activity increased by heat stress

    Enzyme Numbers (IUBMB): EC 2.7.11.261 2 EC 2.7.112 EC 2.7.11.11

    miRNA
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    hsa-miR-485-5p hsa-miR-4318 hsa-miR-324-3p hsa-miR-887 hsa-miR-3617 hsa-miR-3653 hsa-miR-138-2* hsa-miR-182*
    SwitchGear 3'UTR luciferase reporter plasmidGSK3A 3' UTR sequence
    Inhib. RNA
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    Gene Editing
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    Clone
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GSK3A

    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004672protein kinase activity ----
    GO:0004674protein serine/threonine kinase activity IDA11035810
    GO:0005515protein binding IPI16365045
    GO:0005524ATP binding IEA--
    GO:0034236protein kinase A catalytic subunit binding IPI11035810


    GSK3A for ontologies           About GeneDecksing


    4 GenomeRNAi human phenotypes for GSK3A:
     Decreased influenza A virus in  Decreased substrate adherent c  Increased viability with TRAIL  PARP inhibitor sensitization 

    Animal Models:
         Mouse knock-out Gsk3atm1.1Jrw for GSK3A
         12 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Gsk3a):
     adipose tissue  behavior/neurological  growth/size  homeostasis/metabolism  immune system 
     liver/biliary system  nervous system  normal  other  pigmentation 
     renal/urinary system  vision/eye 

    GSK3A for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/46 super-pathways (see all 46About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Signaling by FGFR
    8/12 pathways (see all 12)
    Signaling by FGFR1.00
    DAP12 signaling0.83
    Downstream signaling of activated FGFR0.92
    Signaling by EGFR in Cancer0.83
    Signaling by FGFR in disease0.91
    DAP12 interactions0.76
    Signaling by ERBB20.89
    Signaling by PDGF0.72
    2IL-9 Signaling Pathways
    8/10 pathways (see all 10)
    IL-9 Signaling Pathways1.00
    IL-15 Signaling Pathways0.86
    IL-21 Signaling Pathways0.90
    IL-4 Signaling Pathways0.80
    IL-7 Signaling Pathways0.90
    Development_Thrombopoietin-regulated cell processes0.36
    Common Cytokine Receptor Gamma-Chain Family Signaling Pathways0.90
    Development Thrombopoietin-regulated cell processes0.36
    3PIP3 activates AKT signaling
    8/10 pathways (see all 10)
    PIP3 activates AKT signaling1.00
    PI3K/AKT activation0.97
    PI3K/AKT Signaling in Cancer1.00
    GAB1 signalosome0.96
    PI3K events in ERBB2 signaling1.00
    Constitutive PI3K/AKT Signaling in Cancer0.88
    PI3K events in ERBB4 signaling1.00
    Signaling by SCF-KIT0.72
    4Development IGF-RI signaling
    Development IGF-RI signaling1.00
    Signal transduction_AKT signaling0.49
    Development_IGF-1 receptor signaling0.99
    Signal transduction AKT signaling0.49
    5Activation of cAMP-Dependent PKA
    Activation of cAMP-Dependent PKA1.00
    Activation of PKA through GPCR0.71
    cAMP Pathway0.77
    PKA Signaling0.56

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    5/9 EMD Millipore Pathways for GSK3A (see all 9)
        Signal transduction cAMP signaling
    Immune response NFAT in immune response
    Signal transduction PKA signaling
    Development Leptin signaling via PI3K-dependent pathway
    Development IGF-RI signaling

    5/9 R&D Systems Pathways for GSK3A (see all 9)
        Wnt Signaling Pathway
    IL-21 Signaling Pathways
    IL-2 Signaling Pathways
    IL-4 Signaling Pathways
    Adipocytokines & Insulin Signaling

    5/16 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for GSK3A (see all 16)
        DHA Signaling
    PKA Signaling
    Sertoli-Sertoli Cell Junction Dynamics
    IL-4 Pathway
    Molecular Mechanisms of Cancer

    4 Cell Signaling Technology (CST) Pathways for GSK3A
        Wnt / Hedgehog / Notch
    Neuroscience
    PI3K / Akt Signaling
    Glucose / Energy Metabolism

    4 Tocris Bioscience Pathways for GSK3A
        Akt Pathway
    NF-kappaB Pathway
    MAPK Pathway
    mTOR Pathway

    5/9 GeneGo (Thomson Reuters) Pathways for GSK3A (see all 9)
        G-protein signaling G-Protein alpha-s signaling cascades
    Signal transduction cAMP signaling
    Signal transduction PKA signaling
    Signal transduction AKT signaling
    Development Thrombopoietin-regulated cell processes

