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Aliases & Descriptions for GPI
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| AMF 1, 2, 3 | | EC 5.3.1.9 3 | | GNPI 2 | | NLK 1, 2, 3 | | Neuroleukin 3 | | PGI 2, 3 | | PHI 2, 3 | | SA-36 3 | | SA36 2 | | neuroleukin 2 | | oxoisomerase 2 | | phosphohexomutase 2 | | phosphosaccharomutase 2 |
| | | Descriptions |
|---|
| Autocrine motility factor 2, 3 | | Phosphoglucose isomerase 2, 3 | | Phosphohexose isomerase 2, 3 | | Sperm antigen 36 3 | | glucose phosphate isomerase 2 | | glucose-6-phosphate isomerase 2 | | hexose monophosphate isomerase 2 | | hexosephosphate isomerase 2 | | sperm antigen-36 2 |
|
| | Search outside databases for aliases for GPI genePrevious GC identifers: GC19P035473 GC19P035305 GC19P039531 |
Summaries for GPI(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for GPI: This gene belongs to the GPI family whose members encode multifunctional phosphoglucose isomerase proteins involved in energy pathways. The protein encoded by this gene is a dimeric enzyme that catalyzes the reversible isomerization of glucose-6-phosphate and fructose-6-phosphate. The protein functions in different capacities inside and outside the cell. In the cytoplasm, the gene product is involved in glycolysis and gluconeogenesis, while outside the cell it functions as a neurotrophic factor for spinal and sensory neurons. Defects in this gene are the cause of nonspherocytic hemolytic anemia and a severe enzyme deficiency can be associated with hydrops fetalis, immediate neonatal death and neurological impairment. [provided by RefSeq] UniProtKB/Swiss-Prot: G6PI_HUMAN, P06744Function: Besides it's role as a glycolytic enzyme, mammalian GPI can function as a tumor-secreted cytokine and an angiogenic factor (AMF) that stimulates endothelial cell motility. GPI is also a neurotrophic factor (Neuroleukin) for spinal and sensory neuronsGene Wiki entry for GPI |
Genomic Location for GPI
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the GPI gene 
Entrez Gene cytogenetic band: 19q13.1 Ensembl cytogenetic band: 19q13.11 HGNC cytogenetic band: 19q13.1GPI Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure GeneLoc location for GC19P039547:
(about GC identifiers)
Start:
|
39,547,909 bp from pter |
End:
|
39,583,076 bp from pter |
Size:
|
35,168 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000019.8 NT_011109.15
| Proteins for GPI
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: G6PI_HUMAN, P06744 (See
protein sequence)Recommended Name: Glucose-6-phosphate isomerase Size: 558 amino acids; 63147 Da
Subunit: Homodimer in the catalytically active form, monomer in the secreted form
Subcellular location: Cytoplasm. Secreted
PDB structures from and Proteopedia :1IAT (3D)
 1IRI (3D)
 1JIQ (3D)
 1JLH (3D)
 1NUH (3D)
 
Secondary accessions: Q9BRD3 Q9BSK5 Q9UHE6Post-translational modifications:
Phosphorylation at Ser-185 by CK2 has been shown to decrease enzymatic activity and may contribute to secretion by a non-classical secretory pathway1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_000166.2
ENSEMBL proteins: ENSP00000376067 ENSP00000348877
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: GPI 
2 Gene Ontology (GO) cellular component terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005615 | extracellular space |
IEA | -- | | GO:0005737 | cytoplasm |
IEA | -- | About this table
Antibodies for GPI: Assays for GPI: | Protein
Domains/ Families for GPI(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P06744
ProtoNet protein and cluster: P06744 1 Blocks protein family: IPB001672 Phosphoglucose isomerase (PGI)
UniProtKB/Swiss-Prot: G6PI_HUMAN, P06744Similarity: Belongs to the GPI family | Gene Function for GPI
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000175
Applied Biosystems Silencer® siRNAs for GPI
Sigma-Aldrich siRNA for GPI  Sigma-Aldrich shRNA for GPI  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000175                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000175                                  untagged cDNA clone in CMV expression vector: NM_000175 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000175
UniProtKB/Swiss-Prot: G6PI_HUMAN, P06744Function: Besides it's role as a glycolytic enzyme, mammalian GPI can function as a tumor-secreted cytokine and an angiogenic factor (AMF) that stimulates endothelial cell motility. GPI is also a neurotrophic factor (Neuroleukin) for spinal and sensory neuronsCatalytic activity: D-glucose 6-phosphate = D-fructose 6-phosphateEnzyme Number (IUBMB): EC 5.3.1.9 Genatlas biochemistry entry for GPI:glucose phosphate isomerase (neuroleukin),glycolysis,gluconeogenesis,energy pathways8 MGI mutant phenotypes (inferred from 14 alleles ) (MGI details for Gpi1):
