Aliases for GPR137B Gene
Aliases for GPR137B Gene
External Ids for GPR137B Gene
- HGNC: 11862
- Entrez Gene: 7107
- Ensembl: ENSG00000077585
- OMIM: 604658
- UniProtKB: O60478
Previous HGNC Symbols for GPR137B Gene
- TM7SF1
Previous GeneCards Identifiers for GPR137B Gene
- GC01P232632
- GC01P234372
- GC01P236305
- GC01P206762
Summaries for GPR137B Gene
GeneCards Summary for GPR137B Gene
GPR137B (G Protein-Coupled Receptor 137B) is a Protein Coding gene. An important paralog of this gene is GPR137.
No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPR137B Gene
Genomics for GPR137B Gene
Regulatory Elements for GPR137B Gene
Enhancers for GPR137B Gene
| GeneHancer Identifier | Score | Enhancer Sources | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Other Gene Targets for Enhancer |
|---|
Enhancers around GPR137B on UCSC Golden Path with GeneCards custom track
Promoters for GPR137B Gene
| Ensembl Regulatory Elements (ENSRs) | TSS Distance (bp) | Size (bp) | Binding Sites for Transcription Factors within promoters |
|---|
ENSRs around GPR137B on UCSC Golden Path with GeneCards custom track
- Transcription factor binding sites by QIAGEN in the GPR137B gene promoter:
Regulatory Element Products
Genomic Location for GPR137B Gene
- Chromosome:
- 1
- Start:
- 236,142,502 bp from pter
- End:
- 236,221,865 bp from pter
- Size:
- 79,364 bases
- Orientation:
- Plus strand
Genomic View for GPR137B Gene
Genes around GPR137B on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q42.3 by Ensembl
- 1q42-q43 by Entrez Gene
- 1q42-q43 by HGNC
GPR137B Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for GPR137B Gene
Proteins for GPR137B Gene
-
Protein details for GPR137B Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- O60478-G137B_HUMAN
- Recommended name:
- Integral membrane protein GPR137B
- Protein Accession:
- O60478
- Q53EK7
- Q5TAE6
- Q6FHI3
Protein attributes for GPR137B Gene
- Size:
- 399 amino acids
- Molecular mass:
- 45599 Da
- Quaternary structure:
- No Data Available
Protein Expression for GPR137B Gene
Post-translational modifications for GPR137B Gene
Other Protein References for GPR137B Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for GPR137B
- Invitrogen Antibodies for GPR137B
- GeneTex GPR137B antibody for GPR137B
-
Santa Cruz Biotechnology (SCBT) Antibodies for GPR137B
Protein Products
-
OriGene Purified Proteins for GPR137B
- Search Origene for MassSpec and Protein Over-expression Lysates for GPR137B
- Origene Custom Protein Services for GPR137B
- Search GeneTex for Proteins for GPR137B
Assay Products
No data available for DME Specific Peptides for GPR137B Gene
Domains & Families for GPR137B Gene
Suggested Antigen Peptide Sequences for GPR137B Gene
Graphical View of Domain Structure for InterPro Entry
O60478- Family:
-
- Belongs to the GPR137 family.
