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GPR155 Gene

protein-coding   GIFtS: 47
GCID: GC02M175296

G Protein-Coupled Receptor 155

  See related disease
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
G Protein-Coupled Receptor 1551 2
PGR222 3
G-Protein Coupled Receptor PGR222 3
DEP.72
DEPDC32
Integral Membrane Protein GPR1552

External Ids:    HGNC: 229511   Entrez Gene: 1515562   Ensembl: ENSG000001633287   UniProtKB: Q7Z3F13   

Export aliases for GPR155 gene to outside databases

Previous GC identifers: GC02M175500 GC02M175124 GC02M175004 GC02M167176


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for GPR155 Gene:
GPR155 (G protein-coupled receptor 155) is a protein-coding gene. Diseases associated with GPR155 include malaria.

Gene Wiki entry for GPR155 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence:
NC_000002.12  NT_005403.18  NC_018913.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the GPR155 gene promoter:
         Olf-1   RelA   NF-kappaB   GATA-1   Evi-1   NF-AT2   FOXJ2 (long isoform)   FOXJ2   NF-kappaB1   NF-AT1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidGPR155 promoter sequence
   Search Chromatin IP Primers for GPR155

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat GPR155


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q31.1   Ensembl cytogenetic band:  2q31.1   HGNC cytogenetic band: 2q31.1

GPR155 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GPR155 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M175296:  view genomic region     (about GC identifiers)

Start:
175,296,375 bp from pter      End:
175,351,822 bp from pter
Size:
55,448 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: GP155_HUMAN, Q7Z3F1 (See protein sequence)
Recommended Name: Integral membrane protein GPR155  
Size: 870 amino acids; 96919 Da
Sequence caution: Sequence=BAB71170.1; Type=Erroneous initiation;
Secondary accessions: B2RCI2 D3DPE2 Q4G0Y6 Q53SJ3 Q53TA8 Q69YG8 Q86SP9 Q8N261 Q8N639 Q8N8K3
Q96MV6

Explore the universe of human proteins at neXtProt for GPR155: NX_Q7Z3F1

Explore proteomics data for GPR155 at MOPED

Post-translational modifications: 

  • Glycosylation2 at Asn9, Asn15, Asn29, Asn198, Asn309, Asn381, Asn543, Asn612
  • Modification sites at PhosphoSitePlus

  • See GPR155 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins (4 alternative transcripts): 
    NP_001028217.1  NP_001253979.1  NP_001253980.1  NP_689742.4  

    ENSEMBL proteins: 
     ENSP00000376335   ENSP00000376334   ENSP00000295500  

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    3 InterPro protein domains:
     IPR004776 Auxin_eff
     IPR011991 WHTH_DNA-bd_dom
     IPR000591 DEP_dom

    Graphical View of Domain Structure for InterPro Entry Q7Z3F1

    ProtoNet protein and cluster: Q7Z3F1

    1 Blocks protein domain: IPB004776 Auxin Efflux Carrier

    UniProtKB/Swiss-Prot: GP155_HUMAN, Q7Z3F1
    Similarity: Contains 1 DEP domain


    GPR155 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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         Gene Ontology (GO): 1 molecular function term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003674molecular_function ND--
         
    GPR155 for ontologies           About GeneDecksing


    Animal Models:
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    miRNA
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    Selected qRT-PCR Assays for microRNAs that regulate GPR155 (see all 58):
    hsa-miR-548j hsa-miR-579 hsa-miR-640 hsa-miR-361-5p hsa-miR-548k hsa-miR-3653 hsa-miR-548l hsa-miR-374a*
    SwitchGear 3'UTR luciferase reporter plasmidGPR155 3' UTR sequence
    Inhib. RNA
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    Predesigned siRNA for gene silencing in human, mouse, rat GPR155

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    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    GP155_HUMAN, Q7Z3F1: Membrane; Multi-pass membrane protein
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    plasma membrane3
    cytosol1

    Gene Ontology (GO): 2 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016021integral component of membrane IEA--
    GO:0070062extracellular vesicular exosome IDA19056867

