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GPR19 Gene

protein-coding   GIFtS: 52
GCID: GC12M012813

G Protein-Coupled Receptor 19

  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
G Protein-Coupled Receptor 191 2
GPR-NGA2 3
Probable G-Protein Coupled Receptor 192

External Ids:    HGNC: 44731   Entrez Gene: 28422   Ensembl: ENSG000001831507   OMIM: 6029275   UniProtKB: Q157603   

Export aliases for GPR19 gene to outside databases

Previous GC identifers: GC12M012541 GC12M012958 GC12M012714 GC12M012705


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for GPR19 Gene:
GPR19 (G protein-coupled receptor 19) is a protein-coding gene. Diseases associated with GPR19 include systemic lupus erythematosus, and lupus erythematosus. GO annotations related to this gene include G-protein coupled receptor activity. An important paralog of this gene is CCKBR.

UniProtKB/Swiss-Prot: GPR19_HUMAN, Q15760
Function: Orphan receptor

Gene Wiki entry for GPR19 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence:
NC_000012.12  NC_018923.2  NT_009714.18  
Regulatory elements:
   Regulatory transcription factor binding sites in the GPR19 gene promoter:
         AP-1   ATF-2   MyoD   GATA-1   AREB6   FOXO4   FOXO1a   c-Jun   FOXO1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidGPR19 promoter sequence
   Search Chromatin IP Primers for GPR19

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat GPR19


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12p12.3   Ensembl cytogenetic band:  12p13.1   HGNC cytogenetic band: 12p12.3

GPR19 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GPR19 gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12M012813:  view genomic region     (about GC identifiers)

Start:
12,813,825 bp from pter      End:
12,849,141 bp from pter
Size:
35,317 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
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UniProtKB/Swiss-Prot: GPR19_HUMAN, Q15760 (See protein sequence)
Recommended Name: Probable G-protein coupled receptor 19  
Size: 415 amino acids; 47687 Da

Explore the universe of human proteins at neXtProt for GPR19: NX_Q15760

Explore proteomics data for GPR19 at MOPED

Post-translational modifications: 

  • Glycosylation2 at Asn25, Asn52
  • Modification sites at PhosphoSitePlus

  • See GPR19 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_006134.1  
    ENSEMBL proteins: 
     ENSP00000441832   ENSP00000441963   ENSP00000333744  

    GPR19 Human Recombinant Protein Products:

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    Cloud-Clone Corp. CLIAs for GPR19


    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    HGNC Gene Families:
    GPCRAO: GPCR / Class A : Orphans

    IUPHAR Guide to PHARMACOLOGY protein family classification: GPR19
    Class A Orphans

    2 InterPro protein domains:
     IPR017452 GPCR_Rhodpsn_7TM
     IPR000276 GPCR_Rhodpsn

    Graphical View of Domain Structure for InterPro Entry Q15760

    ProtoNet protein and cluster: Q15760

    UniProtKB/Swiss-Prot: GPR19_HUMAN, Q15760
    Similarity: Belongs to the G-protein coupled receptor 1 family


    GPR19 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:

         UniProtKB/Swiss-Prot Summary: GPR19_HUMAN, Q15760
    Function: Orphan receptor

         Genatlas biochemistry entry for GPR19:
    G protein coupled receptor 19,with strong homology with D2 dopamine and adregenic receptors,expressed in caudate
    nucleus,putamen and thalamus,involved in cancer cells

         Gene Ontology (GO): 1 molecular function term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004930G-protein coupled receptor activity IEA--
         
    GPR19 for ontologies           About GeneDecksing


    Phenotypes:
         1 MGI mutant phenotype (inferred from 2 alleles(MGI details for Gpr19):
     behavior/neurological 

    GPR19 for phenotypes           About GeneDecksing

    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for GPR19
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       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for GPR19
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for GPR19

    miRNA
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    miRTarBase miRNAs that target GPR19:
    hsa-mir-7-5p (MIRT025726), hsa-mir-192-5p (MIRT026563), hsa-mir-215-5p (MIRT024505)

    Block miRNA regulation of human, mouse, rat GPR19 using miScript Target Protectors
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    Predesigned siRNA for gene silencing in human, mouse, rat GPR19

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    Sino Biological Human cDNA Clone for GPR19
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GPR19

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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GPR19


    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    GPR19_HUMAN, Q15760: Cell membrane; Multi-pass membrane protein
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    plasma membrane5
    nucleus1

