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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

GRM4 Gene

protein-coding   GIFtS: 66
GCID: GC06M034891

glutamate receptor, metabotropic 4

 Explore 22 diseases affiliated with
GRM4 via our new
 Human Malady Compendium 
Biological research products
for GRM4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Glutamate Receptor, Metabotropic 41 2
MGLUR41 2 3 5
GPRC1D1 2 3
MGlu41
Metabotropic Glutamate Receptor 42
MGluR41

External Ids:    HGNC: 45961   Entrez Gene: 29142   Ensembl: ENSG000001244937   OMIM: 6041005   UniProtKB: Q148333   

Export aliases for GRM4 gene to outside databases

Previous GC identifers: GC06M033991 GC06M034036 GC06M034097 GC06M033731 GC06M034039 GC06M034203


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for GRM4:
L-glutamate is the major excitatory neurotransmitter in the central nervous system and activates both ionotropic and
metabotropic glutamate receptors. Glutamatergic neurotransmission is involved in most aspects of normal brain function
and can be perturbed in many neuropathologic conditions. The metabotropic glutamate receptors are a family of G
protein-coupled receptors, that have been divided into 3 groups on the basis of sequence homology, putative signal
transduction mechanisms, and pharmacologic properties. Group I includes GRM1 and GRM5 and these receptors have been
shown to activate phospholipase C. Group II includes GRM2 and GRM3 while Group III includes GRM4, GRM6, GRM7 and GRM8.
Group II and III receptors are linked to the inhibition of the cyclic AMP cascade but differ in their agonist
selectivities. Several transcript variants encoding different isoforms have been found for this gene. (provided by
RefSeq, Feb 2012)

UniProtKB/Swiss-Prot: GRM4_HUMAN, Q14833
Function: Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate
cyclase activity

summary for GRM4:
Metabotropic Glutamate (mGlu) group III receptors are members of the metabotropic class of glutamate
receptors, which also includes mGlu group I and mGlu group II receptors. Group III receptors are divided
into four subtypes, mGlu4, mGlu6, mGlu7 and mGlu8. The receptors are coupled to Gi/o which inhibits adenylyl
cyclase, decreasing the formation of cAMP. mGlu group III receptors are involved in spatial learning and
memory, and umami taste (mGlu4), stimulation of photoreceptors (mGlu6), long term depression (mGlu7) and
presynaptic inhibition in the perforant pathway (mGlu8). The human genes for mGlu4, mGlu6, mGlu7 and mGlu8
receptors have been localized to chromosomes 6 (6p21.3), 5 (5q35), 3 (3p26-p25) and 7 (7q31.3-q32.1)
respectively.

Gene Wiki entry for GRM4 (Metabotropic glutamate receptor 4)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_007592.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the GRM4 gene promoter:
         Egr-3   Spz1   USF1   AP-2gamma   POU2F1   E2F-1   E2F   USF-1   POU2F1a   NF-kappaB1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidGRM4 promoter sequence
   Search SABiosciences Chromatin IP Primers for GRM4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GRM4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.3   Ensembl cytogenetic band:  6p21.31   HGNC cytogenetic band: 6p21.3

GRM4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GRM4 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M034891:  view genomic region     (about GC identifiers)

Start:
33,989,628 bp from pter      End:
34,123,399 bp from pter
Size:
133,772 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: GRM4_HUMAN, Q14833 (See protein sequence)
Recommended Name: Metabotropic glutamate receptor 4 precursor  
Size: 912 amino acids; 101868 Da
Subunit: Interacts with PICK1 (By similarity)
Subcellular location: Cell membrane; Multi-pass membrane protein
Secondary accessions: B7Z1T9 B7Z1U6 F5GXM5 Q5SZ84
Alternative splicing: 3 isoforms:  Q14833-1   Q14833-2   Q14833-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for GRM4: NX_Q14833

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q14833

  • GRM4 Protein expression data from MOPED and PaxDb:    About this image 
    GRM4 Protein Expression
    REFSEQ proteins (7 alternative transcripts): 
    NP_000832.1  NP_001243738.1  NP_001243739.1  NP_001243740.1  NP_001243741.1  NP_001243742.1  NP_001243743.1  

