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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

GPRASP2 Gene

protein-coding   GIFtS: 52
GCID: GC0XP101985

G Protein-Coupled Receptor Associated Sorting Protein 2

  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

Aliases
G Protein-Coupled Receptor Associated Sorting Protein 21 2
GASP22
G-Protein Coupled Receptor-Associated Sorting Protein 22
GASP-23

External Ids:    HGNC: 251691   Entrez Gene: 1149282   Ensembl: ENSG000001583017   UniProtKB: Q96D093   

Export aliases for GPRASP2 gene to outside databases

Previous GC identifers: GC0XP101773 GC0XP101853 GC0XP101974 GC0XP091571 GC0XP101977 GC0XP101979


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for GPRASP2 Gene:
The protein encoded by this gene is a member of a family that regulates the activity of G protein-coupled
receptors (GPCRs). The encoded protein has been shown to be capable of interacting with several GPCRs, including
the M1 muscarinic acetylcholine receptor and the calcitonin receptor. Several transcript variants encoding the
same protein have been found for this gene. (provided by RefSeq, May 2010)

GeneCards Summary for GPRASP2 Gene: 
GPRASP2 (G protein-coupled receptor associated sorting protein 2) is a protein-coding gene. Diseases associated with GPRASP2 include autism spectrum disorder, and schizophrenia. An important paralog of this gene is ARMCX1.

UniProtKB/Swiss-Prot: GASP2_HUMAN, Q96D09
Function: May play a role in regulation of a variety of G-protein coupled receptors

Gene Wiki entry for GPRASP2 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000023.10  NC_018934.2  NT_011651.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the GPRASP2 gene promoter:
         AML1a   POU3F1   Egr-1   Nkx2-5   HNF-3beta   NF-kappaB   NF-kappaB2   NF-kappaB1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidGPRASP2 promoter sequence
   Search SABiosciences Chromatin IP Primers for GPRASP2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GPRASP2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: Xq22.1   Ensembl cytogenetic band:  Xq22.1   HGNC cytogenetic band: Xq22.1

GPRASP2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GPRASP2 gene location

GeneLoc information about chromosome X         GeneLoc Exon Structure

GeneLoc location for GC0XP101985:  view genomic region     (about GC identifiers)

Start:
101,967,104 bp from pter      End:
101,973,607 bp from pter
Size:
6,504 bases      Orientation:
plus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: GASP2_HUMAN, Q96D09 (See protein sequence)
Recommended Name: G-protein coupled receptor-associated sorting protein 2  
Size: 838 amino acids; 93773 Da
Subunit: Interacts with cytoplasmic tails of a variety of G-protein coupled receptors such as muscarinic
acetylcholine receptor M1/CHRM1 and calcitonin receptor/CALCR
Secondary accessions: D3DXA0 Q8NAB4

Explore the universe of human proteins at neXtProt for GPRASP2: NX_Q96D09

Explore proteomics data for GPRASP2 at MOPED 

Post-translational modifications:

  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_Q96D09

  • GPRASP2 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    GPRASP2 Protein Expression
    REFSEQ proteins (5 alternative transcripts): 
    NP_001004051.1  NP_001171803.1  NP_001171804.1  NP_001171805.1  NP_612446.1  

    ENSEMBL proteins: 
     ENSP00000339057   ENSP00000437872   ENSP00000437394  

    Human Recombinant Protein Products for GPRASP2: 
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    Browse Sino Biological Recombinant Proteins
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    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for GPRASP2 

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm ----

    GPRASP2 for ontologies           About GeneDecksing



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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    HGNC Gene Families: 
    ARMC: Armadillo repeat containing

    3 InterPro protein domains:
     IPR011989 ARM-like
     IPR006911 ARM-rpt_dom
     IPR016024 ARM-type_fold

    Graphical View of Domain Structure for InterPro Entry Q96D09

    ProtoNet protein and cluster: Q96D09

    UniProtKB/Swiss-Prot: GASP2_HUMAN, Q96D09
    Similarity: Belongs to the GPRASP family


    GPRASP2 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: GASP2_HUMAN, Q96D09
    Function: May play a role in regulation of a variety of G-protein coupled receptors

         Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001540beta-amyloid binding ----
    GO:0005488binding ----
         
