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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

GOT1 Gene

protein-coding   GIFtS: 63
GCID: GC10M101146

glutamic-oxaloacetic transaminase 1, soluble (aspartate...

 Explore 34 diseases affiliated with
GOT1 via our new
 Human Malady Compendium 
Biological research products
for GOT1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Glutamic-Oxaloacetic Transaminase 1, Soluble (Aspartate Aminotransferase
1)1 2
     ASTQTL12
Glutamate Oxaloacetate Transaminase 12 3     GIG182
Transaminase A2 3     Aspartate Aminotransferase, Cytoplasmic2
EC 2.6.1.13 8     Growth-Inhibiting Protein 182

External Ids:    HGNC: 44321   Entrez Gene: 28052   Ensembl: ENSG000001200537   OMIM: 1381805   UniProtKB: P171743   

Export aliases for GOT1 gene to outside databases

Previous GC identifers: GC10M100049 GC10M100390 GC10M101287 GC10M100821 GC10M094783


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for GOT1:
Glutamic-oxaloacetic transaminase is a pyridoxal phosphate-dependent enzyme which exists in cytoplasmic and
mitochondrial forms, GOT1 and GOT2, respectively. GOT plays a role in amino acid metabolism and the urea and
tricarboxylic acid cycles. The two enzymes are homodimeric and show close homology. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: AATC_HUMAN, P17174
Function: Plays a key role in amino acid metabolism (By similarity)

Gene Wiki entry for GOT1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000010.10  NC_018921.1  NT_030059.13  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the GOT1 gene promoter:
         STAT1   STAT1beta   Egr-4   STAT1alpha   AREB6   Egr-2   PPAR-gamma1   FOXO1a   PPAR-gamma2   FOXO1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidGOT1 promoter sequence
   Search SABiosciences Chromatin IP Primers for GOT1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GOT1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 10q24.1-q25.1   Ensembl cytogenetic band:  10q24.2   HGNC cytogenetic band: 10q24.1-q25.1

GOT1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GOT1 gene location

GeneLoc information about chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10M101146:  view genomic region     (about GC identifiers)

Start:
101,156,627 bp from pter      End:
101,190,530 bp from pter
Size:
33,904 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: AATC_HUMAN, P17174 (See protein sequence)
Recommended Name: Aspartate aminotransferase, cytoplasmic  
Size: 413 amino acids; 46248 Da
Cofactor: Pyridoxal phosphate
Subunit: Homodimer
Subcellular location: Cytoplasm
Miscellaneous: In eukaryotes there are cytoplasmic, mitochondrial and chloroplastic isozymes
1 PDB 3D structure from and Proteopedia for GOT1:
3II0 (3D)    
Secondary accessions: B2R6R7 Q5VW80

Explore the universe of human proteins at neXtProt for GOT1: NX_P17174

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P17174

  • 4/21 DME Specific Peptides for GOT1 (P17174) (see all 21)
     DPTPEQW  EKRVGGV  CAHNPTG  AGFKDIR 

    GOT1 Protein expression data from MOPED and PaxDb:    About this image 
    GOT1 Protein Expression
    REFSEQ proteins: NP_002070.1  
    ENSEMBL proteins: 
     ENSP00000359539   ENSP00000445578  
    Reactome Protein details: P17174
    Human Recombinant Protein Products for GOT1: 
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    Browse Proteins at Uscn

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005625soluble fraction ----
    GO:0005737cytoplasm IDA7060339
    GO:0005764lysosome IEA--
    GO:0005829cytosol TAS--
    GO:0043679axon terminus IEA--

    GOT1 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    GOT1 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR004838 NHTrfase_class1_PyrdxlP-BS
     IPR004839 Aminotransferase_I/II
     IPR015424 PyrdxlP-dep_Trfase
     IPR000796 Asp_trans
     IPR015421 PyrdxlP-dep_Trfase_major_sub1

    Graphical View of Domain Structure for InterPro Entry P17174

    ProtoNet protein and cluster: P17174

    3 Blocks protein families:
    IPB000796 Aspartate aminotransferase signature
    IPB004838 Aminotransferase
    IPB004839 Aminotransferase


    UniProtKB/Swiss-Prot: AATC_HUMAN, P17174
    Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: AATC_HUMAN, P17174
    Function: Plays a key role in amino acid metabolism (By similarity)
    Catalytic activity: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate

         Genatlas biochemistry entry for GOT1:
    glutamic-oxaloacetic transaminase 1,soluble (aspartate aminotransferase 1)

         Enzyme Number (IUBMB): EC 2.6.1.11 2

         Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004069L-aspartate:2-oxoglutarate aminotransferase activity TAS--
    GO:0004609phosphatidylserine decarboxylase activity IEA--
    GO:0008483transaminase activity TAS--
    GO:0030170pyridoxal phosphate binding IEA--
    GO:0031406carboxylic acid binding IEA--
         