    ENSEMBL proteins: 
     ENSP00000363296   ENSP00000363292   ENSP00000440556   ENSP00000437730   ENSP00000437925  
     ENSP00000398456   ENSP00000445533  
    Reactome Protein details: Q14833
    Human Recombinant Protein Products for GRM4: 
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    Novus Biologicals GRM4 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for GRM4

    Gene Ontology (GO): 5/8 cellular component terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular IDA15102938
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane IDA15102938
    GO:0016021integral to membrane ----
    GO:0031410cytoplasmic vesicle IDA15102938

    GRM4 for ontologies           About GeneDecksing



    GRM4 Antibody Products: 
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    Uscn ELISAs and CLIAs for GRM4


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    GRM4 for domains           About GeneDecksing

    5/7 InterPro domains/families (see all 7):
     IPR011500 GPCR_3_9-Cys_dom
     IPR000337 GPCR_3
     IPR001786 GPCR_3_mtglu_rcpt_4
     IPR017979 GPCR_3_CS
     IPR017978 GPCR_3_C

    Graphical View of Domain Structure for InterPro Entry Q14833

    ProtoNet protein and cluster: Q14833

    4 Blocks protein families:
    IPB000162 Metabotropic glutamate receptor signature
    IPB000337 G-protein coupled receptors family 3 (Metabotropic glutamate receptor-like)
    IPB001786 Metabotropic glutamate receptor 4 signature
    IPB001828 Extracellular ligand-binding receptor


    UniProtKB/Swiss-Prot: GRM4_HUMAN, Q14833
    Similarity: Belongs to the G-protein coupled receptor 3 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: GRM4_HUMAN, Q14833
    Function: Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate
    cyclase activity

         Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004930G-protein coupled receptor activity TAS9473604
    GO:0008066glutamate receptor activity TAS9473604
         
    GRM4 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for GRM4:
     Increased cell number in G2M,  

         2 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Grm4):
     behavior/neurological  nervous system 

    GRM4 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-out Grm4tm1Hpn for GRM4
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for GRM4 

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat GRM4
    8/19 QIAGEN miScript miRNA Assays for microRNAs that regulate GRM4 (see all 19):
    hsa-miR-2052 hsa-miR-3605-3p hsa-miR-29c hsa-miR-29a hsa-miR-486-3p hsa-miR-507 hsa-miR-548x hsa-miR-3119
    SwitchGear 3'UTR luciferase reporter plasmidGRM4 3' UTR sequence
    Inhib. RNA
    Products:
        
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GRM4


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/9 super-pathways (see all 9About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Class C/3 (Metabotropic glutamate/pheromone receptors)
    Class C/3 (Metabotropic glutamate/pheromone receptors)1.00
    Synaptic Neurotransmission: Glutamatergic Excitation0.33
    GPCRs, Class C Metabotropic glutamate, pheromone0.58
    2Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    3Class A/1 (Rhodopsin-like receptors)
    GPCR ligand binding0.75
    Neuroactive ligand-receptor interaction0.38
    4Glutamic acid signaling
    Glutamic acid signaling1.00
    5Signaling in Gap Junctions
    Signaling in Gap Junctions1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for GRM4
        Glutamic acid signaling

    1 R&D Systems Pathway for GRM4
        Synaptic Neurotransmission: Glutamatergic Excitation

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for GRM4
        Neuropathic Pain-Signaling in Dorsal Horn Neurons
    CREB Pathway
    Signaling in Gap Junctions

    1 BioSystems Pathway for GRM4 
        GPCRs, Class C Metabotropic glutamate, pheromone

    4        Reactome Pathways for GRM4
        Signal Transduction
    Class C/3 (Metabotropic glutamate/pheromone receptors)
    Signaling by GPCR
    GPCR ligand binding


    3         Kegg Pathways  (Kegg details for GRM4):
        Neuroactive ligand-receptor interaction
    Glutamatergic synapse
    Taste transduction


    GRM4 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for GRM4

    STRING Interaction Network Preview (showing 5 interactants - click image to see 10)

    5/14 Interacting proteins for GRM4 (Q148333 ENSP000003632964) via UniProtKB, MINT, STRING, and/or I2D (see all 14)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CALM1P621583, ENSP000003494674I2D: score=2 STRING: ENSP00000349467
    CALM2P621583I2D: score=2 
    CALM3P621583I2D: score=2 
    GNA15P306793, ENSP000002629584I2D: score=2 STRING: ENSP00000262958
    GNAQP501483, ENSP000002865484I2D: score=2 STRING: ENSP00000286548
    About this table

