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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

GRIP1 Gene

protein-coding   GIFtS: 59
GCID: GC12M066741

glutamate receptor interacting protein 1

 Explore 15 diseases affiliated with
GRIP1 via our new
 Human Malady Compendium 
Biological research products
for GRIP1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Glutamate Receptor Interacting Protein 11 2
GRIP2
Glutamate Receptor-Interacting Protein 12
GRIP-13

External Ids:    HGNC: 187081   Entrez Gene: 234262   Ensembl: ENSG000001559747   OMIM: 6045975   UniProtKB: Q9Y3R03   

Export aliases for GRIP1 gene to outside databases

Previous GC identifers: GC12M066134 GC12U900033 GC12M066459 GC12M065028 GC12M063792


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for GRIP1:
This gene encodes a member of the glutamate receptor interacting protein family. The encoded scaffold protein binds to
and mediates the trafficking and membrane organization of a number of transmembrane proteins. Alternatively spliced
transcript variants encoding different isoforms have been described. (provided by RefSeq, May 2010)

UniProtKB/Swiss-Prot: GRIP1_HUMAN, Q9Y3R0
Function: May play a role as a localized scaffold for the assembly of a multiprotein signaling complex and as mediator
of the trafficking of its binding partners at specific subcellular location in neurons

Gene Wiki entry for GRIP1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000012.11  NC_018923.1  NT_029419.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the GRIP1 gene promoter:
         COUP-TF1   COUP   HNF-4alpha2   Tal-1beta   HNF-4alpha1   AREB6   S8   COUP-TF   ITF-2   FOXO1   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for GRIP1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GRIP1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12q14.3   Ensembl cytogenetic band:  12q14.3   HGNC cytogenetic band: 12q13.13

GRIP1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GRIP1 gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12M066741:  view genomic region     (about GC identifiers)

Start:
66,741,211 bp from pter      End:
67,197,966 bp from pter
Size:
456,756 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: GRIP1_HUMAN, Q9Y3R0 (See protein sequence)
Recommended Name: Glutamate receptor-interacting protein 1  
Size: 1128 amino acids; 122422 Da
Subunit: Interacts with EPHA7, EPHB2, KIF5A, KIF5B, KIF5C, GRIA2, GRIA3, GRIPAP1/GRASP1, PPFIA1, PPFIA4, FRAS1, PLCD4,
PTPRF and liprins-alpha. Can form homomultimers or heteromultimers with GRIP2. Forms a ternary complex with GRIA2 and
CSPG4 (By similarity). Interacts with ATAD1 in an ATP-dependent manner. ATAD1-catalyzed ATP hydrolysis disrupts
binding to ATAD1 and to GRIA2 and leads to AMPAR complex disassembly (By similarity). Interacts with EFNB1, EFNB3 and
the C-terminal tail of PRLHR. Interacts with SLC30A9 (By similarity)
Subcellular location: Cytoplasmic vesicle. Endoplasmic reticulum. Cell junction, synapse, postsynaptic cell membrane
(By similarity). Note=Cytoplasmic and membrane-associated with vesicles, peri-Golgi complexes and endoplasmic
reticulum. Enriched in postsynaptic plasma membrane and postsynaptic densities (By similarity)
1 PDB 3D structure from and Proteopedia for GRIP1:
2JIL (3D)    
Secondary accessions: C9JT59 Q1RLM0
Alternative splicing: 3 isoforms:  Q9Y3R0-1   Q9Y3R0-2   Q9Y3R0-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for GRIP1: NX_Q9Y3R0

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9Y3R0

  • GRIP1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001171545.1  NP_066973.2  

    ENSEMBL proteins: 
     ENSP00000381098   ENSP00000439053   ENSP00000443006   ENSP00000446047   ENSP00000446024  
     ENSP00000446011   ENSP00000443860   ENSP00000440918   ENSP00000439124   ENSP00000438500  
     ENSP00000443392   ENSP00000438921   ENSP00000446067   ENSP00000352780   ENSP00000286445  
    Reactome Protein details: Q9Y3R0
    Human Recombinant Protein Products: 
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    Novus Biologicals GRIP1 Protein
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    Browse ProSpec Recombinant Proteins
    Uscn Proteins for GRIP1

    Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular ----
    GO:0005783endoplasmic reticulum IEA--
    GO:0005829cytosol TAS--
    GO:0005886plasma membrane TAS--
    GO:0016023cytoplasmic membrane-bounded vesicle IEA--


    GRIP1 for ontologies           About GeneDecksing



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    Browse OriGene Fluorogenic Cell Assay Kits
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    Uscn ELISAs and CLIAs for GRIP1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    GRIP1 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR001478 PDZ