No data available for Gene Families for GPR137B Gene
Function for GPR137B Gene
Phenotypes for GPR137B Gene
- GenomeRNAi human phenotypes for GPR137B:
Animal Model Products
-
Taconic Biosciences Mouse Models for GPR137B
-
ViGene Biosciences lentiviral particle packaged cDNA for GPR137B gene
-
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- Search ViGene Biosciences for GPR137B
CRISPR Products
-
OriGene CRISPR knockouts for GPR137B
-
Santa Cruz Biotechnology (SCBT) CRISPR for GPR137B
- GenScript: Design CRISPR guide RNA sequences for GPR137B
miRNA for GPR137B Gene
- miRTarBase miRNAs that target GPR137B
-
- hsa-mir-17-5p (MIRT000258)
- hsa-mir-181a-5p (MIRT025133)
- hsa-let-7d-5p (MIRT032128)
- hsa-mir-20a-5p (MIRT064435)
- hsa-mir-93-5p (MIRT064436)
- hsa-mir-106a-5p (MIRT064437)
- hsa-mir-106b-5p (MIRT064438)
- hsa-mir-20b-5p (MIRT064440)
- hsa-mir-526b-3p (MIRT064441)
- hsa-mir-519d-3p (MIRT064442)
- hsa-mir-548t-5p (MIRT064446)
- hsa-mir-548az-5p (MIRT064451)
- hsa-mir-183-3p (MIRT064453)
- hsa-mir-3609 (MIRT064456)
- hsa-mir-548ah-5p (MIRT064457)
- hsa-mir-19a-3p (MIRT134301)
- hsa-mir-19b-3p (MIRT134302)
- hsa-mir-7157-3p (MIRT572040)
- hsa-mir-6737-3p (MIRT572041)
- hsa-mir-5008-3p (MIRT572042)
- hsa-mir-6889-3p (MIRT572043)
- hsa-mir-586 (MIRT572044)
- hsa-mir-4796-3p (MIRT572045)
- hsa-mir-548n (MIRT572046)
- hsa-mir-7151-3p (MIRT684477)
- hsa-mir-5095 (MIRT684478)
- hsa-mir-5589-5p (MIRT684479)
- hsa-mir-4731-5p (MIRT684480)
- hsa-mir-6778-3p (MIRT684481)
- hsa-mir-6506-5p (MIRT684482)
- hsa-mir-619-5p (MIRT684483)
- hsa-mir-150-5p (MIRT684484)
- hsa-mir-7107-5p (MIRT684485)
- hsa-mir-1234-3p (MIRT684486)
- hsa-mir-186-3p (MIRT684487)
- hsa-mir-520h (MIRT684488)
- hsa-mir-520g-3p (MIRT684489)
- hsa-mir-512-3p (MIRT684490)
- hsa-mir-4438 (MIRT684491)
- hsa-mir-520e (MIRT684492)
- hsa-mir-520d-3p (MIRT684493)
- hsa-mir-520c-3p (MIRT684494)
- hsa-mir-520b (MIRT684495)
- hsa-mir-520a-3p (MIRT684496)
- hsa-mir-373-3p (MIRT684497)
- hsa-mir-372-3p (MIRT684498)
- hsa-mir-302e (MIRT684499)
- hsa-mir-302d-3p (MIRT684500)
- hsa-mir-302c-3p (MIRT684501)
- hsa-mir-302b-3p (MIRT684502)
- hsa-mir-302a-3p (MIRT684503)
- hsa-mir-6749-3p (MIRT693308)
- hsa-mir-7108-3p (MIRT693309)
- hsa-mir-4258 (MIRT693310)
miRNA Products
- Search ViGene Biosciences for GPR137B
Clone Products
- OriGene clones in human for GPR137B
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- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
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Cell Line Products
-
ViGene Biosciences adenoviral particle packaged cDNA for GPR137B gene
-
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-
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Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GPR137B Gene
Localization for GPR137B Gene
Subcellular locations from UniProtKB/Swiss-Prot for GPR137B Gene
- Lysosome membrane; Multi-pass membrane protein.
| Compartment | Confidence |
|---|---|
| plasma membrane | 5 |
| lysosome | 3 |
| vacuole | 3 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005765 | lysosomal membrane | IEA | -- |
| GO:0016020 | membrane | TAS | 9521871 |
| GO:0016021 | integral component of membrane | IEA | -- |
More details on SuperPathways for GPR137BTranscripts for GPR137B Gene
mRNA/cDNA for GPR137B Gene
- (1) REFSEQ mRNAs :
- (8) Additional mRNA sequences :
- (161) Selected AceView cDNA sequences:
- (5) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for GPR137B Gene
CRISPR Products
-
OriGene CRISPR knockouts for GPR137B
-
Santa Cruz Biotechnology (SCBT) CRISPR for GPR137B
- GenScript: Design CRISPR guide RNA sequences for GPR137B
miRNA Products
- Search ViGene Biosciences for GPR137B
Clone Products
- OriGene clones in human for GPR137B
- OriGene ORF clones in human,mouse,rat for GPR137B
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- Addgene plasmids for GPR137B
Flow Cytometry Products
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6a | · | 6b | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11a | · | 11b | · | 11c | · | 11d |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | - | - | |||||||||||||||||||||||||||||
| SP2: | - | - | - | ||||||||||||||||||||||||||||||
| SP3: | - | ||||||||||||||||||||||||||||||||
| SP4: | |||||||||||||||||||||||||||||||||
| SP5: | - | ||||||||||||||||||||||||||||||||
| SP6: |
Expression for GPR137B Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Kidney (Urinary System)
- Loop of Henle Cells Loop of Henle
- Proximal Tubule Cells Proximal Tubule
- Loop of Henle
- Proximal Tubule
- Epithelial Tubule
-
Epithelial Cells
- Loop of Henle Cells Loop of Henle
- Proximal Tubule Cells Proximal Tubule
- Eye (Sensory Organs)
This gene is overexpressed in Retina (69.0).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for GPR137B Gene
SOURCE GeneReport for Unigene cluster for GPR137B Gene Hs.498160
mRNA Expression by UniProt/SwissProt for GPR137B Gene
O60478-G137B_HUMAN
Tissue specificity:
Expressed in kidney, heart, brain and placenta.