    Gene Ontology (GO): 5/9 biological process terms (GO ID links to tree view) (see all 9):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000187activation of MAPK activity IDA15102938
    GO:0007186G-protein coupled receptor signaling pathway ----
    GO:0007196adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway IMP15102938
    GO:0007268synaptic transmission TAS8738157
    GO:0007269neurotransmitter secretion TAS15102938

    GRM4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    GRM4 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Enzo Life Sciences drugs & compounds for GRM4

    Compounds for GRM4 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    MAP4Potent group II mGlu agonist. Also specific group III mGlu antagonist[157381-42-5]
    VU 0155041 sodium salt Potent, positive allosteric mGlu4 agonist. Sodium salt of VU 0155041 (Cat. No. 3248) --
    VU 0155041 Potent, positive allosteric mGlu4 agonist --
    CPPGVery potent group III mGlu antagonist[183364-82-1]
    Cinnabarinic acidSelective mGlu4 agonist[606-59-7]

    1 HMDB Compound for GRM4    About this table
    CompoundSynonyms CAS #PubMed Ids
    L-Glutamic acid(2S)-2-Aminopentanedioate (see all 49)56-86-0--

    1 DrugBank Compound for GRM4    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    L-Glutamic Acid(2S)-2-Aminopentanedioic acid (see all 15)56-86-0target--17360958

    10/12 Novoseek chemical compound relationships for GRM4 gene (see all 12)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    glutamate 81.7 98 18664603 (4), 16582932 (3), 19621591 (3), 8667369 (2) (see all 52)
    cppg 80.8 1 16582932 (1)
    quisqualate 69.4 3 15184361 (3)
    phenylglycine 66.8 2 7515823 (2)
    phosphoinositide 49.7 1 7931274 (1)
    kainate 45.4 2 9510076 (1), 10515165 (1)
    ganciclovir 40 1 7472317 (1)
    cyclic amp 32.7 7 7931274 (2), 10632098 (1), 1361913 (1), 9726424 (1)
    nmda 30.9 4 8667369 (1), 9510076 (1), 10515165 (1)
    gaba 25.9 5 10773016 (1), 19065062 (1), 9065826 (1)

    Search CenterWatch for drugs/clinical trials and news about GRM4 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for GRM4 gene (7 alternative transcripts): 
    NM_000841.2  NM_001256809.1  NM_001256810.1  NM_001256811.1  NM_001256812.1  NM_001256813.1  NM_001256814.1  

    Unigene Cluster for GRM4:

    Glutamate receptor, metabotropic 4
    Hs.429018  [show with all ESTs]
    Unigene Representative Sequence: AB209104
    7 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000374181(uc003oio.3 uc011dsl.2 uc003oiq.3 uc011dsm.2 uc003oir.4 uc011dsn.2 uc010jvh.3 uc010jvi.3)
    ENST00000374177 ENST00000538487(uc010jvk.1) ENST00000544773 ENST00000535756
    ENST00000455714 ENST00000545715(uc003oip.3)

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    hsa-miR-2052 hsa-miR-3605-3p hsa-miR-29c hsa-miR-29a hsa-miR-486-3p hsa-miR-507 hsa-miR-548x hsa-miR-3119
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    Additional cDNA sequence: 

    AB209104.1 AK055153.1 AK122836.1 AK122982.1 AK126746.1 AK131536.1 AK289524.1 AK289534.1 
    AK289563.1 AK293913.1 AK293949.1 AK308669.1 AK312300.1 BC130526.1 BC130528.1 BC139794.1 
    BC144057.1 EU432124.1 NR_046379.1 U92457.1 X80818.1 

    13 DOTS entries:

    DT.410918  DT.121329607  DT.40131070  DT.95331336  DT.121329541  DT.95158464  DT.101980978  DT.101980977 
    DT.121329559  DT.121329542  DT.121329577  DT.91681914  DT.91807435 

    24/37 AceView cDNA sequences (see all 37):

    AK131536 NM_000841 AA416557 AW275023 CK819155 AK122982 AA297156 AA297088 
    AA583221 X80818 CD609643 BE207131 BM128082 CA439788 U92457 AK126746 
    AA297070 T09090 AK122836 AW615557 BP359939 AW950825 CD609650 CD609645 