    Graphical View of Domain Structure for InterPro Entry Q9Y3R0

    ProtoNet protein and cluster: Q9Y3R0

    1 Blocks protein family: IPB001478 PDZ/DHR/GLGF domain

    UniProtKB/Swiss-Prot: GRIP1_HUMAN, Q9Y3R0
    Domain: PDZ 6 mediates interaction with the PDZ recognition motif of EFNB1 and EPHB2 and with the C-terminus of PPFIA1
    and PPFIA4. PDZ 4 and PDZ 5 mediate interaction with the C-terminus of GRIA2 and GRIA3. PDZ 4, PDZ 5 and PDZ 6 mediate
    homomultimers. PDZ 7 mediates interaction with PDZ domain of GRASP1. PDZ 7 domain binds CSPG4. PDZ 6 mediates
    interaction with the C-terminus of liprins-alpha. PDZ 1, PDZ 2 and PDZ 3 mediate interaction with the PDZ-binding
    motif of FRAS1 (By similarity). PDZ 4 and PDZ 5 mediate interaction with PRLHR
    Similarity: Contains 7 PDZ (DHR) domains


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: GRIP1_HUMAN, Q9Y3R0
    Function: May play a role as a localized scaffold for the assembly of a multiprotein signaling complex and as mediator
    of the trafficking of its binding partners at specific subcellular location in neurons

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    hsa-miR-548j hsa-miR-361-5p hsa-miR-429 hsa-miR-548k hsa-miR-29a hsa-let-7a-2* hsa-miR-218 hsa-miR-548l
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GRIP1

    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003713transcription coactivator activity NAS15572661
    GO:0005515protein binding ----
    GO:0008013beta-catenin binding TAS16344550
    GO:0008022protein C-terminus binding IPI16344550
    GO:0030159receptor signaling complex scaffold activity NAS10197531


    GRIP1 for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-out Grip1tm1Rha for GRIP1
         10 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Grip1):
     cardiovascular system  embryogenesis  growth/size  homeostasis/metabolism  integument 
     limbs/digits/tail  mortality/aging  nervous system  renal/urinary system  vision/eye 

    GRIP1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/6 super-pathways (see all 6About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Transmission across Chemical Synapses
    Transmission across Chemical Synapses1.00
    Neuronal System0.67
    Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell0.72
    2Glutamate Binding, Activation of AMPA Receptors and Synaptic Plasticity
    Glutamate Binding, Activation of AMPA Receptors and Synaptic Plasticity1.00
    Trafficking of GluR2-containing AMPA receptors0.53
    Trafficking of AMPA receptors1.00
    3Selected targets of ESR1
    Selected targets of ESR11.00
    4Apoptotic Pathways in Synovial Fibroblasts
    Nuclear Receptor Activation by Vitamin-A0.57
    5Assembly of RNA Polymerase-II Initiation Complex
    Crosstalk Between CARM1 and ESRs0.32

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for GRIP1
        Selected targets of ESR1

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for GRIP1
        Nuclear Receptor Activation by Vitamin-A
    Glucocorticoid Receptor Signaling
    Crosstalk Between CARM1 and ESRs

    5/6        Reactome Pathways for GRIP1 (see all 6)
        Trafficking of AMPA receptors
    Transmission across Chemical Synapses
    Glutamate Binding, Activation of AMPA Receptors and Synaptic Plasticity
    Neuronal System
    Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell



    GRIP1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for GRIP1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/94 Interacting proteins for GRIP1 (Q9Y3R02, 3 ENSP000003810984) via UniProtKB, MINT, STRING, and/or I2D (see all 94)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H3AP684313, ENSP000003502754I2D: score=1 STRING: ENSP00000350275
    HIST1H3BP684313I2D: score=1 
    HIST1H3CP684313I2D: score=1 
    HIST1H3DP684313I2D: score=1 
    HIST1H3EP684313I2D: score=1 
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007268synaptic transmission TAS--
    GO:0008104protein localization IEA--
    GO:0030521androgen receptor signaling pathway NAS15572661
    GO:0035556intracellular signal transduction NAS10197531
    GO:0045893positive regulation of transcription, DNA-dependent NAS15572661


    GRIP1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    GRIP1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for GRIP1
    9 Novoseek chemical compound relationships for GRIP1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    glutamate 68.8 52 17093100 (2), 16157387 (2), 17121843 (2), 11641419 (1) (see all 33)
    alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid 49.9 1 9768844 (1)
    nmda 49.3 3 10414325 (1), 18160640 (1), 9687358 (1)
    1,25 dihydroxy vitamin d3 28.5 1 14726489 (1)
    okadaic acid 24.7 2 11641419 (1)
    steroid 23.3 5 16547076 (1), 12060666 (1), 15313931 (1)
    kainate 13.8 3 12597860 (2), 12941441 (1)
    tyrosine 10.1 2 11931740 (1), 19534761 (1)
    serine 7.58 3 17303296 (1)

