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Aliases for GPR33 Gene

Aliases for GPR33 Gene

  • G Protein-Coupled Receptor 33 (Gene/Pseudogene) 2 3 5
  • G Protein-Coupled Receptor 33, Pseudogene 2
  • G Protein-Coupled Receptor 33 Pseudogene 2
  • G Protein-Coupled Receptor 33 2

External Ids for GPR33 Gene

Previous GeneCards Identifiers for GPR33 Gene

  • GC14U990024
  • GC14M029943
  • GC14M029945
  • GC14M029946
  • GC14M031021
  • GC14M031953
  • GC14M012069

Summaries for GPR33 Gene

Entrez Gene Summary for GPR33 Gene

  • This gene has been identified as an orphan chemoattractant G-protein-coupled receptors (GPCR) pseudogene. Studies have shown that the inactivated gene is present as the predominant allele in the human population. A small fraction of the human population has been found to harbor an intact allele.[provided by RefSeq, Oct 2010]

GeneCards Summary for GPR33 Gene

GPR33 (G Protein-Coupled Receptor 33 (Gene/Pseudogene)) is a Protein Coding gene. GO annotations related to this gene include G-protein coupled receptor activity. An important paralog of this gene is FPR2.

UniProtKB/Swiss-Prot for GPR33 Gene

  • Orphan receptor; could be a chemoattractant receptor.

Gene Wiki entry for GPR33 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPR33 Gene

Genomics for GPR33 Gene

Regulatory Elements for GPR33 Gene

Enhancers for GPR33 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around GPR33 on UCSC Golden Path with GeneCards custom track

Genomic Location for GPR33 Gene

Chromosome:
14
Start:
31,482,944 bp from pter
End:
31,487,945 bp from pter
Size:
5,002 bases
Orientation:
Minus strand

Genomic View for GPR33 Gene

Genes around GPR33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GPR33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GPR33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GPR33 Gene

Proteins for GPR33 Gene

  • Protein details for GPR33 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q49SQ1-GPR33_HUMAN
    Recommended name:
    Probable G-protein coupled receptor 33
    Protein Accession:
    Q49SQ1

    Protein attributes for GPR33 Gene

    Size:
    333 amino acids
    Molecular mass:
    38232 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GPR33 Gene

Proteomics data for GPR33 Gene at MOPED

Post-translational modifications for GPR33 Gene

  • Glycosylation at Asn 5, Asn 12, Asn 19, and Asn 272
  • Modification sites at PhosphoSitePlus

Other Protein References for GPR33 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for GPR33 Gene

Domains & Families for GPR33 Gene

Gene Families for GPR33 Gene

Protein Domains for GPR33 Gene

Suggested Antigen Peptide Sequences for GPR33 Gene

Graphical View of Domain Structure for InterPro Entry

Q49SQ1

UniProtKB/Swiss-Prot:

GPR33_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with GPR33: view

Function for GPR33 Gene

Molecular function for GPR33 Gene

GENATLAS Biochemistry:
G protein coupled receptor 33,chemoattractant related receptor,pseudogene
UniProtKB/Swiss-Prot Function:
Orphan receptor; could be a chemoattractant receptor.

Phenotypes for GPR33 Gene

MGI mutant phenotypes for GPR33:
inferred from 1 alleles
GenomeRNAi human phenotypes for GPR33:
genes like me logo Genes that share phenotypes with GPR33: view

Animal Models for GPR33 Gene

MGI Knock Outs for GPR33:

Animal Model Products

  • Taconic Biosciences Mouse Models for GPR33

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for GPR33 Gene

Localization for GPR33 Gene

Subcellular locations from UniProtKB/Swiss-Prot for GPR33 Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for GPR33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
genes like me logo Genes that share ontologies with GPR33: view

No data available for Subcellular locations from COMPARTMENTS for GPR33 Gene

Pathways & Interactions for GPR33 Gene

SuperPathways for GPR33 Gene

No Data Available

Interacting Proteins for GPR33 Gene

Gene Ontology (GO) - Biological Process for GPR33 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GPR33 Gene

Drugs & Compounds for GPR33 Gene

No Compound Related Data Available

Transcripts for GPR33 Gene

mRNA/cDNA for GPR33 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GPR33 Gene

No ASD Table

Relevant External Links for GPR33 Gene

GeneLoc Exon Structure for
GPR33
ECgene alternative splicing isoforms for
GPR33

Expression for GPR33 Gene

mRNA expression in normal human tissues for GPR33 Gene

SOURCE GeneReport for Unigene cluster for GPR33 Gene Hs.727479

mRNA Expression by UniProt/SwissProt for GPR33 Gene

Q49SQ1-GPR33_HUMAN
Tissue specificity: Expressed in spleen, lung, heart, liver, kidney, pancreas, thymus, gonads and leukocytes.
genes like me logo Genes that share expression patterns with GPR33: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for GPR33 Gene

Orthologs for GPR33 Gene

This gene was present in the common ancestor of chordates.