    GeneLoc Exon Structure

    5/15 Alternative Splicing Database (ASD) splice patterns (SP) for GRM4 (see all 15)    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c · 5d ^ 6a · 6b · 6c ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b · 9c ^ 10a · 10b · 10c · 10d ^ 11a ·
    SP1:                                                              -     -                                   -     -                 -                           
    SP2:                          -     -     -     -     -     -     -     -     -     -                       -     -                 -                           
    SP3:                                                                                                              -                 -                           
    SP4:                                                                                                        -     -                 -                       -   
    SP5:                                                                                                                                -                           

    ExUns: 11b ^ 12a · 12b ^ 13 ^ 14 ^ 15 ^ 16 ^ 17
    SP1:  -                                   -         
    SP2:  -                                   -         
    SP3:  -                                             
    SP4:  -                                   -         
    SP5:  -                                   -         


    ECgene alternative splicing isoforms for GRM4

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    GRM4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GTTTTGCAAA
    GRM4 Expression
    About this image

    GRM4 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    ES04(HES-4) (Embryonic Stem Cell)Early Embryo, Inner Cell Mass
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See GRM4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for GRM4

    SOURCE GeneReport for Unigene cluster: Hs.429018

    UniProtKB/Swiss-Prot: GRM4_HUMAN, Q14833
    Tissue specificity: Strongly expressed in the cerebellum. Expressed at low levels in hippocampus, hypothalamus and
    thalamus. No expression detected in liver

        SABiosciences Expression via Pathway-Focused PCR Arrays including GRM4 (see all 6): 
              Neurotransmitter Receptors in human mouse rat
              G-Protein-Coupled Receptor Signaling PathwayFinder in human mouse rat
              G Protein Coupled Receptors 384HT in human mouse rat
              GABA & Glutamate in human mouse rat
              Apoptosis 384HT in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for GRM4 gene from 6/21 species (see all 21)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves GRM41 glutamate receptor, metabotropic 4 81.48(n)
    88.2(a)
      419906  XM_003642745.1  XP_003642793.1 
    lizard
    (Anolis carolinensis)
    Reptilia GRM46
    --
    85(a)
    1 ↔ 1
    4(122013751-122091909)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.108842 Xenopus laevis transcribed sequence with moderate similarity more 73.59(n)    BX852903.1 
    zebrafish
    (Danio rerio)
    Actinopterygii wu:fi18a011 wu:fi18a01 75.19(n)
    81.48(a)
      567181  XM_690474.4  XP_695566.4 
    fruit fly
    (Drosophila melanogaster)
    Insecta Glu-RA3
    mtt1
    metabotropic glutamate receptor signaling
    pathway more3
    mangetout1
    45(a)
    (best of 2)3
    54.97(n)1
    45.35(a)1
      358321  NM_001144147.11  NP_001137619.11 
    worm
    (Caenorhabditis elegans)
    Secernentea mgl-13
    mgl-31
    metatrophic glutamate receptor3
    Protein MGL-31
    37(a)3
    45.71(n)1
    40.07(a)1
      X(10003865-10009638)3
    1773271  NM_171341.21  NP_741400.11 


    ENSEMBL Gene Tree for GRM4 (if available)
    TreeFam Gene Tree for GRM4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for GRM4 gene
    GRM72  GRM62  GRM82  GRM22  GRM52  GRM32  GRM12  
    9 SIMAP similar genes for GRM4 using alignment to 5 protein entries:     GRM4_HUMAN (see all proteins):
    DKFZp686H1993    GRM8    GRM7    GRM6    GRM3    GRM5
    GRM2    GRM1    CASR

    GRM4 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/2754 NCBI SNPs in GRM4 are shown (see all 2754    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 6 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1832745971,2
    --33989151(+) GCACCC/TGAGCC 8 -- ds5001 int10--------
    rs94619461,2
    C,F--33989350(+) GCTGCA/CGGGCA 8 -- ds5001 int14Minor allele frequency- C:0.16WA NA 242
    rs286307031,2
    C--33989404(+) ATTCCT/GGGAAT 8 -- ds5001 int11Minor allele frequency- G:0.00NA 2
    rs1382550661,2
    --33989604(+) CAGGAA/CCCTCA 8 -- ds5001 int10--------
    rs1496242691,2
    --33989624(+) GAGCCC/TGGGTG 8 -- ut31 nc-transcript-variant0--------
    rs1444854031,2
    --33989698(+) TTGTCA/GTCAAT 8 -- ut31 nc-transcript-variant0--------
    rs1150062691,2
    F--33989787(+) GCAGAC/TGGGCG 8 -- ut31 nc-transcript-variant1Minor allele frequency- T:0.14WA 118
    rs1864660951,2
    --33989811(+) AGACAC/GACGGC 8 -- ut31 nc-transcript-variant0--------
    rs1913641221,2
    --33990094(+) AGCAGA/GAGGAG 8 -- ut31 nc-transcript-variant0--------
    rs1828342891,2
    --33990114(+) AAGAGA/GATGAG 8 -- ut31 nc-transcript-variant0--------