    GPR155 for ontologies           About GeneDecksing


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for GPR155
    Interactions:

        Search GeneGlobe Interaction Network for GPR155

    Gene Ontology (GO): 3 biological process terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0035556intracellular signal transduction IEA--
    GO:0050890cognition IMP17519220
    GO:0055085transmembrane transport IEA--

    GPR155 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for GPR155 (GP155)



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
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    REFSEQ mRNAs for GPR155 gene (4 alternative transcripts): 
    NM_001033045.3  NM_001267050.1  NM_001267051.1  NM_152529.6  

    Unigene Cluster for GPR155:

    G protein-coupled receptor 155
    Hs.516604  [show with all ESTs]
    Unigene Representative Sequence: NM_001033045
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000392552(uc002uit.3 uc002uiu.3 uc002uiv.3 uc010fqs.3)
    ENST00000392551 ENST00000295500 ENST00000459996 ENST00000497620
    miRNA
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    Selected qRT-PCR Assays for microRNAs that regulate GPR155 (see all 58):
    hsa-miR-548j hsa-miR-579 hsa-miR-640 hsa-miR-361-5p hsa-miR-548k hsa-miR-3653 hsa-miR-548l hsa-miR-374a*
    SwitchGear 3'UTR luciferase reporter plasmidGPR155 3' UTR sequence
    Inhib. RNA
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    Predesigned siRNA for gene silencing in human, mouse, rat GPR155
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GPR155
    Primer
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    OriGene qPCR primer pairs and template standards for GPR155
    OriGene qSTAR qPCR primer pairs in human, mouse for GPR155
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat GPR155
      QuantiTect SYBR Green Assays in human, mouse, rat GPR155
      QuantiFast Probe-based Assays in human, mouse, rat GPR155

    Additional mRNA sequence: 

    AK056381.1 AK091200.1 AK096665.1 AK307896.1 AK315125.1 AL834154.1 AY255528.1 BC028730.1 
    BC035037.1 BC036681.1 BX537947.1 

    6 DOTS entries:

    DT.91786639  DT.203881  DT.95284981  DT.95257905  DT.120968825  DT.91961448 

    Selected AceView cDNA sequences (see all 69):

    AX746845 AA939002 BM991366 AW339878 AI733342 AK056381 CA419877 H89339 
    BQ581471 BM802275 BF510153 AK091200 AY255528 BQ478180 BF510155 BU074288 
    BM894259 BX642419 H85871 BM479190 CA425233 AK096665 AL834154 BQ723206 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for GPR155    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12
    SP1:                                                                                    
    SP2:                                                                                    
    SP3:              -                                                                     
    SP4:        -                                                                           
    SP5:        -     -                                                                     


    ECgene alternative splicing isoforms for GPR155

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    GPR155 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: AACCCGGAAG
    GPR155 Expression
    About this image


    GPR155 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database
     selected tissues (see all 2) fully expand
     
     Blood (Hematopoietic System)
             pre Conventional Dendritic Cells Peripheral Blood
     
     Ovary (Reproductive System)
    GPR155 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    GPR155 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.516604
        Custom PCR Arrays for GPR155
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    In Situ
    Assay Products:
     

     
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of animals.

    Orthologs for GPR155 gene from Selected species (see all 15)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Gpr1551 , 5 G protein-coupled receptor 1551, 5 85.68(n)1
    90.09(a)1
      2 (43.59 cM)5
    685261  NM_001190297.21  NP_001177226.11 
     733415065 
    chicken
    (Gallus gallus)
    Aves GPR1551 G protein-coupled receptor 155 74.96(n)
    74.88(a)
      426454  XM_004942729.1  XP_004942786.1 
    lizard
    (Anolis carolinensis)
    Reptilia GPR1556
    G protein-coupled receptor 155
    70(a)
    1 ↔ 1
    GL343377.1(906190-949052)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.192722 Xenopus laevis transcribed sequences 77.25(n)    BQ384009.1 
    zebrafish
    (Danio rerio)
    Actinopterygii gpr155a1 G protein-coupled receptor 155a 60.06(n)
    59.33(a)
      100535239  XM_005172519.1  XP_005172576.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG75101 CG7510 46.19(n)
    37.73(a)
      39965  NM_140741.3  NP_648998.2 


