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Aliases for GPR62 Gene

Aliases for GPR62 Gene

  • G Protein-Coupled Receptor 62 2 3
  • G-Protein Coupled Receptor KPG_005 3 4
  • G-Protein Coupled Receptor GPCR8 3 4
  • HGPCR8 3 4
  • Probable G-Protein Coupled Receptor 62 3
  • KPG_005 3
  • GPCR8 3

External Ids for GPR62 Gene

Previous GeneCards Identifiers for GPR62 Gene

  • GC03P051082
  • GC03P051243
  • GC03P051845
  • GC03P051948
  • GC03P051964

Summaries for GPR62 Gene

GeneCards Summary for GPR62 Gene

GPR62 (G Protein-Coupled Receptor 62) is a Protein Coding gene. Among its related pathways are GPCRs, Other. GO annotations related to this gene include G-protein coupled receptor activity. An important paralog of this gene is GPR61.

UniProtKB/Swiss-Prot for GPR62 Gene

  • Orphan receptor

Gene Wiki entry for GPR62 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPR62 Gene

Genomics for GPR62 Gene

Regulatory Elements for GPR62 Gene

Genomic Location for GPR62 Gene

Start:
51,955,314 bp from pter
End:
51,957,504 bp from pter
Size:
2,191 bases
Orientation:
Plus strand

Genomic View for GPR62 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for GPR62 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GPR62 Gene

Proteins for GPR62 Gene

  • Protein details for GPR62 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZJ7-GPR62_HUMAN
    Recommended name:
    Probable G-protein coupled receptor 62
    Protein Accession:
    Q9BZJ7
    Secondary Accessions:
    • F1DAM4
    • Q5KU27

    Protein attributes for GPR62 Gene

    Size:
    368 amino acids
    Molecular mass:
    37614 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GPR62 Gene

Proteomics data for GPR62 Gene at MOPED

Post-translational modifications for GPR62 Gene

Other Protein References for GPR62 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for GPR62 Gene

Domains for GPR62 Gene

Gene Families for GPR62 Gene

HGNC:
  • GPCRAO :GPCR / Class A : Orphans
IUPHAR :

Protein Domains for GPR62 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for GPR62 Gene

Graphical View of Domain Structure for InterPro Entry

Q9BZJ7

UniProtKB/Swiss-Prot:

GPR62_HUMAN :
  • Q9BZJ7
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with GPR62: view

Function for GPR62 Gene

Molecular function for GPR62 Gene

UniProtKB/Swiss-Prot Function:
Orphan receptor

Gene Ontology (GO) - Molecular Function for GPR62 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
genes like me logo Genes that share ontologies with GPR62: view

Phenotypes for GPR62 Gene

GenomeRNAi human phenotypes for GPR62:
genes like me logo Genes that share phenotypes with GPR62: view

Animal Model Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for GPR62

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for GPR62 Gene

Localization for GPR62 Gene

Subcellular locations from UniProtKB/Swiss-Prot for GPR62 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for GPR62 Gene COMPARTMENTS Subcellular localization image for GPR62 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for GPR62 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
GO:0005886 plasma membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0043235 receptor complex IDA 23382219
genes like me logo Genes that share ontologies with GPR62: view

Pathways for GPR62 Gene

SuperPathways for GPR62 Gene

Superpath Contained pathways
1 GPCRs, Other
genes like me logo Genes that share pathways with GPR62: view

Pathways by source for GPR62 Gene

1 BioSystems pathway for GPR62 Gene

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays
    • G Protein Coupled Receptors 384HT in human,mouse,rat

Interacting Proteins for GPR62 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000319250%0d%0a9606.ENSP00000349238%0d%0a
Selected Interacting proteins: ENSP00000319250 for GPR62 Gene via STRING

Symbol External ID(s) Details
CCDC88B

Gene Ontology (GO) - Biological Process for GPR62 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with GPR62: view

