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GPR137 Gene

protein-coding   GIFtS: 45
GCID: GC11P064051

G Protein-Coupled Receptor 137

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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
G Protein-Coupled Receptor 1371 2
Transmembrane 7 Superfamily Member 1-Like 1 Protein2 3
C11orf42 3
GPR137A2 3
TM7SF1L12 3
Integral Membrane Protein GPR1372

External Ids:    HGNC: 243001   Entrez Gene: 568342   Ensembl: ENSG000001732647   UniProtKB: Q96N193   

Export aliases for GPR137 gene to outside databases

Previous GC identifers: GC11P063810 GC11P060379


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for GPR137 Gene:
GPR137 (G protein-coupled receptor 137) is a protein-coding gene. An important paralog of this gene is GPR137B.


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000011.9  NT_167190.2  NC_018922.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the GPR137 gene promoter:
         CREB   ATF-2   deltaCREB   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): GPR137 promoter sequence
   Search Chromatin IP Primers for GPR137

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat GPR137


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11cen-q22.3   Ensembl cytogenetic band:  11q13.1   HGNC cytogenetic band: 11q13.1

GPR137 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GPR137 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11P064051:  view genomic region     (about GC identifiers)

Start:
64,037,534 bp from pter      End:
64,056,972 bp from pter
Size:
19,439 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: G137A_HUMAN, Q96N19 (See protein sequence)
Recommended Name: Integral membrane protein GPR137  
Size: 417 amino acids; 46059 Da
Secondary accessions: B4DTG7 B7Z7M1 Q4G0Y9 Q8N4K6
Alternative splicing: 5 isoforms:  Q96N19-1   Q96N19-2   Q96N19-3   Q96N19-4   Q96N19-5   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for GPR137: NX_Q96N19

Explore proteomics data for GPR137 at MOPED

Post-translational modifications: 

  • Glycosylation2 at Asn4, Asn257
  • Modification sites at PhosphoSitePlus

  • See GPR137 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins (5 alternative transcripts): 
    NP_001164197.1  NP_001164351.1  NP_001164352.1  NP_001170829.1  NP_064540.3  

    ENSEMBL proteins: 
     ENSP00000445570   ENSP00000442322   ENSP00000411827   ENSP00000440928   ENSP00000438716  
     ENSP00000438146   ENSP00000366931   ENSP00000446342   ENSP00000441003   ENSP00000445000  
     ENSP00000446387   ENSP00000415698   ENSP00000321698   ENSP00000441034   ENSP00000442929  
     ENSP00000443443   ENSP00000442792  

    GPR137 Human Recombinant Protein Products:

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    HGNC Gene Families:
    O7TM: GPCR / Unclassified : 7TM orphan receptors

    IUPHAR Guide to PHARMACOLOGY protein family classification: GPR137
    Other 7TM proteins

    1 InterPro protein domain:
     IPR027209 GPR137

    Graphical View of Domain Structure for InterPro Entry Q96N19

    ProtoNet protein and cluster: Q96N19

    UniProtKB/Swiss-Prot: G137A_HUMAN, Q96N19
    Similarity: Belongs to the GPR137 family


    Find genes that share domains with GPR137           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Phenotypes:
         1 GenomeRNAi human phenotype for GPR137:
     Increased circadian period len 

    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for GPR137
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       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for GPR137
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    miRNA
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    Block miRNA regulation of human, mouse, rat GPR137 using miScript Target Protectors
    Selected qRT-PCR Assays for microRNAs that regulate GPR137 (see all 13):
    hsa-miR-98 hsa-let-7d hsa-let-7c hsa-let-7i hsa-let-7g hsa-let-7e hsa-let-7b hsa-miR-149
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    Predesigned siRNA for gene silencing in human, mouse, rat GPR137

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    GenScript: all cDNA clones in your preferred vector: GPR137 (NM_003272)
    Sino Biological Human cDNA Clone for GPR137
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GPR137

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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GPR137


    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    G137A_HUMAN, Q96N19: Membrane; Multi-pass membrane protein (Potential)
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    plasma membrane3

