GSG2 Gene
protein-coding GIFtS: 52
GCID: GC17P003627
|
|
germ cell associated 2 (haspin)
| |
Aliases
for GSG2 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Germ Cell Associated 2 (Haspin)1 2 | | Haspin1 | | Germ Cell-Specific Gene 2 Protein2 3 | | HASPIN2 | | Haploid Germ Cell-Specific Nuclear Protein Kinase2 3 | | Serine/Threonine-Protein Kinase Haspin2 | | H-Haspin1 | | EC 2.7.11.13 |
Export aliases for GSG2 gene to outside databasesPrevious GC identifers: GC17P003939 GC17P003578 GC17P003833 GC17P003573 GC17P003517 |
Summaries
for GSG2 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
UniProtKB/Swiss-Prot: HASP_HUMAN, Q8TF76Function: Serine/threonine-protein kinase that phosphorylates histone H3 at 'Ser-3' (H3T3ph) during mitosis. Thispositions and activates AURKB and other components of the chromosomal passenger complex (CPC) at centromeres to ensureproper chromatid cohesion, metaphase alignment and normal progression through the cell cycle
Gene Wiki entry for GSG2
|
Genomic Views
for GSG2 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000017.10 NC_018928.1 NT_010718.16
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for GSG2
Other transcription factors
Search SABiosciences Chromatin IP Primers for GSG2
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GSG2 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 17p13 Ensembl cytogenetic band: 17p13.2 HGNC cytogenetic band: 17p13GSG2 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 17 GeneLoc Exon Structure GeneLoc location for GC17P003627: view genomic region
(about GC identifiers)
Start:
|
3,627,197 bp from pter |
End:
|
3,630,067 bp from pter |
Size:
|
2,871 bases |
Orientation:
|
plus strand |
|
Proteins
for GSG2 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: HASP_HUMAN, Q8TF76 (See
protein sequence)Recommended Name: Serine/threonine-protein kinase haspin Size: 798 amino acids; 88495 Da
Cofactor: Magnesium
Subcellular location: Nucleus. Chromosome. Cytoplasm, cytoskeleton, spindle. Note=Nuclear during interphase andassociates with the chromosomes and spindle apparatus during mitosis
6/7 PDB 3D structures from  and Proteopedia  for GSG2 (see all 7):2VUW (3D)
2WB8 (3D)
3DLZ (3D)
3E7V (3D)
3F2N (3D)
3FMD (3D)
Secondary accessions: Q5U5K3 Q96MN1 Q9BXS7Alternative splicing: 2 isoforms: Q8TF76-1 Q8TF76-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for GSG2: NX_Q8TF76
Post-translational modifications:
Autophosphorylated on both serine and threonine residues (By similarity). Strongly phosphorylated during mitosis butthis does not appear to significantly affect its intrinsic kinase activity. Phosphorylation by AURKB is required forfull activity toward histone H3 at 'Ser-3' in mitosis1
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q8TF76
GSG2 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_114171.2
ENSEMBL proteins: ENSP00000325290
Human Recombinant Protein Products:
Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7): About this table
GSG2 for ontologies About GeneDecksing
GSG2 Antibody Products:
Assay Products for GSG2: |
Protein
Domains /
Families
for GSG2 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
GSG2 for domains About GeneDecksing
4 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q8TF76ProtoNet protein and cluster: Q8TF76 UniProtKB/Swiss-Prot: HASP_HUMAN, Q8TF76Similarity: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. Haspin subfamilySimilarity: Contains 1 protein kinase domain |
Function
for GSG2 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: HASP_HUMAN, Q8TF76Function: Serine/threonine-protein kinase that phosphorylates histone H3 at 'Ser-3' (H3T3ph) during mitosis. Thispositions and activates AURKB and other components of the chromosomal passenger complex (CPC) at centromeres to ensureproper chromatid cohesion, metaphase alignment and normal progression through the cell cycleCatalytic activity: ATP + a protein = ADP + a phosphoproteinEnzyme regulation: Constitutive activity that does not require phosphorylation. Specifically inhibited by3-(1H-indazol-5-yl)-N-propylimidazo[1,2-b]pyridazin-6-amine (CHR-6494)Enzyme Number (IUBMB): EC 2.7.11.11
Clone
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OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for GSG2
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
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In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GSG2 |
Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6): About this table
GSG2 for ontologies About GeneDecksing
1 GenomeRNAi human phenotype for GSG2:
|
Pathways & Interactions
for GSG2 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for GSG2
STRING Interaction
Network Preview (showing 3 interactants - click image to see more details)
5/14 Interacting proteins for GSG2 (Q8TF761, 2, 3 ENSP000003252904) via UniProtKB, MINT, STRING, and/or I2D (see all 14)About this table
Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8): About this table
GSG2 for ontologies About GeneDecksing
|
Drugs & Compounds
for GSG2 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for GSG2
1 HMDB Compound for GSG2 About this table
4 DrugBank Compounds for GSG2 About this table
Search CenterWatch for drugs/clinical trials and news about GSG2 / HASP
|
Transcripts
for GSG2 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for GSG2 gene: NM_031965.2 Unigene Cluster for GSG2: Germ cell associated 2 (haspin) Hs.534059 [show with all ESTs]Unigene Representative Sequence: AK2927151 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000325418(uc002fwp.3)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for GSG2 (see all 2)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for GSG2
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: GSG2 (NM_031965) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for GSG2 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GSG2 |
Additional cDNA sequence: AB039834.3 AF289865.1 AK292715.1 AK310546.1 AK315247.1 BC016626.1 BC036181.1 BC047457.1 3 DOTS entries: DT.40272358 DT.95270360 DT.100735073 24/29 AceView cDNA sequences (see all 29): CR615999 BM458397 BM013960 BC036181 BG390073 AK056691 AB039834 AL530641 NM_031965 AA504486 BX103601 AL530642 AF289865 BM838281 BC016626 BG025225 BC047457 AA504563 BI562569 AA765234 AW405732 BI562471 BM152111 AW752339
GeneLoc Exon Structure
|
Expression
for GSG2 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| GSG2 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: AAGCAAAAAA
About this image
See GSG2 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for GSG2
SOURCE GeneReport for Unigene cluster: Hs.534059
UniProtKB/Swiss-Prot: HASP_HUMAN, Q8TF76Tissue specificity: Strongly expressed in testis. Also present in thymus and bone marrow and low levels observed inprostate, intestine, lung, spleen and lymph node. Expressed in fetal skin, liver, kidney and small intestine and alsoin proliferating but not non-proliferating cell lines
SABiosciences Custom PCR Arrays for GSG2
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for GSG2
Browse OriGene validated miRNA SYBR primer pairs
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Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GSG2 |
Orthologs
for GSG2 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of eukaryotes.