    HapMap Linkage Disequilibrium report for GRM4 (33989628 - 34123399 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for GRM4
         3 CNVs: 81365 62508 62507
         1 Indel: 99501

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    GRM4 for disorders           About GeneDecksing

    OMIM gene information: 604100    OMIM disorders: --

    20/22 diseases for GRM4 (see all 22):    About MalaCards
    juvenile myoclonic epilepsy    temporal lobe epilepsy    idiopathic generalized epilepsy    generalized epilepsy
    amyotrophic lateral sclerosis    bipolar i disorder    lateral sclerosis    giant cell tumor
    tuberous sclerosis    diabetic neuropathy    colon cancer    multiple sclerosis
    neuropathy    parkinson's disease    medulloblastoma    seizures
    schizophrenia    prostate cancer    retinitis    prostatitis

    1 disease from the University of Copenhagen DISEASES database for GRM4:
    Parkinson's disease

    5 Novoseek disease relationships for GRM4 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    myoclonic epilepsy juvenile 60.3 3 20338729 (1), 14582146 (1), 11223165 (1)
    schizophrenia 0 8 11525421 (4), 19351574 (3)
    colon cancer 0 4 15217955 (2), 15867225 (1)
    epilepsy 0 1 11223165 (1)
    tumors 0 3 20061814 (1), 15867225 (1)

    Genetic Association Database (GAD): GRM4
    Human Genome Epidemiology (HuGE) Navigator: GRM4 (11 documents)

    Export disorders for GRM4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for GRM4 gene, integrated from 9 sources (see all 108):
    (articles sorted by number of sources associating them with GRM4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular characterization and localization of human metabotropic glutamate receptor type 4. (PubMed id 8738157)1, 2, 3, 9 Makoff A.... Emson P. (1996)
    2. Group III human metabotropic glutamate receptors 4, 7 and 8: molecular cloning, functional expression, and comparison of pharmacological properties in RGT cells. (PubMed id 9473604)1, 2, 3, 9 Wu S.... Belagaje R.M. (1998)
    3. Mutation screening of the metabotropic glutamate receptor mGluR4 (GRM4) gene in patients with schizophrenia. (PubMed id 11525421)1, 2, 4, 9 Ohtsuki T.... Arinami T. (2001)
    4. Molecular cloning, functional expression and pharmacological characterization of the human metabotropic glutamate receptor type 4. (PubMed id 7617140)1, 2, 9 Flor P.J.... Kuhn R. (1995)
    5. Bipolar I disorder and schizophrenia: a 440-single-nucleotide polymorphism screen of 64 candidate genes among Ashkenazi Jewish case-parent trios. (PubMed id 16380905)1, 4 Fallin M.D....Pulver A.E. (2005)
    6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    7. The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404)1, 2 Mungall A.J.... Beck S. (2003)
    8. Metabotropic glutamate receptor 4 expression in colorectal carcinoma and its prognostic significance. (PubMed id 15867225)1, 9 Chang H.J....Park J.G. (2005)
    9. The metabotropic glutamate receptor 4 is internalized and desensitized upon protein kinase C activation. (PubMed id 16582932)1, 9 Mathiesen J.M. and Ramirez M.T. (2006)
    10. Metabotropic glutamate receptor 4-mediated 5-Fluorouracil resistance in a human colon cancer cell line. (PubMed id 15217955)1, 9 Yoo B.C....Park J.G. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2914 HGNC: 4596 AceView: GRM4 Ensembl:ENSG00000124493 euGenes: HUgn2914
    ECgene: GRM4 Kegg: 2914 H-InvDB: GRM4

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for GRM4 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for GRM4 gene:
    Search GeneIP for patents involving GRM4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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