GPR55 Gene
protein-coding GIFtS: 54
GCID: GC02M231736
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G protein-coupled receptor 55
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Aliases
for GPR55 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| G Protein-Coupled Receptor 551 2 | | G-Protein Coupled Receptor 552 |
Export aliases for GPR55 gene to outside databasesPrevious GC identifers: GC02M229835 GC02M230503 GC02M231974 GC02M231597 GC02M231480 GC02M223614 |
Summaries
for GPR55 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for GPR55:
Members of the G protein-coupled receptor (GPR) family, such as GPR55, play important roles in signal transduction fromthe external environment to the inside of the cell (Sawzdargo et al., 1999 (PubMed 9931487)).(supplied by OMIM, Apr2008)
UniProtKB/Swiss-Prot: GPR55_HUMAN, Q9Y2T6Function: May be involved in hyperalgesia associated with inflammatory and neuropathic pain (By similarity). Receptorfor L-alpha-lysophosphatidylinositol (LPI). LPI induces Ca(2+) release from intracellular stores via theheterotrimeric G protein GNA13 and RHOA. Putative cannabinoid receptor. May play a role in bone physiology byregulating osteoclast number and function
 summary
for GPR55: GPR55 receptors are non-CB1/CB2 receptors that exhibit affinity for endogenous, plant and synthetic
cannabinoids. Originally designated an orphan receptor, GPR55 is now thought to be a functional receptor
mediating the effects of ligands known to be inactive at CB1 and CB2, e.g. palmitoylethanolamide. GPR55
couples to Galpha13 and can mediate activation of the small G proteins rhoA, cdc42 and rac1. GPR55 mRNA is
expressed in the brain, most abundantly in the caudate nucleus and putamen, with lesser levels in the
hippocampus, thalamus, pons, cerebellum and frontal cortex. Peripherally, GPR55 mRNA is present in the
spleen, adrenals and parts of the gastrointestinal tract. Putative physiological roles of GPR55 include pain
signaling, control of vascular tone and inflammation. The human GPR55 receptor gene is localized to
chromosome 2q36.3.
Gene Wiki entry for GPR55
|
Genomic Views
for GPR55 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000002.11 NC_018913.1 NT_005403.17
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the GPR55 gene promoter:
c-Fos AP-1 AML1a JunB Fra-1 FosB MEF-2A JunD c-Myb c-Jun
Other transcription factors
Search SABiosciences Chromatin IP Primers for GPR55
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GPR55 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 2q37 Ensembl cytogenetic band: 2q37.1 HGNC cytogenetic band: 2q37GPR55 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 2 GeneLoc Exon Structure GeneLoc location for GC02M231736: view genomic region
(about GC identifiers)
Start:
|
231,772,033 bp from pter |
End:
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231,825,781 bp from pter |
Size:
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53,749 bases |
Orientation:
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minus strand |
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Proteins
for GPR55 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: GPR55_HUMAN, Q9Y2T6 (See
protein sequence)Recommended Name: G-protein coupled receptor 55 Size: 319 amino acids; 36637 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Miscellaneous: The classification of this protein as a cannabinoid receptor remains a contentious issue due toconflicting pharmacological results
Sequence caution: Sequence=AAD22410.1; Type=Frameshift; Positions=132, 142;
Secondary accessions: Q8N580Explore the universe of human proteins at neXtProt for GPR55: NX_Q9Y2T6
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q9Y2T6
GPR55 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_005674.2
ENSEMBL proteins: ENSP00000410267 ENSP00000375893 ENSP00000412768 ENSP00000375894 Reactome Protein details: Q9Y2T6
Human Recombinant Protein Products:
Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view): About this table
GPR55 for ontologies About GeneDecksing
GPR55 Antibody Products:
Assay Products for GPR55: |
Protein
Domains /
Families
for GPR55 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
GPR55 for domains About GeneDecksing
2 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q9Y2T6ProtoNet protein and cluster: Q9Y2T6 UniProtKB/Swiss-Prot: GPR55_HUMAN, Q9Y2T6Similarity: Belongs to the G-protein coupled receptor 1 family |
Function