    5/11 BioSystems Pathways for GSK3A (see all 11
        Integrated Breast Cancer Pathway
    Glycogen Metabolism
    SREBP signalling
    Integrated Pancreatic Cancer Pathway
    IL-3 Signaling Pathway

    5/35        Reactome Pathways for GSK3A (see all 35)
        Signaling by EGFR in Cancer
    Downstream signal transduction
    Signal Transduction
    Signaling by PDGF
    Downstream Signaling Events Of B Cell Receptor (BCR)


    1         Kegg Pathway  (Kegg details for GSK3A):
        Chemokine signaling pathway


    GSK3A for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for GSK3A

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/59 Interacting proteins for GSK3A (P498401, 2, 3 ENSP000002223304) via UniProtKB, MINT, STRING, and/or I2D (see all 59)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    AXIN1O151692, 3, ENSP000002623204MINT-4544606 I2D: score=3 STRING: ENSP00000262320
    BICD1Q96G012, 3, ENSP000002814744MINT-4051287 I2D: score=1 STRING: ENSP00000281474
    DEAF1O753981, 3, ENSP000003718464EBI-1044067,EBI-718185 I2D: score=1 STRING: ENSP00000371846
    YWHAGP619812, 3, ENSP000003063304MINT-50786 I2D: score=4 STRING: ENSP00000306330
    CREMQ030603, ENSP000002653724I2D: score=2 STRING: ENSP00000265372
    About this table

    Gene Ontology (GO): 5/37 biological process terms (GO ID links to tree view) (see all 37):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003073regulation of systemic arterial blood pressure ISS--
    GO:0003214cardiac left ventricle morphogenesis ISS--
    GO:0005977glycogen metabolic process IEA--
    GO:0006349regulation of gene expression by genetic imprinting ----
    GO:0006468protein phosphorylation IDA11035810


    GSK3A for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    GSK3A for compounds           About GeneDecksing

    EMD Millipore small molecules for GSK3A:
    Small Molecule - inhibitor
    Enzo Life Sciences drugs & compounds for GSK3A

    Compounds for GSK3A available from Tocris Bioscience    About this table
    CompoundAction CAS #
    L803-mtsSelective inhibitor of GSK-3--
    FRATideGSK-3 inhibitor[251087-38-4]
    BIO-acetoximeSelective GSK-3alpha/beta inhibitor[667463-85-6]
    SB 415286 Potent, selective GSK-3 inhibitor [264218-23-7]
    SB 216763 Potent, selective GSK-3 inhibitor [280744-09-4]

    2 HMDB Compounds for GSK3A    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    7 Novoseek chemical compound relationships for GSK3A gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    glycogen 83.2 42 7931292 (2), 7891113 (2), 11113543 (2), 7787767 (1) (see all 24)
    lithium 54.2 2 18322101 (1), 17456772 (1)
    serine 52.7 9 7514166 (2), 18322101 (1), 7891113 (1), 11113543 (1)
    threonine 47.2 8 7514166 (2), 7695638 (1), 11113543 (1)
    okadaic acid 32.2 7 8655632 (3), 7514166 (2)
    tyrosine 28.2 51 7890813 (5), 8825421 (5), 9215524 (4), 7514166 (4) (see all 5)
    genistein 23.1 6 9215524 (2), 7806586 (2)

    Search CenterWatch for drugs/clinical trials and news about GSK3A 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for GSK3A gene: 
    NM_019884.2  

    Unigene Cluster for GSK3A:

    Glycogen synthase kinase 3 alpha
    Hs.466828  [show with all ESTs]
    Unigene Representative Sequence: CR749620
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000222330(uc002otb.1) ENST00000398249(uc002ota.1) ENST00000453535
    ENST00000493059

    miRNA
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    8/13 QIAGEN miScript miRNA Assays for microRNAs that regulate GSK3A (see all 13):
    hsa-miR-485-5p hsa-miR-4318 hsa-miR-324-3p hsa-miR-887 hsa-miR-3617 hsa-miR-3653 hsa-miR-138-2* hsa-miR-182*
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    Inhib. RNA
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    OriGene siRNA: GSK3A
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat GSK3A
    Clone
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat GSK3A
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat GSK3A

    Additional cDNA sequence: 