    Search CenterWatch for drugs/clinical trials and news about GRIP1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for GRIP1 gene (2 alternative transcripts): 
    NM_001178074.1  NM_021150.3  

    Unigene Cluster for GRIP1:

    Glutamate receptor interacting protein 1
    Hs.505946  [show with all ESTs]
    Unigene Representative Sequence: NM_021150
    18 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000398016 ENST00000538164 ENST00000540854 ENST00000538211(uc001stl.1)
    ENST00000535323 ENST00000540433(uc010sta.1) ENST00000536215 ENST00000541299
    ENST00000542021 ENST00000543172 ENST00000535002 ENST00000545666 ENST00000542309
    ENST00000539540 ENST00000541947 ENST00000538373 ENST00000359742(uc001stk.3)
    ENST00000286445(uc001stj.3 uc001stm.3)

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    hsa-miR-548j hsa-miR-361-5p hsa-miR-429 hsa-miR-548k hsa-miR-29a hsa-let-7a-2* hsa-miR-218 hsa-miR-548l
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    Additional cDNA sequence: 

    AF074996.1 AJ133439.1 AK095519.1 AK295565.1 AK307576.1 BC029871.1 BC115393.1 BC115394.1 

    6 DOTS entries:

    DT.100751109  DT.453167  DT.121159566  DT.95256235  DT.40131604  DT.121159564 

    1 AceView cDNA sequence:

    BX281923 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for GRIP1    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21a · 21b ^ 22 ^ 23a · 23b · 23c
    SP1:                                                                                                                          -                                 
    SP2:                                      -     -     -     -     -     -     -     -     -     -     -     -     -     -     -     -     -                     
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            


    ECgene alternative splicing isoforms for GRIP1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    GRIP1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GTATTTATCG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See GRIP1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for GRIP1

    SOURCE GeneReport for Unigene cluster: Hs.505946
        SABiosciences Expression via Pathway-Focused PCR Array including GRIP1: 
              Synaptic Plasticity in human mouse rat

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    In Situ
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GRIP1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for GRIP1 gene from 5/17 species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Grip11 , 5 glutamate receptor interacting protein 11, 5 89.33(n)1
    96.47(a)1
      10 (67.33 cM)5
    740531  NM_028736.11  NP_083012.11 
     1194540345 
    chicken
    (Gallus gallus)
    Aves GRIP11 glutamate receptor interacting protein 1 81.11(n)
    89.82(a)
      427863  XM_425437.2  XP_425437.2 
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    --
    86(a)
    81(a)
    many → 1
    many → 1
    GL343256.1(405730-471446)
    GL343256.1(375992-395463)
    zebrafish
    (Danio rerio)
    Actinopterygii grip11 glutamate receptor interacting protein 1 71.69(n)
    80.69(a)
      558006  NM_001044851.1  NP_001038316.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Grip1 Glutamate receptor binding protein 47.25(n)
    41.9(a)
      50391  NM_132057.2  NP_572285.2 


    ENSEMBL Gene Tree for GRIP1 (if available)
    TreeFam Gene Tree for GRIP1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for GRIP1 gene
    11 SIMAP similar genes for GRIP1 using alignment to 14 protein entries:     GRIP1_HUMAN (see all proteins):
    LGALS12    GRIP2    IL16    DLG2    LGALS7    LGALS7B
    TJP2    DLG4    PDLIM7    MPDZ    LGALS2

    GRIP1 for paralogs           About GeneDecksing


    2 Pseudogenes.org Pseudogenes for GRIP1
    PGOHUM00000259815 PGOHUM00000259816


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/5996 NCBI SNPs in GRIP1 are shown (see all 5996    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1146492271,2
    C,F,--63793168(+) CCTATG/TAGAAG 2 -- ut311Minor allele frequency- T:0.02WA 118
    rs786199351,2
    F,--63793178(+) GAAAAG/ACTTTG 2 -- ut311Minor allele frequency- A:0.04EA 120
    rs2002324181,2
    C--63793507(+) TGCCAC/TGNNNN 2 -- ut310--------
    rs73097261,2
    C,F,H,--63793944(+) TAAAAT/CGAGCG 2 -- int114Minor allele frequency- C:0.05NS EA NA WA 1528
    rs123128311,2
    --63794375(+) accagC/Tctggg 2 -- int10--------
    rs1121461201,2
    C,--63794421(+) TTTTTA/TAAAAA 2 -- int13Minor allele frequency- T:0.05WA EA 240
    rs733310141,2
    C,--63794457(+) TACATG/TCACCC 2 -- int12Minor allele frequency- T:0.10WA 120
    rs1137514381,2
    --63795006(+) CGCTTC/GAACCT 2 -- int11Minor allele frequency- G:0.00CSA 1
    rs787391431,2
    F,--63795790(+) CCTGAA/GAGCCA 2 -- int11Minor allele frequency- G:0.03WA 118
    rs79675911,2
    C,--63796180(+) tgcacC/Tcaggc 2 -- int12Minor allele frequency- T:0.10WA 120