Orthologs for GPR33 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia GPR33 35
  • 83.63 (n)
  • 74.1 (a)
GPR33 36
  • 72 (a)
OneToOne
dog
(Canis familiaris)
Mammalia GPR33 35
  • 85.7 (n)
  • 77.04 (a)
GPR33 36
  • 75 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gpr33 35
  • 79.82 (n)
  • 72.29 (a)
Gpr33 16
Gpr33 36
  • 71 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia GPR33 35
  • 99.3 (n)
  • 99.4 (a)
GPR33 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Gpr33 35
  • 76.6 (n)
  • 66.56 (a)
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 27 (a)
OneToMany
-- 36
  • 38 (a)
OneToMany
-- 36
  • 36 (a)
OneToMany
-- 36
  • 36 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC101731186 35
  • 52.09 (n)
  • 42.37 (a)
zebrafish
(Danio rerio)
Actinopterygii CABZ01029332.1 36
  • 23 (a)
ManyToMany
CABZ01029333.1 36
  • 25 (a)
ManyToMany
CABZ01029334.1 36
  • 24 (a)
ManyToMany
si:ch211-137j23.7 36
  • 27 (a)
ManyToMany
si:ch211-171h4.6 36
  • 24 (a)
ManyToMany
si:dkey-211g8.1 36
  • 23 (a)
ManyToMany
Species with no ortholog for GPR33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for GPR33 Gene

ENSEMBL:
Gene Tree for GPR33 (if available)
TreeFam:
Gene Tree for GPR33 (if available)

Paralogs for GPR33 Gene

Paralogs for GPR33 Gene

(16) SIMAP similar genes for GPR33 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with GPR33: view

Variants for GPR33 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for GPR33 Gene

Q49SQ1-GPR33_HUMAN
In most individuals a nonsense mutation transforms the Arg-140 into a premature stop codon. Out of 1217 individuals, 1166 had a stop codon in both alleles, 50 were heterozygous and only one (in the Philippines) had Arg-140 in both alleles. GPR33 has undergone independent pseudogenization in human, chimpanzee, orangutan, siamang and rat. This selective inactivation may be due to its interaction with a putative pathogen that could use GPR33 as a receptor for cell invasion.

Sequence variations from dbSNP and Humsavar for GPR33 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1124859 -- 31,486,181(+) gcagc(A/G)tggaa intron-variant
rs1124860 -- 31,486,346(+) CTCCC(A/T)CCTCA intron-variant
rs12883408 -- 31,487,462(+) TCAGA(C/T)GGAGT intron-variant
rs12889743 -- 31,484,835(+) ACATA(A/C)CAGTA intron-variant
rs12890583 -- 31,485,292(+) AAGTC(A/C)CCAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for GPR33 Gene

Variant ID Type Subtype PubMed ID
nsv456198 CNV Loss 19166990

Relevant External Links for GPR33 Gene

HapMap Linkage Disequilibrium report
GPR33
Human Gene Mutation Database (HGMD)
GPR33

No data available for Variation tolerance for GPR33 Gene

Disorders for GPR33 Gene

Relevant External Links for GPR33

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
GPR33

No disorders were found for GPR33 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GPR33 Gene

Publications for GPR33 Gene

  1. The rise and fall of the chemoattractant receptor GPR33. (PMID: 15987686) Roempler H. … Schoeneberg T. (J. Biol. Chem. 2005) 3 4 67
  2. Cloning genes encoding receptors related to chemoattractant receptors. (PMID: 9653656) Marchese A. … O'Dowd B.F. (Genomics 1998) 2 3
  3. Involvement of the chemokine-like receptor GPR33 in innate immunity. (PMID: 20399748) Bohnekamp J. … Schoneberg T. (Biochem. Biophys. Res. Commun. 2010) 3

Products for GPR33 Gene

Sources for GPR33 Gene

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