Transcripts for GPR62 Gene

mRNA/cDNA for GPR62 Gene

(3) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for GPR62 Gene

G protein-coupled receptor 62:
Representative Sequences:

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for GPR62

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for GPR62 Gene

No ASD Table

Relevant External Links for GPR62 Gene

GeneLoc Exon Structure for
GPR62
ECgene alternative splicing isoforms for
GPR62

Expression for GPR62 Gene

mRNA expression in normal human tissues for GPR62 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for GPR62 Gene Hs.232213

mRNA Expression by UniProt/SwissProt for GPR62 Gene

Q9BZJ7-GPR62_HUMAN
Tissue specificity: Expressed in brain; detected in the basal forebrain, frontal cortex, caudate, putamen, thalamus and hippocampus
genes like me logo Genes that share expressions with GPR62: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression and Expression partners for GPR62 Gene

Orthologs for GPR62 Gene

This gene was present in the common ancestor of chordates.

Orthologs for GPR62 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia GPR62 35
  • 86.42 (n)
  • 88.76 (a)
GPR62 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia GPR62 35
  • 86.05 (n)
  • 87.36 (a)
GPR62 36
  • 85 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gpr62 35
  • 83.33 (n)
  • 83.62 (a)
Gpr62 16
Gpr62 36
  • 80 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia GPR62 35
  • 99.18 (n)
  • 98.91 (a)
rat
(Rattus norvegicus)
Mammalia Gpr62 35
  • 82.52 (n)
  • 83.95 (a)
oppossum
(Monodelphis domestica)
Mammalia GPR62 36
  • 55 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 32 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii si:dkeyp-111e5.4 36
  • 29 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 16 (a)
OneToMany
Species with no ortholog for GPR62:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for GPR62 Gene

ENSEMBL:
Gene Tree for GPR62 (if available)
TreeFam:
Gene Tree for GPR62 (if available)

Paralogs for GPR62 Gene

Paralogs for GPR62 Gene

genes like me logo Genes that share paralogs with GPR62: view

Variants for GPR62 Gene

Sequence variations from dbSNP and Humsavar for GPR62 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs323871 - 51,956,589(-) CCGCA(C/G)AGGTC missense, reference
rs13068631 -- 51,956,914(+) CCTGC(C/G)GTCTG utr-variant-3-prime
rs17852417 -- 51,956,339(+) CCGCC(A/G)CTCCG synonymous-codon, reference
rs17852418 -- 51,956,346(+) TCCGG(C/T)CTCGC reference, missense
rs28587738 - 51,956,103(+) TCGGC(A/C/G)CGCCG reference, missense

Structural Variations from Database of Genomic Variants (DGV) for GPR62 Gene

Variant ID Type Subtype PubMed ID
nsv520211 CNV Gain 19592680
nsv508922 CNV Insertion 20534489
nsv876780 CNV Loss 21882294
dgv5134n71 CNV Loss 21882294
dgv5135n71 CNV Loss 21882294

Relevant External Links for GPR62 Gene

HapMap Linkage Disequilibrium report
GPR62

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for GPR62 Gene

Disorders for GPR62 Gene

No disorders were found for GPR62 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for GPR62 Gene

Publications for GPR62 Gene

  1. Identification of four novel human G protein-coupled receptors expressed in the brain. (PMID: 11165367) Lee D.K. … O'Dowd B.F. (Brain Res. Mol. Brain Res. 2001) 2 3 4
  2. Identification of G protein-coupled receptor genes from the human genome sequence. (PMID: 12044878) Takeda S. … Mitaku S. (FEBS Lett. 2002) 3 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Structural basis for endosomal trafficking of diverse transmembrane cargos by PX-FERM proteins. (PMID: 23382219) Ghai R. … Collins B.M. (Proc. Natl. Acad. Sci. U.S.A. 2013) 3
  5. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4

Products for GPR62 Gene

Sources for GPR62 Gene

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