    HapMap Linkage Disequilibrium report for GRIP1 (66741211 - 66991211 bp, first 250kb of GRIP1)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 16 variations for GRIP1
         7 CNVs: 5673 9209 2989 86437 66255 38265 6990
         8 Indels: 71528 86434 66254 33256 86438 71527 86436 86435
         1 Inversion: 59711
    Human Gene Mutation Database (HGMD): GRIP1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing GRIP1
    DNA2.0 Custom Variant and Variant Library Synthesis for GRIP1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    GRIP1 for disorders           About GeneDecksing

    OMIM gene information: 604597    OMIM disorders: --

    15 diseases for GRIP1:    About MalaCards
    cryptophthalmos    epidermolysis bullosa    renal agenesis    fraser syndrome
    amyotrophic lateral sclerosis    lateral sclerosis    syndactyly    sporadic breast cancer
    rickets    breast cancer    schizophrenia    alzheimer's disease
    cerebritis    thyroiditis    neuronitis

    1 disease from the University of Copenhagen DISEASES database for GRIP1:
    Anosognosia

    7 Novoseek disease relationships for GRIP1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    fraser syndrome 78.2 5 18155042 (2)
    cryptophthalmos 72.5 2 14730302 (1)
    renal agenesis 46.9 2 14730302 (1)
    syndactyly 44.1 2 14730302 (1)
    genetic disorder 21.6 1 18155042 (1)
    schizophrenia 0 13 17303296 (6), 15696539 (1)
    breast cancer 0 1 15313931 (1)

    Human Genome Epidemiology (HuGE) Navigator: GRIP1 (18 documents)

    Export disorders for GRIP1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for GRIP1 gene, integrated from 9 sources (see all 130):
    (articles sorted by number of sources associating them with GRIP1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. EphrinB ligands recruit GRIP family PDZ adaptor proteins into raft membrane microdomains. (PubMed id 10197531)1, 2, 3, 9 Brueckner K....Klein R. (1999)
    2. The carboxyl terminus of the prolactin-releasing peptide receptor interacts with PDZ domain proteins involved in alpha-amino-3-hydroxy- 5-methylisoxazole-4-propionic acid receptor clustering. (PubMed id 11641419)1, 2, 9 Lin S.H.S.... Civelli O. (2001)
    3. The finished DNA sequence of human chromosome 12. (PubMed id 16541075)1, 2 Scherer S.E.... Gibbs R.A. (2006)
    4. No association of GRIP1 gene polymorphisms with schizophrenia in Chinese population. (PubMed id 17303296)1, 9 Tsai S.J....Hong C.J. (2007)
    5. Supramodular nature of GRIP1 revealed by the structure of its PDZ12 tandem in complex with the carboxyl tail of Fras1. (PubMed id 18155042)1, 9 Long J....Zhang M. (2008)
    6. The nuclear receptor interaction domain of GRIP1 is modulated by covalent attachment of SUMO-1. (PubMed id 12060666)1, 9 Kotaja N....Palvimo J.J. (2002)
    7. Effect of cellular environment on the selective activation of the vitamin D receptor by 1alpha,25-dihydroxyvitamin D3 and its analog 1alpha-fluoro-16-ene-20-epi-23-ene-26,27-bishomo-25-hydroxyvita min D3 (Ro-26-9228). (PubMed id 14726489)1, 9 Ismail A....Peleg S. (2004)
    8. Rapid and differential regulation of AMPA and kainate receptors at hippocampal mossy fibre synapses by PICK1 and GRIP. (PubMed id 12597860)1, 9 Hirbec H....Couthino V. (2003)
    9. Inhibitory cross-talk between estrogen receptor (ER) and constitutively activated androstane receptor (CAR). CAR inhibits ER-mediated signaling pathway by squelching p160 coactivators. (PubMed id 12114525)1, 9 Min G....Kemper J.K. (2002)
    10. Transcriptional regulation of human UGT1A1 gene expression: activated glucocorticoid receptor enhances constitutive androstane receptor/pregnane X receptor-mediated UDP-glucuronosyltransferase 1A1 regulation with glucocorticoid receptor-interacting protein 1. (PubMed id 15557560)1, 9 Sugatani J....Miwa M. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 23426 HGNC: 18708 AceView: GRIP1.2 Ensembl:ENSG00000155974 euGenes: HUgn23426
    ECgene: GRIP1 H-InvDB: GRIP1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for GRIP1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for GRIP1 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for GRIP1 gene:
    Search GeneIP for patents involving GRIP1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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