Primer Products
-
OriGene qPCR primer pairs and template standards for GPR137B
-
OriGene qPCR primer pairs for GPR137B
No data available for mRNA differential expression in normal tissues for GPR137B Gene
Orthologs for GPR137B Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| cow (Bos Taurus) |
Mammalia | GPR137B 35 |
|
||
| GPR137B 36 |
|
OneToOne | |||
| dog (Canis familiaris) |
Mammalia | GPR137B 35 |
|
||
| GPR137B 36 |
|
OneToOne | |||
| mouse (Mus musculus) |
Mammalia | Gpr137b 35 |
|
||
| Gpr137b 16 |
|
||||
| Gpr137b 36 |
|
OneToOne | |||
| chimpanzee (Pan troglodytes) |
Mammalia | GPR137B 35 |
|
||
| GPR137B 36 |
|
OneToOne | |||
| oppossum (Monodelphis domestica) |
Mammalia | GPR137B 36 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | GPR137B 36 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | GPR137B 35 |
|
||
| GPR137B 36 |
|
OneToOne | |||
| lizard (Anolis carolinensis) |
Reptilia | GPR137B 36 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | gpr137b 35 |
|
||
| Str.3726 35 |
|
||||
| zebrafish (Danio rerio) |
Actinopterygii | LOC100001171 35 |
|
||
| wufi39g02 35 |
|
||||
| GPR137B (1 of 2) 36 |
|
OneToMany | |||
| GPR137B (2 of 2) 36 |
|
OneToMany |
- Species with no ortholog for GPR137B:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for GPR137B Gene
(4) SIMAP similar genes for GPR137B Gene using alignment to 4 proteins:
Variants for GPR137B Gene
| SNP ID | Clin | Chr 01 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs5873 | -- | 236,208,531(-) | TCTAT(A/G)TTTTT | downstream-variant-500B, utr-variant-3-prime | |
| rs911270 | -- | 236,140,947(+) | CTCTA(A/T)CCCCA | upstream-variant-2KB | |
| rs911271 | -- | 236,146,724(+) | AACTT(A/C)CCCCT | intron-variant | |
| rs1254195 | -- | 236,198,289(-) | aggca(C/G)agatt | intron-variant | |
| rs1254196 | -- | 236,198,269(-) | caata(C/T)cacac | intron-variant |
Residual Variation Intolerance Score:
48.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
1.27;
25.32% of all genes are more intolerant (likely to be disease-causing)
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for GPR137B Gene
Disorders for GPR137B Gene
Relevant External Links for GPR137B
No disorders were found for GPR137B Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GPR137B Gene
Publications for GPR137B Gene
- Cloning and characterization of a novel gene (TM7SF1) encoding a putative seven-pass transmembrane protein that is upregulated during kidney development. (PMID: 9521871) Spangenberg C. … Lobbert R.W. (Genomics 1998) 2 3 4 67
- The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
- Genome-wide pharmacogenomic study of neurocognition as an indicator of antipsychotic treatment response in schizophrenia. (PMID: 21107309) McClay J.L. … van den Oord E.J. (Neuropsychopharmacology 2011) 3
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
- Missense mutation in the tubulin-specific chaperone E (Tbce) gene in the mouse mutant progressive motor neuronopathy, a model of human motoneuron disease. (PMID: 12446740) Bommel H. … Sendtner M. (J. Cell Biol. 2002) 3
Products for GPR137B Gene