for GPR55 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: GPR55_HUMAN, Q9Y2T6Function: May be involved in hyperalgesia associated with inflammatory and neuropathic pain (By similarity). Receptorfor L-alpha-lysophosphatidylinositol (LPI). LPI induces Ca(2+) release from intracellular stores via theheterotrimeric G protein GNA13 and RHOA. Putative cannabinoid receptor. May play a role in bone physiology byregulating osteoclast number and function Genatlas biochemistry entry for GPR55:G protein coupled receptor 55,highly expressed in the caudate nucleus and putamen with homology toP2RY5,GPR23,GPR35,CCR4
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for GPR55 (see all 2)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for GPR55
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
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Synthesis Service for GPR55 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GPR55 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GPR55 |
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table
GPR55 for ontologies About GeneDecksing
Animal Models:
Mouse knock-outs for GPR55: Gpr55tm1Lex Gpr55tm1.1Mijr Gpr55tm1Tigm
7 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Gpr55):
GPR55 for phenotypes About GeneDecksing
|
Pathways & Interactions
for GPR55 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Class A/1 (Rhodopsin-like receptors) | | | 2 | Signaling by GPCR | | | 3 | GPCRs, Other | |
Pathway sources
See GeneCards unified pathways
Show all pathways
1  BioSystems Pathway for GPR55
5/6 
Reactome Pathways for GPR55 (see all 6)
GPR55 for pathways About GeneDecksing
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for GPR55
STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)
5/143 Interacting proteins for GPR55 (ENSP000003758934) via UniProtKB, MINT, STRING, and/or I2D (see all 143)About this table
Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7): About this table
GPR55 for ontologies About GeneDecksing
|
Drugs & Compounds
for GPR55 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
Compounds for GPR55 available from Tocris Bioscience About this table
| Compound | Action |
CAS
# |
|---|
| O-1602 | Potent GPR55 receptor agonist | [317321-41-8] | | Abn-CBD | Selective GPR55 agonist; neurobehaviorally inactive | [22972-55-0] | | Oleylethanolamide | GPR55 agonist. Also PPARalpha agonist | [111-58-0] | | Noladin ether | Endogenous agonist for CB1 and GPR55 | [222723-55-9] | | Palmitoylethanolamide | Selective GPR55 agonist. FAAH and PAA substrate | [544-31-0] |
Search CenterWatch for drugs/clinical trials and news about GPR55
|
Transcripts
for GPR55 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for GPR55 gene: NM_005683.3 Unigene Cluster for GPR55: G protein-coupled receptor 55 Hs.114545 [show with all ESTs]Unigene Representative Sequence: NM_0056834 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000444078(uc002vrf.3 uc010fxs.1) ENST00000392039 ENST00000438398
ENST00000392040(uc002vrg.3)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for GPR55 (see all 2)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for GPR55
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: GPR55 (NM_005683) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for GPR55 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GPR55 |
Additional cDNA sequence: AK292223.1 BC032694.1 CR541776.1 FJ348259.1 5 DOTS entries: DT.40225833 DT.308450 DT.100009397 DT.121016254 DT.97806725 21 AceView cDNA sequences: BC032694 AW136557 NM_005683 AW136559 AA034005 AV690424 AA352856 CR541776 AA033905 BI836584 AA778763 BF056844 N58443 AV686713 AI205505 AL703806 BQ710959 AI825790 AI918782 AI699536 AI631719
GeneLoc Exon Structure
|
Expression
for GPR55 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| GPR55 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: TGATGCCTTG
About this image
See GPR55 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for GPR55
SOURCE GeneReport for Unigene cluster: Hs.114545
UniProtKB/Swiss-Prot: GPR55_HUMAN, Q9Y2T6Tissue specificity: Expressed in the caudate nucleus and putamen, but not detected in the hippocampus, thalamus, ponscerebellum, frontal cortex of the brain or in the liver. Expressed in osteoclasts and osteoblasts
SABiosciences Expression via Pathway-Focused PCR Array including GPR55: | G Protein Coupled Receptors 384HT in human mouse rat |
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for GPR55
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat GPR55 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat GPR55 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat GPR55 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GPR55 |
Orthologs
for GPR55 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of chordates.
