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Aliases for GRAPL Gene

Aliases for GRAPL Gene

  • GRB2-Related Adaptor Protein-Like 2 3

External Ids for GRAPL Gene

Summaries for GRAPL Gene

GeneCards Summary for GRAPL Gene

GRAPL (GRB2-Related Adaptor Protein-Like) is a Protein Coding gene. An important paralog of this gene is NCK1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GRAPL Gene

Genomics for GRAPL Gene

Genomic Location for GRAPL Gene

Start:
19,127,469 bp from pter
End:
19,159,176 bp from pter
Size:
31,708 bases
Orientation:
Plus strand

Genomic View for GRAPL Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for GRAPL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GRAPL Gene

No data available for Regulatory Elements for GRAPL Gene

Proteins for GRAPL Gene

  • Protein details for GRAPL Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TC17-GRAPL_HUMAN
    Recommended name:
    GRB2-related adapter protein-like
    Protein Accession:
    Q8TC17
    Secondary Accessions:
    • B2RXI8

    Protein attributes for GRAPL Gene

    Size:
    118 amino acids
    Molecular mass:
    13442 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for GRAPL Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for GRAPL Gene

Proteomics data for GRAPL Gene at MOPED

Post-translational modifications for GRAPL Gene

Other Protein References for GRAPL Gene

No data available for DME Specific Peptides for GRAPL Gene

Domains for GRAPL Gene

Gene Families for GRAPL Gene

HGNC:
  • SH2D :SH2 domain containing

Protein Domains for GRAPL Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

GRAPL_HUMAN
Domain:
  • Contains 1 SH2 domain.:
    • Q8TC17
  • Contains 1 SH3 domain.:
    • Q8TC17
Family:
  • Belongs to the GRB2/sem-5/DRK family.:
    • Q8TC17
genes like me logo Genes that share domains with GRAPL: view

Function for GRAPL Gene

Gene Ontology (GO) - Molecular Function for GRAPL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with GRAPL: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for GRAPL Gene

Localization for GRAPL Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for GRAPL Gene COMPARTMENTS Subcellular localization image for GRAPL gene
Compartment Confidence
cytosol 3
nucleus 2
extracellular 1

No data available for Gene Ontology (GO) - Cellular Components for GRAPL Gene

Pathways for GRAPL Gene

SuperPathways for GRAPL Gene

No Data Available

Interacting Proteins for GRAPL Gene

Gene Ontology (GO) - Biological Process for GRAPL Gene

None

No data available for Pathways by source for GRAPL Gene

Transcripts for GRAPL Gene

mRNA/cDNA for GRAPL Gene

(2) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for GRAPL Gene

GRB2-related adaptor protein-like:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for GRAPL Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b
SP1:
SP2: -

Relevant External Links for GRAPL Gene

GeneLoc Exon Structure for
GRAPL
ECgene alternative splicing isoforms for
GRAPL

Expression for GRAPL Gene

mRNA expression in normal human tissues for GRAPL Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for GRAPL Gene

SOURCE GeneReport for Unigene cluster for GRAPL Gene Hs.661470

genes like me logo Genes that share expressions with GRAPL: view

Orthologs for GRAPL Gene

This gene was present in the common ancestor of animals.

Orthologs for GRAPL Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia GRAP 37
  • 47 (a)
OneToOne
dog
(Canis familiaris)
Mammalia GRAPL 37
  • 39 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 45 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 32 (a)
OneToMany
chicken
(Gallus gallus)
Aves GRAP 37
  • 40 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 37
  • 38 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii grapa 37
  • 32 (a)
ManyToMany
grapb 37
  • 33 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta drk 37
  • 31 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea sem-5 37
  • 27 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.8309 37
  • 27 (a)
OneToMany
Species with no ortholog for GRAPL:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for GRAPL Gene

ENSEMBL:
Gene Tree for GRAPL (if available)
TreeFam:
Gene Tree for GRAPL (if available)

Paralogs for GRAPL Gene

Paralogs for GRAPL Gene

genes like me logo Genes that share paralogs with GRAPL: view

Variants for GRAPL Gene

Sequence variations from dbSNP and Humsavar for GRAPL Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs2019968 -- 19,142,341(-) ctgtt(C/T)cctgt intron-variant
rs2386350 -- 19,149,622(-) CACCA(C/T)GCCCA intron-variant
rs2877889 -- 19,149,323(-) gagac(A/G)gagtc intron-variant
rs3829582 -- 19,147,192(+) AGTGG(C/T)CATCC intron-variant
rs3853544 -- 19,146,536(-) ccttc(C/T)gagta intron-variant

Structural Variations from Database of Genomic Variants (DGV) for GRAPL Gene

Variant ID Type Subtype PubMed ID
nsv9504 CNV Gain+Loss 18304495
nsv833391 CNV Loss 17160897
esv33572 CNV Gain 17666407
nsv907786 CNV Gain 21882294
nsv428336 CNV Gain+Loss 18775914
dgv933e1 CNV Complex 17122850
dgv3082n71 CNV Loss 21882294
nsv7291 OTHER Inversion 18451855
dgv3083n71 CNV Loss 21882294
dgv3084n71 CNV Gain+Loss 21882294
dgv3085n71 CNV Gain 21882294
nsv907805 CNV Gain+Loss 21882294
dgv3086n71 CNV Gain 21882294
esv25927 CNV Gain+Loss 19812545
dgv3087n71 CNV Gain+Loss 21882294
nsv907825 CNV Loss 21882294
dgv3088n71 CNV Loss 21882294
dgv3089n71 CNV Gain 21882294
nsv2001 CNV Loss 18451855
dgv3090n71 CNV Loss 21882294
dgv3091n71 CNV Gain+Loss 21882294
nsv907835 CNV Gain 21882294
nsv907836 CNV Gain+Loss 21882294
dgv3092n71 CNV Gain+Loss 21882294
dgv3093n71 CNV Gain 21882294
dgv3094n71 CNV Loss 21882294
dgv3095n71 CNV Gain 21882294
dgv3096n71 CNV Gain 21882294
nsv907844 CNV Loss 21882294
dgv3097n71 CNV Gain+Loss 21882294
dgv3098n71 CNV Loss 21882294
dgv3099n71 CNV Gain+Loss 21882294
nsv833393 CNV Gain+Loss 17160897
dgv3100n71 CNV Gain 21882294

Relevant External Links for GRAPL Gene

HapMap Linkage Disequilibrium report
GRAPL

Disorders for GRAPL Gene

No disorders were found for GRAPL Gene.

No data available for UniProtKB/Swiss-Prot for GRAPL Gene

Publications for GRAPL Gene

  1. Identification of differential protein expression associated with development of unstable human carotid plaques. (PMID: 16507914) Slevin M. … Gaffney J. (Am. J. Pathol. 2006) 23
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. A COFRADIC protocol to study protein ubiquitination. (PMID: 24816145) Stes E. … Gevaert K. (J. Proteome Res. 2014) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 4

Products for GRAPL Gene

Sources for GRAPL Gene

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