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- OriGene qPCR primer pairs for GPR137B
- OriGene qPCR primer pairs and template standards for GPR137B
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- Novus Biologicals Antibodies for GPR137B
- Novus Biologicals proteins and lysates for GPR137B
- Novus Biologicals
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- Taconic Biosciences Mouse Models for GPR137B
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- Humanized Mice
- Addgene plasmids for GPR137B
- GeneTex GPR137B antibody for GPR137B
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- ViGene Biosciences adenoviral particle packaged cDNA for GPR137B gene
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- ViGene Biosciences ready-to-package AAV shRNAs for GPR137B gene
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- Search ViGene Biosciences for GPR137B
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- Santa Cruz Biotechnology (SCBT) Antibodies for GPR137B
- Search Santa Cruz Biotechnology (SCBT) for GPR137B siRNA/shRNA
- Santa Cruz Biotechnology (SCBT) CRISPR for GPR137B
Sources for GPR137B Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) I2D
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) RNAdb
- (30) ASD
- (31) ECgene
- (32) GeneAnnot
- (33) SAGE
- (34) SOURCE
- (35) HomoloGene
- (36) PanEnsembl
- (37) euGenes
- (38) SGD
- (39) FlyBase
- (40) WormBase
- (41) Pseudogene
- (42) DGV
- (43) dbSNP
- (44) HapMap
- (45) GenAtlas
- (46) GeneTests
- (47) HGMD
- (48) GAD
- (49) LSDB
- (50) BGMUT
- (51) HuGE
- (52) eBioscience
- (53) Atlas
- (54) Cell Signaling Technology
- (55) GenBank
- (56) H-invDB
- (57) HORDE
- (58) HUGE
- (59) IMGT
- (60) Leiden
- (61) MILLIPORE
- (62) miRBase
- (63) DME
- (64) Nature
- (65) NCBI
- (66) OriGene
- (67) PubMed
- (68) R&D Systems
- (69) Salk
- (70) TGDB
- (71) Tufts
- (72) YEDA
- (73) CROW21
- (74) Tocris
- (75) Abcam
- (76) Novus
- (77) ProSpec
- (78) Sino Biological
- (79) GenScript
- (80) Qiagen
- (81) Cloud-Clone Corp.
- (82) Enzo Life Sciences
- (83) OCA
- (84) Proteopedia
- (85) MOPED
- (86) SPIRE
- (87) neXtProt
- (88) Reactome
- (89) GeneGo (Thomson Reuters)
- (90) fRNAdb
- (91) DISEASES
- (92) SIMAP
- (93) GenomeRNAi
- (94) LifeMap
- (95) miRTarBase
- (96) MalaCards
- (97) Invitrogen
- (98) BitterDB
- (99) Vector BioLabs
- (100) ESI-BIO
- (101) RefSeq
- (102) BioSystems
- (103) MaxQB
- (104) IUPHAR
- (105) BioGPS
- (106) Illumina
- (107) COMPARTMENTS
- (108) HOMER
- (109) PaxDb
- (110) ApexBio
- (111) Addgene
- (112) Advanced Cell Diagnostics
- (113) antibodies-online
- (114) CYP
- (115) NONCODE
- (116) SwitchGear Genomics
- (117) TreeFam
- (118) PathCards
- (119) GeneReviews
- (120) GeneTex
- (121) Taconic Biosciences
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- (123) ProteomicsDB
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- (135) Disease Ontology
- (136) Genetics Home Reference
- (137) MeSH
- (138) MedlinePlus
- (139) CDC
- (140) NINDS
- (141) NCBI Bookshelf
- (142) ClinVar
- (143) Gene Damage Index
- (144) ViGene Biosciences
- (145) HPO
- (146) UDN
- (147) VISTA
- (148) FANTOM5
- (149) ENCODE
- (150) ProSci
- (151) Horizon