Orthologs for GPR55 gene from 2/9 species (see all 9) About this table
ENSEMBL Gene Tree for GPR55 (if available)
TreeFam Gene Tree for GPR55 (if available) |
Paralogs
for GPR55 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for GPR55 gene
- GPR352
7 SIMAP similar genes for GPR55 using alignment to 3 protein entries: GPR55_HUMAN (see all proteins):LPAR4 KPG_007 KPG_010 LPAR5 GPR35 LPAR6
P2RY5
GPR55 for paralogs About GeneDecksing
|
Genomic Variants
for GPR55 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 2 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for GPR55 (231772033 - 231825781 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for GPR55: --
Human Gene Mutation Database (HGMD): GPR55
| SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing GPR55 |
|
Disorders
/ Diseases
for GPR55 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
GPR55 for disorders About GeneDecksing
OMIM gene information: 604107
OMIM disorders: --
1  disease for GPR55: About MalaCardsanorexia nervosa
Human Genome Epidemiology (HuGE) Navigator: GPR55 (4 documents)
Export disorders for GPR55 gene to outside databases
|
Publications
for GPR55 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for GPR55 gene, integrated from 9 sources (see all 25):
(articles sorted by number of sources associating them with GPR55) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Identification and cloning of three novel human G protein-coupled receptor genes GPR52, PsiGPR53 and GPR55: GPR55 is extensively expressed in human brain. (PubMed id 9931487)1, 2, 3 Sawzdargo M.... O'Dowd B.F. (1999)
- The GPR55 ligand L-alpha-lysophosphatidylinositol promotes RhoA- dependent Ca2+ signaling and NFAT activation. (PubMed id 18757503)1, 2, 9 Henstridge C.M....Irving A.J. (2009)
- The putative cannabinoid receptor GPR55 affects osteoclast function in vitro and bone mass in vivo. (PubMed id 19805329)1, 2 Whyte L.S.... Rogers M.J. (2009)
- Atypical responsiveness of the orphan receptor GPR55 to cannabinoid ligands. (PubMed id 19723626)1, 2 Kapur A....Abood M.E. (2009)
- Identification of GPR55 as a lysophosphatidylinositol receptor. (PubMed id 17765871)1, 2 Oka S.... Sugiura T. (2007)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- The L-a-lysophosphatidylinositol/GPR55 system and its potential role in human obesity. (PubMed id 22179809)1 Moreno-Navarrete J.M....Nogueiras R. (2012)
- The GPCR-associated sorting protein 1 regulates ligand -induced down-regulation of GPR55. (PubMed id 21718301)1 Kargl J....Waldhoer M. (2012)
- Lysophosphatidylinositol signalling: new wine from an old bottle. (PubMed id 22285325)1 Pineiro R. and Falasca M. (2012)
- New blood brothers: the GPR55 and CB2 partnership. (PubMed id 21537344)1 Irving A. (2011)
|
External Searches for GPR55 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing GPR55 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing GPR55 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing GPR55 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for GPR55 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for GPR55 gene:
Search GeneIP for patents involving GPR55
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for GPR55 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat GPR55 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing GPR55 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GPR55 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat GPR55 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat GPR55 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat GPR55 |
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| | | | Tocris compounds for GPR55 |
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 | | | GPR55 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GPR55 |
|  |  |  | | | | ThermoFisher Antibodies for GPR55 |
| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GPR55 |
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