5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for GPI
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
3 Sigma-Aldrich "Your Favorite Gene" Pathways for GPI (Your Favorite Gene powered by Ingenuity) 
UniProtKB/Swiss-Prot: G6PI_HUMAN, P06744Pathway: Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 2/4 Gene Network CentralTM Interacting Genes and Proteins Network for GPI 
5/70 Interacting proteins for GPI (ENSP000003488773) via UniProtKB, MINT, and/or STRING (see all 70
)About this table
5 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for GPI(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for GPI 10/28 Novoseek chemical compound relationships for GPI gene (see all 28
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| glucose 6-phosphate |
88.68 |
178 |
8381960 (5), 15206941 (3), 10916680 (3), 15290745 (2) (see all 87) |
| 6-phosphogluconate |
76.44 |
12 |
9041338 (1), 1471744 (1), 18817779 (1), 7737089 (1) (see all 9) |
| fructose-6-phosphate |
74.05 |
19 |
8381960 (3), 15103138 (1), 10916680 (1), 14586688 (1) (see all 10) |
| erythrose 4-phosphate |
55.20 |
3 |
12374700 (1), 15850830 (1) |
| glucosamine 6-phosphate |
45.32 |
1 |
9864853 (1) |
| pyruvate |
38.54 |
12 |
9362562 (2), 8283448 (1), 1967237 (1), 1846809 (1) (see all 9) |
| glyceraldehyde 3-phosphate |
35.56 |
8 |
1834654 (2), 15752986 (1), 1471744 (1), 17464938 (1) (see all 6) |
| isocitrate |
19.88 |
3 |
1471744 (1), 8625862 (1) |
| udpglucose |
19.34 |
1 |
2287590 (1) |
| mannose 6-phosphate |
19.31 |
9 |
8381960 (5), 1471744 (1) |
About this table
|
Transcripts for GPI(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000175
Sigma-Aldrich siRNA for GPI  Sigma-Aldrich shRNA for GPI  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000175 REFSEQ mRNAs for GPI gene: NM_000175.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000175               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000175                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000175                                  untagged cDNA clone in CMV expression vector: NM_000175  Additional cDNA sequence: AK129884.1 AK130102.1 AK293446.1 AK294396.1 AK301103.1 BC004982.1 BX641158.1 CR599066.1 CR600477.1 CR600588.1 CR603258.1 CR606478.1 CR614183.1 CR620238.1 CR620767.1 CR624212.1 K03515.1 X16539.1 24/67 DOTS entries (see all 67
): DT.100674927 DT.91798987 DT.92389405 DT.100674924 DT.100864718 DT.100674908 DT.97851996 DT.100859652 DT.95346616 DT.100674934 DT.100674910 DT.100674906 DT.121476681 DT.92053999 DT.100674925 DT.40193020 DT.121476863 DT.100048150 DT.97801200 DT.101965639 DT.91689860 DT.100674903 DT.121476499 DT.121476520 24/1209 AceView cDNA sequences (see all 1209
):AU143478 BP360395 BQ918218 BE888183 BP347030 BQ573898 BM974054 BQ059118 BM802483 AL536626 CR594354 AL518041 BX344466 BE140526 CB268787 BU149544 BP334348 BQ348185 BG036512 CR592665 BQ691326 BQ675954 BG698031 BM469077
highest scoring ESTs for GPI:K03515 AA256833 AA295747 AA306849 AA307028 AA363983 AA368873 AA384500 AA426535 AA550881 Unigene Cluster for GPI: Glucose phosphate isomerase Hs.466471 [show with all ESTs]Unigene Representative Sequence: BX641158
GeneLoc Exon Structure
5/10 Alternative Splicing Database (ASD) splice patterns (SP) for GPI (see all 10
)
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4 | ^ | 5a | · | 5b | · | 5c | ^ | 6 | ^ | 7a | · | 7b | · | 7c | ^ | 8 | ^ | 9a | · | 9b | ^ | 10 | ^ | 11a | · | 11b | · | 11c | ^ | 12 | ^ | 13 | ^ | 14a | · | 14b | ^ | 15 | ^ | 16a | · | |
| SP1: | |   | - |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 16b | ^ | 17a | · | 17b | ^ | 18 | ^ | 19a | · | 19b | |
| SP1: | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for GPI
2 Ensembl transcripts including schematic representations: ENST00000392234
ENST00000356487
|
Expression for GPI
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| GPI expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for GPI
1 / 2 / 3 6 probe-sets matching GPI gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TAGAAAAATA
SOURCE GeneReport for Unigene cluster: Hs.466471
Expression variation in blood from EXPOLDB for GPI |
Orthologs for GPI
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for GPI gene from 5/23 species (see all 23
)