    GPRASP2 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for GPRASP2:
     Increased gamma-H2AX phosphory 

    Animal Models:
       inGenious Targeting Laboratory - Custom generated mouse model solutions for GPRASP2 
       inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for GPRASP2

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    SwitchGear 3'UTR luciferase reporter plasmidGPRASP2 3' UTR sequence
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section




    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for GPRASP2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 22)

    5/28 Interacting proteins for GPRASP2 (Q96D092, 3 ENSP000003390574) via UniProtKB, MINT, STRING, and/or I2D (see all 28)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    LRIF1Q5T3J32, 3, ENSP000003587784MINT-3981530 MINT-3980914 I2D: score=2 STRING: ENSP00000358778
    HTTP428582, 3, ENSP000003471844MINT-3978637 I2D: score=3 STRING: ENSP00000347184
    KIAA1377Q9P2H02, 3, ENSP000002634684MINT-3981220 I2D: score=3 STRING: ENSP00000263468
    PTNP212462, 3, ENSP000003411704MINT-3980233 I2D: score=3 STRING: ENSP00000341170
    ARHGEF6Q150522, 3, ENSP000002506174MINT-8249047 I2D: score=2 STRING: ENSP00000250617
    About this table

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for GPRASP2 (GASP2)

    Search CenterWatch for drugs/clinical trials and news about GPRASP2 / GASP2

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for GPRASP2 gene (5 alternative transcripts): 
    NM_001004051.3  NM_001184874.2  NM_001184875.2  NM_001184876.2  NM_138437.5  

    Unigene Cluster for GPRASP2:

    G protein-coupled receptor associated sorting protein 2
    Hs.731996  [show with all ESTs]
    Unigene Representative Sequence: BC051707
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000332262(uc022cay.1) ENST00000483720 ENST00000486814 ENST00000465228
    ENST00000543253(uc022cbe.1 uc004ejl.3 uc022cbf.1 uc004ejk.3)
    ENST00000535209(uc022cbg.1 uc004ejm.3)
    miRNA
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    8/20 QIAGEN miScript miRNA Assays for microRNAs that regulate GPRASP2 (see all 20):
    hsa-miR-579 hsa-miR-640 hsa-miR-1271 hsa-miR-570 hsa-miR-4267 hsa-miR-3122 hsa-miR-9 hsa-miR-7-1*
    SwitchGear 3'UTR luciferase reporter plasmidGPRASP2 3' UTR sequence
    Inhib. RNA
    Products:
         
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat GPRASP2
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat GPRASP2

    Additional mRNA sequence: 

    AK123432.1 AK123832.1 BC036772.1 BC051707.1 

    17 DOTS entries:

    DT.100821795  DT.95265570  DT.121305856  DT.441264  DT.121305769  DT.121305806  DT.121305738  DT.100821796 
    DT.121305623  DT.95327779  DT.102829126  DT.121305622  DT.121305720  DT.121305708  DT.121305744  DT.121305774 
    DT.97845888 

    24/75 AceView cDNA sequences (see all 75):

    AK094646 AI348680 CN483206 AA232892 AI356232 AK092981 AK123832 AL832187 
    AL522674 AI868257 NM_138437 BU163826 AI804295 CF145073 AX747837 BQ029167 
    AA897791 AI094453 AA826397 BC013576 AA906216 BC051707 BC036772 BM680496 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    GPRASP2 expression in normal human tissues (normalized intensities)      GPRASP2 embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: ATTGAGACAT
    GPRASP2 Expression
    About this image


    GPRASP2 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/1 selected tissues (see all 1) fully expand
     
     Blood (Hematopoietic System)
             Hematopoietic Stem Cells Hematopoietic Bone Marrow

    See GPRASP2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for GPRASP2

    SOURCE GeneReport for Unigene cluster: Hs.731996

    UniProtKB/Swiss-Prot: GASP2_HUMAN, Q96D09
    Tissue specificity: Expressed in the brain