    BC027984.1 BC051865.2 CR749620.1 D63424.1 L40027.1 

    16 DOTS entries:

    DT.449417  DT.91656740  DT.92456675  DT.100821603  DT.40123674  DT.100821602  DT.95210349  DT.100821609 
    DT.121444278  DT.40123671  DT.95210342  DT.97799184  DT.97810039  DT.91645606  DT.95354451  DT.97766011 

    24/530 AceView cDNA sequences (see all 530):

    BX420137 BM975480 AI760234 AI336462 BQ646002 BU617983 AA341368 CD365605 
    AA749280 AI682929 AI347109 BM770231 BQ671377 BF927805 AI005372 BM770276 
    BM771463 AI920971 AI635545 AI393051 CA415843 BG152775 BQ574526 AW470070 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for GSK3A    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12
    SP1:                                                              -                     
    SP2:                                                                                    
    SP3:                                                                                    


    ECgene alternative splicing isoforms for GSK3A

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    GSK3A expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AAAACCTGAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    GSK3A expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    3 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    EpiblastEpiblastEarly Epiblast CellsEarly Embryo
    Paraxial MesodermParaxial MesodermParaxial Mesoderm CellsMesoderm
    LiverLiver BudLiver
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See GSK3A Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for GSK3A

    SOURCE GeneReport for Unigene cluster: Hs.466828
        SABiosciences Expression via Pathway-Focused PCR Arrays including GSK3A (see all 7): 
              Insulin Signaling Pathway in human mouse rat
              Tight Junctions in human mouse rat
              WNT Signaling Pathway in human mouse rat
              EGF / PDGF Signaling Pathway in human mouse rat
              Alzheimer's Disease in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for GSK3A gene from 7/33 species (see all 33)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    lizard
    (Anolis carolinensis)
    Reptilia GSK3A6
    --
    87(a)
    1 → many
    GL343909.1(9018-13403)
    zebrafish
    (Danio rerio)
    Actinopterygii gsk3a2 glycogen synthase kinase 3 alpha 78.29(n)   30664  AJ223501.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta sgg3 circadian rhythm protein serine/threonine
    kinase
    78(a)
    (best of 4)
        --
    worm
    (Caenorhabditis elegans)
    Secernentea Y18D10A.53 Eukaryotic protein kinase domain 76(a)
    (best of 6)
      I(12827414-12832717)   --
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes MCK1(YNL307C)4
    RIM111
    Protein serine/threonine/tyrosine (dual-specificity) more4
    Rim11p1
    58.76(n)1
    59.32(a)1
      14(57573-56446)4
    8551701  NP_013859.11  8554094 
     NP_014092.14 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons BIN26
    SKdZeta6
    (see all 10)
    Shaggy-related protein kinase zeta
    (see all 10)
    60(a)
    58(a)
    (see all 10)
    many ↔ many
    many ↔ many
    (see all 10)
    4(10296273-10301228)
    2(13182069-13185949)
    rice
    (Oryza sativa)
    Liliopsida AK070062.12   -- 75.93(n)    AK070062.1 


    ENSEMBL Gene Tree for GSK3A (if available)
    TreeFam Gene Tree for GSK3A (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for GSK3A gene
    GSK3B2  
    18/34 SIMAP similar genes for GSK3A using alignment to 2 protein entries:     GSK3A_HUMAN (see all proteins) (see all similar genes):
    DKFZp686D0638    GSK3B    MAK    CDKL2    CDC2    CDK3
    PCTK3    CCRK    CDK1    CDK15    CDK17    CDK5
    CDK7    DKFZp686O0215    MAPK3    MOK    DKFZp686L20222    CDK2