About this table Species with no ortholog for GPI
ENSEMBL Gene Tree for GPI | Paralogs for GPI(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for GPI(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for GPI (up to first 250kb)
|
Disorders & Mutations for GPI
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 172400 UniProtKB/Swiss-Prot: G6PI_HUMAN, P06744
Defects in GPI are a cause of hereditary nonspherocytic hemolytic anemia (HA) [MIM:172400]. Severe GPI deficiency can be associated with hydrops fetalis, immediate neonatal death and neurological impairment10/40 Novoseek disease relationships for GPI gene (see all 40
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| hereditary nonspherocytic hemolytic anemia |
81.10 |
6 |
7927011 (2), 9446754 (1), 8218542 (1), 17041899 (1) |
| anemia hemolytic |
67.56 |
30 |
9362562 (3), 11371164 (2), 8417789 (2), 9856489 (2) (see all 15) |
| anemia hemolytic congenital |
63.30 |
4 |
8822954 (1), 12737943 (1), 9616041 (1) |
| arthritis |
58.34 |
37 |
15290745 (3), 15320914 (3), 18534002 (3), 12687536 (3) (see all 20) |
| rheumatoid arthritis |
56.05 |
34 |
11477412 (2), 15228189 (2), 12730513 (2), 14508072 (2) (see all 18) |
| metastasis |
54.10 |
42 |
15684571 (2), 16294294 (2), 2006007 (1), 7591303 (1) (see all 31) |
| enzyme deficiency |
50.57 |
3 |
10916680 (1), 7927011 (1) |
| tumors |
42.62 |
95 |
15684571 (5), 14566819 (4), 14968121 (4), 17828376 (3) (see all 47) |
| leishmaniasis cutaneous |
40.83 |
1 |
9574789 (1) |
| fibrosarcoma |
40.10 |
2 |
14566819 (1) |
About this table
1 PharmGKB disease relationship for GPI geneAbout this table
Genatlas disease: GPI hemolytic anemia,hydrops fetalis Human Gene Mutation Database: GPI Genetic Association Database: GPI
|
Medical News for GPI(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for GPI (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/259 PubMed articles for GPI gene (see all 259
):- Glucosephosphate isomerase (GPI) deficiency mutations associated with hereditary nonspherocytic hemolytic anemia (HNSHA). (PubMed id 9446754)1, 3, 4, 6 Beutler E.... Forman L. (1997)
- Characterization of the 5' end of the gene for human glucose phosphate isomerase (GPI). (PubMed id 2387591)1, 2, 3, 4 Walker J.I.H.... Morgan M.J. (1990)
- Molecular basis of neurological dysfunction coupled with haemolytic anaemia in human glucose-6-phosphate isomerase (GPI) deficiency. (PubMed id 9856489)1, 3, 4 Kugler W.... Lakomek M. (1998)
- Cloning of a glucose phosphate isomerase/neuroleukin-like sperm antigen involved in sperm agglutination. (PubMed id 10727272)1, 3, 4 Yakirevich E. and Naot Y. (2000)
- Differential regulation of phosphoglucose isomerase/autocrine motility factor activities by protein kinase CK2 phosphorylation. (PubMed id 15637053)1, 3, 4 Yanagawa T....Raz A. (2005)
- Phosphohexose isomerase/autocrine motility factor/neuroleukin/maturation factor is a multifunctional phosphoprotein. (PubMed id 11004567)1, 3, 4 Haga A....Raz A. (2000)
- Crystal structure of human phosphoglucose isomerase and analysis of the initial catalytic steps. (PubMed id 12573240)1, 3, 4 Cordeiro A.T....Thiemann O.H. (2003)
- Study of the molecular defects in glucose phosphate isomerase- deficient patients affected by chronic hemolytic anemia. (PubMed id 8822952)1, 3, 4 Baronciani L.... Sirchia G. (1996)
- The characterization of gene mutations for human glucose phosphate isomerase deficiency associated with chronic hemolytic anemia. (PubMed id 7989588)1, 3, 4 Xu W. and Beutler E. (1994)
- Molecular analysis of glucose phosphate isomerase deficiency associated with hereditary hemolytic anemia. (PubMed id 8822954)1, 3, 4 Kanno H.... Miwa S. (1996)
|
Search for GPI
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing GPI
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing GPI
(According to HUGE)
About This Section
| -- |
Specialized Databases showing GPI(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| ATLAS Chromosomes in Cancer entry for GPI | Genetics and Cytogenetics in Oncology and Haematology | | SHMPD | http://shmpd.bii.a-star.edu.sg/gene.php?genestart=A&genename=GPI | | Wikipedia | http://en.wikipedia.org/wiki/Phosphoglucose_isomerase | | NIEHS-SNPs | http://egp.gs.washington.edu/data/gpi/ |
|
| | | About This Section
| --
| Services for GPI(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for GPI:

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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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