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Aliases for GOLGA6L17P Gene

Aliases for GOLGA6L17P Gene

  • Golgin A6 Family-Like 17, Pseudogene 2 3 5
  • Golgin A6 Family-Like 21, Pseudogene 2 3
  • Golgi Autoantigen, Golgin Subfamily A, 6 Pseudogene 3
  • Golgin A6 Family, Member A Pseudogene 3
  • GOLGA6L21P 3

External Ids for GOLGA6L17P Gene

Previous HGNC Symbols for GOLGA6L17P Gene

  • GOLGA6L21P

Previous GeneCards Identifiers for GOLGA6L17P Gene

  • GC15P082815

Summaries for GOLGA6L17P Gene

GeneCards Summary for GOLGA6L17P Gene

GOLGA6L17P (Golgin A6 Family-Like 17, Pseudogene) is a Pseudogene.

Additional gene information for GOLGA6L17P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GOLGA6L17P Gene

Genomics for GOLGA6L17P Gene

Genomic Locations for GOLGA6L17P Gene

Genomic Locations for GOLGA6L17P Gene
chr15:82,519,590-82,526,484
(GRCh38/hg38)
Size:
6,895 bases
Orientation:
Plus strand
chr15:82,804,003-82,811,851
(GRCh37/hg19)

Genomic View for GOLGA6L17P Gene

Genes around GOLGA6L17P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOLGA6L17P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOLGA6L17P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOLGA6L17P Gene

No data available for Regulatory Elements for GOLGA6L17P Gene

Proteins for GOLGA6L17P Gene

Post-translational modifications for GOLGA6L17P Gene

No Post-translational modifications

No data available for DME Specific Peptides for GOLGA6L17P Gene

Domains & Families for GOLGA6L17P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GOLGA6L17P Gene

Function for GOLGA6L17P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOLGA6L17P Gene

Localization for GOLGA6L17P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GOLGA6L17P Gene

Pathways & Interactions for GOLGA6L17P Gene

SuperPathways for GOLGA6L17P Gene

No Data Available

Interacting Proteins for GOLGA6L17P Gene

Gene Ontology (GO) - Biological Process for GOLGA6L17P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GOLGA6L17P Gene

Drugs & Compounds for GOLGA6L17P Gene

No Compound Related Data Available

Transcripts for GOLGA6L17P Gene

mRNA/cDNA for GOLGA6L17P Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GOLGA6L17P Gene

No ASD Table

Relevant External Links for GOLGA6L17P Gene

GeneLoc Exon Structure for
GOLGA6L17P
ECgene alternative splicing isoforms for
GOLGA6L17P

Expression for GOLGA6L17P Gene

mRNA differential expression in normal tissues according to GTEx for GOLGA6L17P Gene

This gene is overexpressed in Testis (x6.8).

NURSA nuclear receptor signaling pathways regulating expression of GOLGA6L17P Gene:

GOLGA6L17P

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOLGA6L17P Gene

Orthologs for GOLGA6L17P Gene

Evolution for GOLGA6L17P Gene

ENSEMBL:
Gene Tree for GOLGA6L17P (if available)
TreeFam:
Gene Tree for GOLGA6L17P (if available)

No data available for Orthologs for GOLGA6L17P Gene

Paralogs for GOLGA6L17P Gene

No data available for Paralogs for GOLGA6L17P Gene

Variants for GOLGA6L17P Gene

Sequence variations from dbSNP and Humsavar for GOLGA6L17P Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1006033299 -- 82,525,357(+) AAATT(A/T)AAAAA intron-variant
rs1010302118 -- 82,525,488(+) ACTGC(A/G)CTGCA intron-variant
rs1011823526 -- 82,526,720(+) CATAT(C/T)GAGTT downstream-variant-500B
rs1011854548 -- 82,526,977(+) CCACT(C/G)TGAGT downstream-variant-500B
rs1017806173 -- 82,526,846(+) CATTA(C/T)GGAAT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for GOLGA6L17P Gene

Variant ID Type Subtype PubMed ID
nsv984102 CNV duplication 23825009
nsv977744 CNV duplication 23825009
nsv952012 CNV deletion 24416366
nsv833071 CNV gain 17160897
nsv483125 CNV loss 15286789
nsv471686 CNV gain+loss 15918152
nsv469699 CNV loss 16826518
nsv1131093 CNV deletion 24896259
nsv1126402 CNV deletion 24896259
nsv1120052 OTHER inversion 24896259
nsv1069878 CNV deletion 25765185
nsv1069876 CNV deletion 25765185
nsv1035899 CNV gain 25217958
esv22027 CNV gain+loss 19812545
esv21531 CNV gain+loss 19812545

Relevant External Links for GOLGA6L17P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOLGA6L17P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GOLGA6L17P Gene

Disorders for GOLGA6L17P Gene

Relevant External Links for GOLGA6L17P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
GOLGA6L17P

No disorders were found for GOLGA6L17P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOLGA6L17P Gene

Publications for GOLGA6L17P Gene

No publications were found for GOLGA6L17P Gene.

Products for GOLGA6L17P Gene

Sources for GOLGA6L17P Gene

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