Orthologs for GSG2 gene from 7/20 species (see all 20) About this table
| Organism |
Taxonomic
classification |
Gene |
Description |
Human
Similarity |
Orthology
Type |
Details |
mouse
(Mus musculus) |
Mammalia |
Gsg21 , 5 |
germ cell-specific gene 21, 5 |
75.79(n)1
65.6(a)1 |
|
11 (45.25 cM)5
148411 NM_010353.21 NP_034483.11
731354855 |
chicken
(Gallus gallus) |
Aves |
GSG21 |
germ cell associated 2 (haspin) |
52.73(n)
46.48(a) |
|
427834 XM_425408.2 XP_425408.2 |
zebrafish
(Danio rerio) |
Actinopterygii |
si:dkeyp-26a9.26 |
si:dkeyp-26a9.2 |
24(a) |
1 ↔ 1 |
1(22263363-22280628) |
fruit fly
(Drosophila melanogaster) |
Insecta |
Haspin3 |
protein serine/threonine kinase |
40(a) |
|
-- |
worm
(Caenorhabditis elegans) |
Secernentea |
F22H10.53 |
-- |
37(a) |
|
X(16717006-16717976) -- |
thale cress
(Arabidopsis thaliana) |
eudicotyledons |
AT1G094506 |
protein kinase family protein |
23(a) |
1 ↔ 1 |
1(3049024-3053112) |
rice
(Oryza sativa) |
Liliopsida |
-- |
serine/threonine-protein kinase Haspin, putative, ... |
22(a) |
1 ↔ 1 |
7(26503370-26510463) |
ENSEMBL Gene Tree for GSG2 (if available)
TreeFam Gene Tree for GSG2 (if available) |
Paralogs
for GSG2 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| -- |
Genomic Variants
for GSG2 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for GSG2
1 CNV: 4982 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing GSG2 |
|
Disorders
/ Diseases
for GSG2 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
GSG2 for disorders About GeneDecksing
OMIM gene information: 609240
OMIM disorders: --
6  diseases for GSG2: About MalaCardsmouth disease rhinotracheitis hepatitis b hepatitis
prostatitis neuronitis
1 disease from the University of Copenhagen DISEASES database for GSG2:Rhinotracheitis Human Genome Epidemiology (HuGE) Navigator: GSG2 (1 document)
Export disorders for GSG2 gene to outside databases
|
Publications
for GSG2 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for GSG2 gene, integrated from 9 sources (see all 33):
(articles sorted by number of sources associating them with GSG2) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Cloning and characterization of human haspin gene encoding haploid germ cell-specific nuclear protein kinase. (PubMed id 11228240)1, 2, 9 Tanaka H....Nishimune Y. (2001)
- Regulation of mitotic chromosome cohesion by Haspin and Aurora B. (PubMed id 17084365)1, 2, 9 Dai J....Higgins J.M. (2006)
- The kinase haspin is required for mitotic histone H3 Thr 3 phosphorylation and normal metaphase chromosome alignment. (PubMed id 15681610)1, 2, 9 Dai J.... Higgins J.M.G. (2005)
- The Haspin gene: location in an intron of the Integrin Alpha-E gene, associated transcription of an Integrin alpha-E-derived RNA and expression in diploid as well as haploid cells. (PubMed id 11311556)1, 2, 9 Higgins J.M.G. (2001)
- A positive feedback loop involving Haspin and Aurora B promotes CPC accumulation at centromeres in mitosis. (PubMed id 21658950)1, 2 Wang F....Higgins J.M. (2011)
- Two histone marks establish the inner centromere and chromosome bi-orientation. (PubMed id 20929775)1, 2 Yamagishi Y....Watanabe Y. (2010)
- Histone H3 Thr-3 phosphorylation by Haspin positions Aurora B at centromeres in mitosis. (PubMed id 20705812)1, 2 Wang F....Higgins J.M. (2010)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Haspin: a newly discovered regulator of mitotic chrom osome behavior. (PubMed id 19997740)1, 9 Higgins J.M. (2010)
|
External Searches for GSG2 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing GSG2 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing GSG2 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing GSG2 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for GSG2 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for GSG2 gene:
Search GeneIP for patents involving GSG2
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for GSG2 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat GSG2 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing GSG2 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GSG2 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat GSG2 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat GSG2 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat GSG2 |
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| |  |  |  |  | | | | |
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 |
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 | | | GSG2 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GSG2 |
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| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GSG2 |
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