    GOT1 for ontologies           About GeneDecksing


    Phenotypes:
         2 GenomeRNAi human phenotypes for GOT1:
     Elongated cells  Upregulation of Wnt/beta-caten 

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for GOT1 

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    hsa-miR-876-3p hsa-miR-9 hsa-miR-3122 hsa-miR-1276 hsa-miR-3913-5p hsa-miR-3151 hsa-miR-323-5p hsa-miR-1207-5p
    SwitchGear 3'UTR luciferase reporter plasmidGOT1 3' UTR sequence
    Inhib. RNA
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GOT1


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/17 super-pathways (see all 17About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1glutamate degradation II
    glutamate degradation II1.00
    aspartate degradation II0.60
    aspartate biosynthesis1.00
    Phenylalanine, tyrosine and tryptophan biosynthesis0.33
    2Glucose metabolism
    Glucose metabolism1.00
    Gluconeogenesis0.50
    3Sulfur amino acid metabolism
    Sulfur amino acid metabolism1.00
    Cysteine and methionine metabolism0.36
    4Metabolism
    Metabolism1.00
    Metabolic pathways0.38
    5Tyrosine metabolism
    Tyrosine metabolism1.00
    Phenylalanine metabolism0.35

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    5/8 BioSystems Pathways for GOT1 (see all 8
        phenylalanine degradation IV (mammalian, via side chain)
    Alanine and aspartate metabolism
    Glycolysis and Gluconeogenesis
    aspartate degradation II
    glutamate degradation II

    5/9        Reactome Pathways for GOT1 (see all 9)
        Gluconeogenesis
    Metabolism of carbohydrates
    Metabolism of polyamines
    Metabolism
    Methionine salvage pathway

    1 PharmGKB Pathway for GOT1
        Valproic Acid Pathway, Pharmacodynamics

    5/7         Kegg Pathways  (Kegg details for GOT1) (see all 7):
        Alanine, aspartate and glutamate metabolism
    Cysteine and methionine metabolism
    Arginine and proline metabolism
    Tyrosine metabolism
    Phenylalanine metabolism


    GOT1 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for GOT1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/209 Interacting proteins for GOT1 (P171742, 3 ENSP000003595394) via UniProtKB, MINT, STRING, and/or I2D (see all 209)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H4AP628053I2D: score=1 
    HIST1H4BP628053I2D: score=1 
    HIST1H4CP628053I2D: score=1 
    HIST1H4DP628053I2D: score=1 
    HIST1H4EP628053I2D: score=1 
    About this table

    Gene Ontology (GO): 5/24 biological process terms (GO ID links to tree view) (see all 24):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000096sulfur amino acid metabolic process TAS--
    GO:0005975carbohydrate metabolic process TAS--
    GO:0006006glucose metabolic process TAS--
    GO:0006094gluconeogenesis TAS--
    GO:00061032-oxoglutarate metabolic process ISS--

    GOT1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for GOT1

    10/18 HMDB Compounds for GOT1 (see all 18)    About this table
    CompoundSynonyms CAS #PubMed Ids
    3-Mercaptopyruvic acid3-Mercaptopyruvate (see all 13)2464-23-5--
    3-Sulfinoalanine3-Sulphino-L-alanine (see all 9)1115-65-7--
    3-Sulfinylpyruvic acid3-Sulfinopyruvate (see all 5)----
    3-Sulfopyruvic acid3-sulfopyruvate (see all 8)98022-26-5--
    4-Hydroxy-2-oxoglutaric acid(+/-)-2-hydroxy-4-oxopentanedioate (see all 9)1187-99-1--
    4-Hydroxy-L-glutamic acid4-hydroxy-L-glutamate (see all 7)2485-33-8--
    4-Hydroxyphenylpyruvic acid(p-Hydroxyphenyl)pyruvate (see all 25)156-39-8--
    Cysteic acid2-Amino-3-sulfopropionate (see all 19)498-40-8--
    FamotidineAmfamox (see all 83)76824-35-6--
    L-Aspartic acid(+)-Aspartate (see all 41)56-84-8--

    5 DrugBank Compounds for GOT1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    L-Aspartic Acid(+)-Aspartic acid (see all 23)56-84-8target--17244260 17328883 17168267 17442055 17545671
    Pyridoxal PhosphateCodecarboxylase (see all 9)54-47-7targetactivator12167474 11752352 16925884 11340119 11888303
    L-Cysteine(R)-2-Amino-3-mercaptopropanoic acid (see all 13)52-90-4target--17139284 17016423
    L-Glutamic Acid(2S)-2-Aminopentanedioic acid (see all 15)56-86-0target--17444813
    Maleic Acid-- 110-16-7target--10592235