    GSK3A for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/211 NCBI SNPs in GSK3A are shown (see all 211    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 19 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs129829231,2
    C--39176602(+) TTTTCC/ATGGGA 1 -- us2k1 trp31Minor allele frequency- A:0.00NA 2
    rs118786201,2
    C,F,A,H,--39177641(+) CCCCAG/AGTGGA 1 -- nc-transcript-variant20Minor allele frequency- A:0.12NS EA NA CSA WA EU 2909
    rs1136807171,2
    --39177830(+) TGAGGG/AGGCGG 1 -- nc-transcript-variant1Minor allele frequency- A:0.50CSA 2
    rs790219281,2
    --39177886(+) ACCCTC/TTGTGA 1 -- nc-transcript-variant5Minor allele frequency- T:0.04CSA WA NA EA 360
    rs783888651,2
    C,F,--39177945(+) CAGGGG/CCGTGT 1 -- nc-transcript-variant3Minor allele frequency- C:0.06NA 124
    rs72520491,2
    C,F,H--39178323(+) cagtaG/Tctcac 1 -- nc-transcript-variant8Minor allele frequency- T:0.02NS NA 922
    rs1116474691,2
    --39178341(+) ATCCTG/AGCACT 1 -- nc-transcript-variant1Minor allele frequency- A:0.50CSA 2
    rs730334221,2
    C,F,--39178898(+) ATTCTA/GCCTCA 1 -- nc-transcript-variant1Minor allele frequency- G:0.04NA 120
    rs771089481,2
    --39179096(+) CCAAAA/GGGCGC 1 -- nc-transcript-variant2Minor allele frequency- G:0.04CSA NA 122
    rs1841386561,2
    --42733838(+) GAAATG/TAAGGC 1 -- int10--------

    HapMap Linkage Disequilibrium report for GSK3A (42734338 - 42746777 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for GSK3A
         1 CNV: 5445

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    GSK3A for disorders           About GeneDecksing

    OMIM gene information: 606784    OMIM disorders: --

    20/23 diseases for GSK3A (see all 23):    About MalaCards
    alzheimer's disease    amyotrophic lateral sclerosis    neurologic diseases    lateral sclerosis
    coronary heart disease    insulin resistance    brain disease    multiple myeloma
    parkinson's disease    myeloma    leiomyoma    colon cancer
    schizophrenia    pancreatic cancer    prostate cancer    pancreatitis
    hypoxia    prostatitis    thyroiditis    melanoma

    8 Novoseek disease relationships for GSK3A gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    neurofibrillary tangles 51.3 1 8725894 (1)
    brain diseases 42.4 4 7931292 (3)
    alzheimers disease 41 6 7931292 (3), 1336152 (1), 7704571 (1)
    neoplastic transformation 34.8 1 7593269 (1)
    shock 12.2 1 8655632 (1)
    schizophrenia 6.99 6 8530529 (3), 14518171 (1)
    tumors 0 11 7593269 (3), 8825421 (3), 7890813 (2), 8655632 (1)
    carcinoma 0 6 9215524 (2), 8825421 (1)

    Human Genome Epidemiology (HuGE) Navigator: GSK3A (5 documents)

    Export disorders for GSK3A gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for GSK3A gene, integrated from 9 sources (see all 156):
    (articles sorted by number of sources associating them with GSK3A)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Isolation and chromosomal mapping of human glycogen synthase kinase-3 alpha and -3 beta encoding genes. (PubMed id 9809441)1, 3, 9 Shaw P.C....Anderton B.H. (1998)
    2. Glycogen synthase kinase 3: more than a namesake. (PubMed id 19366350)1, 2 Rayasam G.V....Ray A. (2009)
    3. The DNA sequence and biology of human chromosome 19. (PubMed id 15057824)1, 2 Grimwood J.... Lucas S.M. (2004)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. GSK-3alpha regulates production of Alzheimer's disease amyloid-beta peptides. (PubMed id 12761548)1, 2 Phiel C.J....Klein P.S. (2003)
    6. Glycogen synthase kinase-3: properties, functions, and regulation. (PubMed id 11749387)1, 2 Ali A....Woodgett J.R. (2001)
    7. Protein kinase FA/glycogen synthase kinase-3 alpha after heparin potentiation phosphorylates tau on sites abnormally phosphorylated in Alzheimer's disease brain. (PubMed id 7931292)1, 9 Yang S.D....Huang J.J. (1994)
    8. Role of glycogen synthase kinase-3 alpha in insulin action in cultured human skeletal muscle cells. (PubMed id 17569761)1, 9 Ciaraldi T.P....Henry R.R. (2007)
    9. Phosphorylation and inactivation of glycogen synthase kinase 3 by protein kinase A. (PubMed id 11035810)1, 9 Fang X....Mills G.B. (2000)
    10. Glycogen synthase kinase 3 alpha and 3 beta do not colocalize with neurofibrillary tangles. (PubMed id 8725894)1, 9 Harr S.D....Hyman B.T. (1996)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2931 HGNC: 4616 AceView: ERFandGSK3A Ensembl:ENSG00000105723 euGenes: HUgn2931
    ECgene: GSK3A Kegg: 2931 H-InvDB: GSK3A

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for GSK3A Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for GSK3A Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for GSK3A gene:
    Search GeneIP for patents involving GSK3A

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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