    Gene Ontology (GO): 2 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005887integral component of plasma membrane TAS8830667
    GO:0016021integral component of membrane ----

    GPR19 for ontologies           About GeneDecksing


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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    SuperPaths for GPR19 About    
    See pathways by source

    SuperPathContained pathways About
    1Peptide ligand-binding receptors
    GPCRs, Class A Rhodopsin-like0.43


    1 BioSystems Pathway for GPR19
        GPCRs, Class A Rhodopsin-like



        Pathway & Disease-focused RT2 Profiler PCR Array including GPR19: 
              G Protein Coupled Receptors 384HT in human mouse rat

    Interactions:

        Search GeneGlobe Interaction Network for GPR19

    Gene Ontology (GO): 1 biological process term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007186G-protein coupled receptor signaling pathway TAS8830667

    GPR19 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for GPR19



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
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    REFSEQ mRNAs for GPR19 gene: 
    NM_006143.2  

    Unigene Cluster for GPR19:

    G protein-coupled receptor 19
    Hs.657862  [show with all ESTs]
    Unigene Representative Sequence: AK096388
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000540510(uc001rar.3) ENST00000540796 ENST00000545876 ENST00000537507(uc001ras.1)
    ENST00000332427(uc001raq.2)
    miRNA
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    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: GPR19 (NM_006143)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GPR19
    Primer
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    OriGene qPCR primer pairs and template standards for GPR19
    OriGene qSTAR qPCR primer pairs in human, mouse for GPR19
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat GPR19
      QuantiTect SYBR Green Assays in human, mouse, rat GPR19
      QuantiFast Probe-based Assays in human, mouse, rat GPR19

    Additional mRNA sequence: 

    AK074729.1 AK096388.1 BC150599.1 CR456832.1 JQ308175.1 

    3 DOTS entries:

    DT.100014178  DT.99935816  DT.121199234 

    15 AceView cDNA sequences:

    NM_006143 AK074729 BE765849 AW452113 BE766068 CR456832 BU193715 AK096388 
    BI092957 BX097998 AI653213 H07970 H07878 AI650365 BF057219 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    GPR19 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: --
    GPR19 Expression
    About this image


    GPR19 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database
     selected tissues (see all 3) fully expand
     
     Inner Cell Mass (Early Embryonic Tissues)    fully expand to see all 5 entries
             hIPS1
     
     NULL (Uncategorized)
             Vascular endothelial growth factor-induced cells
     
     Testis (Reproductive System)
    GPR19 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    GPR19 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.657862

    UniProtKB/Swiss-Prot: GPR19_HUMAN, Q15760
    Tissue specificity: Abundant expression in the brain

        Pathway & Disease-focused RT2 Profiler PCR Array including GPR19: 
              G Protein Coupled Receptors 384HT in human mouse rat

    Primer
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GPR19

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of animals.

    Orthologs for GPR19 gene from Selected species (see all 11)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Gpr191 , 5 G protein-coupled receptor 191, 5 83.05(n)1
    89.4(a)1
      6 (65.77 cM)5
    147601  NM_001167697.21  NP_001161169.11 
     1348691085 
    chicken
    (Gallus gallus)
    Aves GPR196
    G protein-coupled receptor 19
    74(a)
    1 ↔ 1
    1(72156810-72166175)
    lizard
    (Anolis carolinensis)
    Reptilia GPR196
    G protein-coupled receptor 19
    75(a)
    1 ↔ 1
    GL343579.1(442519-443739)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia gpr191 G protein-coupled receptor 19 66.43(n)
    70.53(a)
      548962  NM_001016208.2  NP_001016208.1 
    zebrafish
    (Danio rerio)
    Actinopterygii zgc639122 similar to G protein-coupled receptor 19 75.63(n)   393969  BC053145.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta TrissinR6
    Trissin receptor
    12(a)
    many ↔ many
    2L(5824794-5856767)
    worm
    (Caenorhabditis elegans)
    Secernentea npr-106
    npr-36
    (see all 9)
    Protein NPR-3 (npr-3) mRNA, complete cds
    (see all 9)
    20(a)
    18(a)
    (see all 9)
    1 ↔ many
    1 ↔ many
    (see all 9)
    X(13018848-13022023) WBGene00008278
    IV(11459992-11463195) WBGene00007006