    Search CenterWatch for drugs/clinical trials and news about GOT1 / AATC 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for GOT1 gene: 
    NM_002079.2  

    Unigene Cluster for GOT1:

    Glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)
    Hs.500756  [show with all ESTs]
    Unigene Representative Sequence: NM_002079
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000370508(uc001kpr.3 uc009xwi.2) ENST00000489349 ENST00000471741
    ENST00000543866

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    Additional cDNA sequence: 

    AF052153.1 AK293483.1 AK301916.1 AK309174.1 AK312684.1 AY513279.1 BC000498.2 M37400.1 

    18 DOTS entries:

    DT.95161440  DT.100880095  DT.450537  DT.100767584  DT.100880100  DT.121276203  DT.95161437  DT.100880101 
    DT.91766831  DT.91766816  DT.102823882  DT.121276217  DT.86843273  DT.91766828  DT.95161431  DT.97854688 
    DT.100743022  DT.101979725 

    24/584 AceView cDNA sequences (see all 584):

    AA284445 BG566332 BM833497 AI365638 CR619243 CF551943 AA579757 CR601723 
    BG431428 AI276814 BQ438905 BM968486 CF551810 H06362 BM857235 BU520808 
    CR620721 T85488 BX345172 BM459544 AI140172 BU623600 AW051465 BG110032 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    GOT1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CACGGACACG
    GOT1 Expression
    About this image
    See GOT1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for GOT1

    SOURCE GeneReport for Unigene cluster: Hs.500756
        SABiosciences Expression via Pathway-Focused PCR Array including GOT1: 

              Amino Acid Metabolism II in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the last universal common ancestor (LUCA).

    Orthologs for GOT1 gene from 11/38 species (see all 38)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Got11 , 5 glutamate oxaloacetate transaminase 1, soluble1, 5 87.09(n)1
    90.8(a)1
      19 (36.67 cM)5
    147181  NM_010324.21  NP_034454.21 
     434997525 
    chicken
    (Gallus gallus)
    Aves GOT11 glutamic-oxaloacetic transaminase 1, soluble (aspartate more 76.12(n)
    80.44(a)
      396261  NM_205321.1  NP_990652.1 
    lizard
    (Anolis carolinensis)
    Reptilia GOT16
    --
    82(a)
    1 ↔ 1
    3(38473854-38486439)
    African clawed frog
    (Xenopus laevis)
    Amphibia xr406-prov2 Aspartate aminotransferase 75.29(n)    BC045269.1 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.282362 Danio rerio cDNA clone MGC55996 IMAGE3819704, complete more 75.9(n)    BC047800.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG84303
    Got11
    aspartate aminotransferase3
    Glutamate oxaloacetate transaminase 11
    56(a)3
    59.1(n)1
    56.86(a)1
      367821  NM_166148.11  NP_725534.11 
    worm
    (Caenorhabditis elegans)
    Secernentea T01C8.53
    got-1.21
    aminotransferase3
    Protein GOT-1.21
    53(a)
    (best of 3)3
    58.5(n)1
    54.46(a)1
      X(16822325-16823912)3
    1817261  NM_078308.41  NP_510709.11 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes AAT2(YLR027C)4
    AAT21
    Cytosolic aspartate aminotransferase, involved in nitrogen more4
    Aat2p1
    51.63(n)1
    48.12(a)1
      12(198085-196829)4
    8507141, 4  NP_013127.21, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons ASP31 aspartate aminotransferase 55.61(n)
    50.62(a)
      831024  NM_121190.2  NP_196713.1 
    rice
    (Oryza sativa)
    Liliopsida Os01g07606001 hypothetical protein 55.94(n)
    51.35(a)
      4325621  NM_001050852.1  NP_001044317.1 


    ENSEMBL Gene Tree for GOT1 (if available)
    TreeFam Gene Tree for GOT1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for GOT1 gene
    GOT22  GOT1L12  
    3 SIMAP similar genes for GOT1 using alignment to 2 protein entries:     AATC_HUMAN (see all proteins):
    GIG18    GOT2    GOT1L1

    GOT1 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for GOT1
    PGOHUM00000249433


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    UniProtKB/Swiss-Prot: AATC_HUMAN, P17174
    Polymorphism: Genetic variations in GOT1 are associated with low serum aspartate aminotransferase and define the
    aspartate aminotransferase serum level quantitative trait locus 1 (ASTQTL1) [MIM:614419]