    Gene Ontology (GO): 1 cellular component term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016021integral component of membrane IEA--

    Find genes that share ontologies with GPR137           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for GPR137
    Interactions:

        Search GeneGlobe Interaction Network for GPR137

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for GPR137 (G137A)



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for GPR137 gene (5 alternative transcripts): 
    NM_001170726.1  NM_001170880.1  NM_001170881.1  NM_001177358.1  NM_020155.3  

    Unigene Cluster for GPR137:

    G protein-coupled receptor 137
    Hs.523763  [show with all ESTs]
    Unigene Representative Sequence: NM_001170881
    Selected Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 19):
    ENST00000546139 ENST00000538244 ENST00000411458(uc010rni.2) ENST00000536667
    ENST00000539833 ENST00000546201 ENST00000377702 ENST00000535675 ENST00000543383
    ENST00000538032 ENST00000540370 ENST00000536017(uc001nzh.2) ENST00000438980(uc001nzi.3 uc021qkt.1)
    ENST00000313074 ENST00000542190 ENST00000541952 ENST00000545366 ENST00000536282

    miRNA
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    Selected qRT-PCR Assays for microRNAs that regulate GPR137 (see all 13):
    hsa-miR-98 hsa-let-7d hsa-let-7c hsa-let-7i hsa-let-7g hsa-let-7e hsa-let-7b hsa-miR-149
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
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    OriGene RNAi products in human, mouse, rat for GPR137
    Predesigned siRNA for gene silencing in human, mouse, rat GPR137
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    OriGene ORF clones in mouse, rat for GPR137
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat GPR137
    Primer
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    OriGene qSTAR qPCR primer pairs in human, mouse for GPR137
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat GPR137
      QuantiTect SYBR Green Assays in human, mouse, rat GPR137
      QuantiFast Probe-based Assays in human, mouse, rat GPR137

    Additional mRNA sequence: 

    AJ250392.1 AK056094.1 AK300209.1 AK302256.1 BC020396.1 BC029297.1 BC033920.1 BC035002.1 

    21 DOTS entries:

    DT.97760032  DT.455273  DT.95115779  DT.100839742  DT.91792789  DT.95115780  DT.95363584  DT.101978224 
    DT.86846333  DT.75157638  DT.97760031  DT.120716511  DT.91742507  DT.92363242  DT.100781618  DT.120716468 
    DT.120716513  DT.95115777  DT.99951516  DT.92026158  DT.95103878 

    Selected AceView cDNA sequences (see all 190):

    BU689814 BI850672 AI151232 AI567943 BM705470 BM694388 BM503899 BQ673174 
    BQ880778 AW006233 AA809942 BU786789 BU581701 BQ880346 BM554088 BF515283 
    BQ024093 BQ722908 BF739796 BQ670267 AI291374 AA831289 AI269136 BU150427 

    GeneLoc Exon Structure

    Selected Alternative Splicing Database (ASD) splice patterns (SP) for GPR137 (see all 11)    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c ^ 6 ^ 7a · 7b · 7c · 7d · 7e ^ 8a · 8b ^ 9a · 9b ^ 10a · 10b · 10c ^ 11a · 11b
    SP1:        -     -     -     -     -     -                                               -     -     -                                             
    SP2:                                                                                      -                                                         
    SP3:                                                                                      -                                               -         
    SP4:        -     -     -     -     -     -                       -     -     -     -     -     -     -                                             
    SP5:              -     -     -     -     -                                                                                                         


    ECgene alternative splicing isoforms for GPR137

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    GPR137 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: ACCTGCCACC
    GPR137 Expression
    About this image

    GPR137 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    GPR137 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.523763
        Custom PCR Arrays for GPR137
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GPR137

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of chordates.