    ENSEMBL Gene Tree for GPR19 (if available)
    TreeFam Gene Tree for GPR19 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for GPR19 gene
    CCKBR2  CCKAR2  
    5 SIMAP similar genes for GPR19 using alignment to 4 protein entries:     GPR19_HUMAN (see all proteins):
    DRD3    ADORA2A    GIR    DRD2    hA2aR

    GPR19 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for GPR19 (see all 711)    About this table    
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1180251541,2
    C,F--12682589(+) GAAAGA/GGCAAG 1 -- ds50011Minor allele frequency- G:0.06EA 120
    rs1480747401,2
    --12682719(+) GTTACC/TTGGAG 1 -- ds50010--------
    rs79782721,2
    C,A--12682732(+) AGGTAA/TCGTGA 1 -- ds50015Minor allele frequency- T:0.40NA WA EA 362
    rs79636531,2
    C,A--12682733(+) GGTAAC/AGTGAC 1 -- ds50015Minor allele frequency- A:0.40NA WA EA 362
    rs1177416901,2
    C,F--12682817(+) GGGATT/ATCATT 1 -- ds50011Minor allele frequency- A:0.07NA 120
    rs763655971,2
    C,F--12682904(+) TAATCA/GAAGAC 1 -- ds50013Minor allele frequency- G:0.05CSA WA EA 240
    rs740617351,2
    C,F--12683072(+) AAACCC/TACAAA 1 -- ds50011Minor allele frequency- T:0.50WA 2
    rs1152203821,2
    C,F--12683147(+) AACAAA/GTATGT 1 -- ut311Minor allele frequency- G:0.02WA 118
    rs1843582661,2
    C--12683173(+) TTATAA/GTTAAA 1 -- ut310--------
    rs617339421,2
    C--12683238(+) ATTTGG/TTGGAT 2 T P mis11Minor allele frequency- T:0.01NS 72

    HapMap Linkage Disequilibrium report for GPR19 (12813825 - 12849141 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 4 variations for GPR19:    About this table    
    Variant IDTypeSubtypePubMed ID
    esv2745567CNV Deletion23290073
    nsv509456CNV Insertion20534489
    dgv89n21CNV Gain19592680
    nsv898811CNV Gain21882294

    Site Specific Mutation Identification with PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    OMIM gene information: 602927    OMIM disorders: --

    3 diseases for GPR19:    
    About MalaCards
    systemic lupus erythematosus    lupus erythematosus    lung cancer


    GPR19 for disorders           About GeneDecksing


    Export disorders for GPR19 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for GPR19 gene, integrated from 10 sources (see all 11):
    (articles sorted by number of sources associating them with GPR19)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A novel gene codes for a putative G protein-coupled receptor with an abundant expression in brain. (PubMed id 8830667)1, 2 O'Dowd B.F.... George S.R. (FEBS Lett. 1996)
    2. Pathway Analysis of ChIP-Seq-Based NRF1 Target Genes Suggests a Logical Hypothesis of their Involvement in the Pathogenesis of Neurodegenerative Diseases. (PubMed id 24250222)1 Satoh J....Yamamoto Y. (Gene Regul Syst Bio 2013)
    3. Meta-analysis followed by replication identifies loci in or near CDKN1B, TET3, CD80, DRAM1, and ARID5B as associated with systemic lupus erythematosus in Asians. (PubMed id 23273568)1 Yang W....Lau Y.L. (Am. J. Hum. Genet. 2013)
    4. Expression of G protein-coupled receptor 19 in human lung cancer cells is triggered by entry into S-phase and supports G(2)-M cell-cycle progression. (PubMed id 22912338)1 Kastner S....Sommergruber W. (Mol. Cancer Res. 2012)
    5. Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348)1 Barbe L....Andersson-Svahn H. (amp 2008)
    6. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (Genome Res. 2006)
    7. The finished DNA sequence of human chromosome 12. (PubMed id 16541075)2 Scherer S.E.... Gibbs R.A. (Nature 2006)
    8. Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PubMed id 16303743)1 Otsuki T....Isogai T. (DNA Res. 2005)
    9. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1 Ota T.... Sugano S. (Nat. Genet. 2004)
    10. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 2842 HGNC: 4473 AceView: GPR19 Ensembl:ENSG00000183150 euGenes: HUgn2842
    ECgene: GPR19 H-InvDB: GPR19

    (According to HUGE)
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    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for GPR19 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for GPR19 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for GPR19 gene:
    Search GeneIP for patents involving GPR19

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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