    10/509 NCBI SNPs in GOT1 are shown (see all 509    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 10 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs122175841,2
    F,A,H--94783009(+) CTGATG/TTTCTA 1 -- ds50014Minor allele frequency- T:0.01NS EA 414
    rs1120357511,2
    --94783244(+) TAGTGG/ATCATA 1 -- ds50011Minor allele frequency- A:0.50CSA 2
    rs26421,2
    C--94783386(+) TCAGTT/CAAATA 1 -- ut313Minor allele frequency- C:0.16WA CSA 121
    rs18025081,2
    C,F--94783533(-) GCTGCG/AGCATT 1 -- ut311Minor allele frequency- A:0.03WA 118
    rs111900821,2
    C,H--94783873(+) ATGTAG/CGTTTG 1 -- ut31 ese34Minor allele frequency- C:0.00NS EA 420
    rs1134912471,2
    F--94784504(+) CATTTC/TATTTT 1 -- int12Minor allele frequency- T:0.50CSA 4
    rs1156942011,2
    C,F--94784692(+) TGGGTA/GAGAAG 1 -- int11Minor allele frequency- G:0.03WA 118
    rs558155251,2
    C--94785489(+) GCCTAC/TATACA 1 -- int12Minor allele frequency- T:0.15WA 120
    rs79065011,2
    C,F,A,H--94785959(+) caggaG/Attgac 1 -- int13Minor allele frequency- A:0.16WA NA 126
    rs113138741,2
    C--94786009(+) AAAAA-/TCTTAA 1 -- int10--------

    HapMap Linkage Disequilibrium report for GOT1 (101156627 - 101190530 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for GOT1: --
    Human Gene Mutation Database (HGMD): GOT1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing GOT1
    DNA2.0 Custom Variant and Variant Library Synthesis for GOT1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    GOT1 for disorders           About GeneDecksing

    OMIM gene information: 138180    OMIM disorders: --

    20/34 diseases for GOT1 (see all 34):    About MalaCards
    severe acute respiratory syndrome    type 2 diabetes mellitus    substance abuse    ochoa syndrome
    glucose intolerance    primary biliary cirrhosis    myocardial infarction    acute myocardial infarction
    pyelonephritis    reye syndrome    acute pyelonephritis    diabetes mellitus
    insulin resistance    hepatitis a    osteopetrosis    gallbladder disease
    leukopenia    myelodysplastic syndrome    autoimmune hepatitis    cholangitis

    20/23 diseases from the University of Copenhagen DISEASES database for GOT1 (see all 23):
    Liver disease     Fatty liver disease     Hepatitis B     Cholestasis
    Hepatitis C     Vascular disease     Thrombocytopenia     Hepatocellular carcinoma
    Cholangitis     Autoimmune hepatitis     Bilirubin metabolic disorder     Diarrhea
    Hepatitis A     Substance abuse     Myocardial infarction     Diabetes mellitus
    Leukopenia     Gallbladder disease     Reye syndrome     Myopathy
    Human Genome Epidemiology (HuGE) Navigator: GOT1 (3 documents)

    Export disorders for GOT1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for GOT1 gene, integrated from 9 sources (see all 69):
    (articles sorted by number of sources associating them with GOT1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Properties of human liver cytosolic aspartate aminotransferase mRNAs generated by alternative polyadenylation site selection. (PubMed id 1974457)1, 2, 3 Bousquet-Lemercier B.... Barouki R. (1990)
    2. Genome-wide association study identifies genetic variants in GOT1 determining serum aspartate aminotransferase levels. (PubMed id 21900944)1, 2 Shen H.... Gong D.W. (2011)
    3. The DNA sequence and comparative analysis of human chromosome 10. (PubMed id 15164054)1, 2 Deloukas P.... Rogers J. (2004)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. The amino acid sequence of cytosolic aspartate aminotransferase from human liver. (PubMed id 2241899)1, 2 Doyle J.M.... Doonan S. (1990)
    6. Genetic homogeneity, high-resolution mapping, and mutation analysis of the urofacial (Ochoa) syndrome and exclusion of the glutamate oxaloacetate transaminase gene (GOT1) in the critical region as the disease gene. (PubMed id 10360399)1, 9 Wang C.Y....She J.X. (1999)
    7. Elevated aspartate and alanine aminotransferase levels and natural death among patients with methamphetamine dependence. (PubMed id 22242166)1 Kuo C.J....Chen W.J. (2012)
    8. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)
    9. A genome-wide scan of Ashkenazi Jewish Crohn's disease suggests novel susceptibility loci. (PubMed id 22412388)1 Kenny E.E....Peter I. (2012)
    10. Association of genetic polymorphism -670A>G in the Fas gene and serum markers AST platelet ratio index, AST/ALT with significant fi brosis and cirrhosis in chronic hepatitis C. (PubMed id 22352690)1 Deghady A....Diab I. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
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      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2805 HGNC: 4432 AceView: GOT1 Ensembl:ENSG00000120053 euGenes: HUgn2805
    ECgene: GOT1 Kegg: 2805 H-InvDB: GOT1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for GOT1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for GOT1 gene:
    Search GeneIP for patents involving GOT1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

     
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