    Orthologs for GPR137 gene from Selected species (see all 9)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Gpr1371 , 5 G protein-coupled receptor 1371, 5 88.89(n)1
    95.2(a)1
      19 (5.09 cM)5
    1071731  NM_207220.21  NP_997103.11 
     69380705 
    lizard
    (Anolis carolinensis)
    Reptilia GPR1376
    G protein-coupled receptor 137
    61(a)
    1 ↔ 1
    GL344419.1(635-12224)
    zebrafish
    (Danio rerio)
    Actinopterygii GPR137 (1 of 2)6
    gpr1376
    G protein-coupled receptor 137
    51(a)
    46(a)
    1 ↔ many
    1 ↔ many
    11(45386139-45387349) ENSDARG00000022587
    14(27448325-27459799) ENSDARG00000037244


    ENSEMBL Gene Tree for GPR137 (if available)
    TreeFam Gene Tree for GPR137 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for GPR137 gene
    GPR137B2  GPR137C2  
    4 SIMAP similar genes for GPR137 using alignment to 14 protein entries:     G137A_HUMAN (see all proteins):
    ORF4    GPR137B    DKFZp686N01223    GPR137C

    Find genes that share paralogs with GPR137           About GenesLikeMe



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for GPR137 (see all 118)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs2022256671,2
    --64054258(+) GCGCCA/TACCGC 10 N Y mis10--------
    rs2007838261,2
    --64054381(+) GGGGGA/GCGGGA 5 -- int10--------
    rs787830961,2
    C,F--64054464(+) AGCGTC/TGGCCG 10 R W mis11Minor allele frequency- T:0.03EA 120
    rs1382618311,2
    C--64054480(+) GAGCCA/GAGGCT 10 Q R mis10--------
    rs1820972191,2
    C--64054525(+) CAGGTC/TAGGGG 5 -- int10--------
    rs1441211461,2
    --64054602(+) GTCTGC/TGGAAG 5 -- int10--------
    rs1468986631,2
    C--64054619(+) GAAAAA/GTTAAA 5 -- int10--------
    rs1875905471,2
    --64054724(+) TCATCC/TACCAT 5 -- int10--------
    rs2004395911,2
    C--64054730(+) ACCAT-/GGAGGG 5 -- int10--------
    rs37821031,2
    H--64054811(+) CCCTCG/ATCATT 5 -- int14Minor allele frequency- A:0.00NS EA 418

    HapMap Linkage Disequilibrium report for GPR137 (64037534 - 64056972 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 10 variations for GPR137:    About this table    
    Variant IDTypeSubtypePubMed ID
    nsv357CNV Insertion18451855
    nsv897685CNV Loss21882294
    dgv1168n71CNV Loss21882294
    dgv1165n71CNV Loss21882294
    dgv1166n71CNV Loss21882294
    dgv1156n71CNV Loss21882294
    nsv897684CNV Loss21882294
    nsv832186CNV Loss17160897
    dgv1163n71CNV Loss21882294
    nsv469961CNV Loss18288195

    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing GPR137
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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      --

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for GPR137 gene integrated from 10 sources:
    (articles sorted by number of sources associating them with GPR137)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (Nat. Genet. 2004)
    3. Characterization of five novel human genes in the 11q13-q22 region. (PubMed id 10873569)1, 3 O'Brien K.P....Dumanski J.P. (Biochem. Biophys. Res. Commun. 2000)
    4. A novel sarcoidosis risk locus for Europeans on chromosome 11q13.1. (PubMed id 22837380)1 Fischer A....Schreiber S. (Am. J. Respir. Crit. Care Med. 2012)
    5. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PubMed id 16554811)2 Taylor T.D....Sakaki Y. (Nature 2006)
    6. Novel human G-protein-coupled receptors. (PubMed id 12732197)3 Vanti W.B....O'Dowd B.F. (Biochem. Biophys. Res. Commun. 2003)
    7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002)
    8. Normalization and subtraction: two approaches to facilitate gene discovery. (PubMed id 8889548)1 Bonaldo M.F.... Soares M.B. (Genome Res. 1996)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section

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    Entrez Gene: 56834 HGNC: 24300 AceView: C11ORF4 Ensembl:ENSG00000173264 euGenes: HUgn56834
    ECgene: GPR137 H-InvDB: GPR137

    (According to HUGE)
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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for GPR137 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for GPR137 gene:
    Search GeneIP for patents involving GPR137

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, eBioscience, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
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