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    In Situ
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GPRASP2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for GPRASP2 gene from 4/10 species (see all 10)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Gprasp21 , 5 G protein-coupled receptor associated sorting protein more1, 5 82.46(n)1
    75.46(a)1
      X (57.30 cM)5
    2456071  NM_001163015.11  NP_001156487.11 
     1358390345 
    chicken
    (Gallus gallus)
    Aves --
    --
    21(a)
    1 → many
    1(12726364-12735694)
    lizard
    (Anolis carolinensis)
    Reptilia --
    Uncharacterized protein
    22(a)
    1 → many
    5(95300984-95312074)
    zebrafish
    (Danio rerio)
    Actinopterygii ARMC106
    armadillo repeat containing 10
    17(a)
    1 → many
    25(19368324-19378456)


    ENSEMBL Gene Tree for GPRASP2 (if available)
    TreeFam Gene Tree for GPRASP2 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for GPRASP2 gene
    ARMCX5-GPRASP2  ARMCX12  BHLHB92  ARMCX22  GPRASP12  ARMCX52  ARMCX62  ARMC102  
    ARMCX32  
    1 SIMAP similar gene for GPRASP2 using alignment to 1 protein entry:     GASP2_HUMAN:
    GPRASP1

    GPRASP2 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/83 SNPs in GPRASP2 are shown (see all 83)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr X posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1861813431,2
    --101934529(+) ACAACA/GAAAGA 5 -- us2k10--------
    rs1899001361,2
    --101934646(+) GCAAAA/GAAGAG 5 -- us2k10--------
    rs45219351,2
    C,F,H--101934810(+) aagggC/Attaaa 5 -- us2k1 tfbs35Minor allele frequency- A:0.04NS NA 790
    rs1821593381,2
    --101934870(+) AAAGGG/TTTTCA 5 -- us2k10--------
    rs1405280831,2
    C--101934986(+) TGGATC/TTTGGC 5 -- us2k10--------
    rs1113646251,2
    C,F--101935031(+) TAGACT/CTTCTC 5 -- us2k11Minor allele frequency- C:0.00CSA 1
    rs1866935821,2
    --101935062(+) TGAGTC/GACTGC 5 -- us2k10--------
    rs1926200211,2
    --101935237(+) GTTACC/TTGCCA 5 -- us2k10--------
    rs1838250321,2
    --101935358(+) AAGGAC/GGGGCT 5 -- us2k10--------
    rs1888436401,2
    --101935445(+) GTGCAC/GGGTGG 5 -- us2k10--------

    HapMap Linkage Disequilibrium report for GPRASP2 (101967104 - 101973607 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 1 variation for GPRASP2:    About this table     
    Variant IDTypeSubtypePubMed ID
    nsv526716CNV Gain19592680


    Locus Specific Mutation Databases (LSDB): GPRASP2
    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    2 diseases for GPRASP2:    About MalaCards
    autism spectrum disorder    schizophrenia


    GPRASP2 for disorders           About GeneDecksing


    Export disorders for GPRASP2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for GPRASP2 gene, integrated from 9 sources (see all 18):
    (articles sorted by number of sources associating them with GPRASP2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification of a novel family of G protein-coupled receptor associated sorting proteins. (PubMed id 15086532)1, 2, 3 Simonin F....Kieffer B.L. (2004)
    2. The DNA sequence of the human X chromosome. (PubMed id 15772651)1, 2 Ross M.T.... Bentley D.R. (2005)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    5. A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
    6. A directed protein interaction network for investigat ing intracellular signal transduction. (PubMed id 21900206)1 Vinayagam A....Wanker E.E. (2011)
    7. Toward an understanding of the protein interaction net work of the human liver. (PubMed id 21988832)1 Wang J....Yang X. (2011)
    8. Systematic resequencing of X-chromosome synaptic gene s in autism spectrum disorder and schizophrenia. (PubMed id 20479760)1 Piton A....Rouleau G.A. (2010)
    9. Dynamics of cullin-RING ubiquitin ligase network revea led by systematic quantitative proteomics. (PubMed id 21145461)1 Bennett E.J....Harper J.W. (2010)
    10. Defining the human deubiquitinating enzyme interactio n landscape. (PubMed id 19615732)1 Sowa M.E....Harper J.W. (2009)

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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 114928 HGNC: 25169 AceView: GPRASP2 Ensembl:ENSG00000158301 euGenes: HUgn114928
    ECgene: GPRASP2 H-InvDB: GPRASP2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for GPRASP2 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for GPRASP2 gene:
    Search GeneIP for patents involving GPRASP2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Sirion Biotech, Cell lines from GenScript, and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
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