    ENSEMBL Gene Tree for GPR155 (if available)
    TreeFam Gene Tree for GPR155 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for GPR155 (see all 987)    About this table    
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1824799651,2
    --175295891(+) TCAGAC/TTGTGT 4 -- ds50010--------
    rs1870589141,2
    --175295969(+) ACACAA/GCCCTC 4 -- ds50010--------
    rs1922323041,2
    --175295970(+) CACAGC/TCCTCT 4 -- ds50010--------
    rs1809851301,2
    --175296106(+) TTAATA/CAGCCA 4 -- ds50010--------
    rs116839981,2
    C,F,A,H--175296173(+) ACCAGC/TTTATA 4 -- ds500113Minor allele frequency- T:0.24NS EA NA CSA WA 779
    rs787562721,2
    F--175296214(+) TAGAAA/GTAACT 4 -- ds50010--------
    rs1853110121,2
    --175296245(+) GAGTTA/TGTTTC 4 -- ds50010--------
    rs116900021,2
    C,F,A,H--175296254(+) TCTTCT/CTGTAA 4 -- ds50019Minor allele frequency- C:0.24NA CSA WA EA 371
    rs116841331,2
    C,F,A,H--175296261(+) GTAAAG/ATGTGC 4 -- ds500113Minor allele frequency- A:0.23NS EA NA CSA WA 735
    rs1119847131,2
    C,F--175296267(+) TGTGCC/ACAAAA 4 -- ds50012Minor allele frequency- A:0.04WA 120

    HapMap Linkage Disequilibrium report for GPR155 (175296375 - 175351822 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 4 variations for GPR155:    About this table    
    Variant IDTypeSubtypePubMed ID
    dgv4367n71CNV Loss21882294
    nsv875421CNV Loss21882294
    nsv526187CNV Loss19592680
    dgv4366n71CNV Loss21882294

    Site Specific Mutation Identification with PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    1 disease for GPR155:    
    About MalaCards
    malaria


    GPR155 for disorders           About GeneDecksing

    Genetic Association Database (GAD): GPR155
    Human Genome Epidemiology (HuGE) Navigator: GPR155 (1 document)

    Export disorders for GPR155 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for GPR155 gene, integrated from 10 sources (see all 14):
    (articles sorted by number of sources associating them with GPR155)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The G protein-coupled receptor repertoires of human and mouse. (PubMed id 12679517)1, 2, 3 Vassilatis D.K.... Gaitanaris G.A. (Proc. Natl. Acad. Sci. U.S.A. 2003)
    2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1, 4 Rose J.E....Uhl G.R. (Mol. Med. 2010)
    3. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621)1, 2 Hillier L.W.... Wilson R.K. (Nature 2005)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (Nat. Genet. 2004)
    6. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PubMed id 21139048)1 Danielsen J.M....Nielsen M.L. (amp 2011)
    7. Large-scale proteomics and phosphoproteomics of urinary exosomes. (PubMed id 19056867)1 Gonzales P.A....Knepper M.A. (J. Am. Soc. Nephrol. 2009)
    8. Genome-wide expression profiling of lymphoblastoid cell lines distinguishes different forms of autism and reveals shared pathways. (PubMed id 17519220)1 Nishimura Y....Geschwind D.H. (Hum. Mol. Genet. 2007)
    9. The full-ORF clone resource of the German cDNA consortium. (PubMed id 17974005)2 Bechtel S.... Schupp I. (BMC Genomics 2007)
    10. The LIFEdb database in 2006. (PubMed id 16381901)1 Mehrle A....Wiemann S. (Nucleic Acids Res. 2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 151556 HGNC: 22951 AceView: GPR155 Ensembl:ENSG00000163328 euGenes: HUgn151556
    ECgene: GPR155 H-InvDB: GPR155

    (According to HUGE)
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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for GPR155 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for GPR155 gene:
    Search GeneIP for patents involving GPR155

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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