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Aliases for GOLGA2P9 Gene

Aliases for GOLGA2P9 Gene

  • Golgin A2 Pseudogene 9 2 3 5

External Ids for GOLGA2P9 Gene

Previous GeneCards Identifiers for GOLGA2P9 Gene

  • GC19P022783

Summaries for GOLGA2P9 Gene

GeneCards Summary for GOLGA2P9 Gene

GOLGA2P9 (Golgin A2 Pseudogene 9) is a Pseudogene.

Additional gene information for GOLGA2P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GOLGA2P9 Gene

Genomics for GOLGA2P9 Gene

GeneHancer (GH) Regulatory Elements for GOLGA2P9 Gene

Promoters and enhancers for GOLGA2P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I023525 Enhancer 0.3 ENCODE 5.5 +929.6 929570 0.8 SOX13 LINC01224 GOLGA2P9 ENSG00000233836 LOC105372337 ZNF725P ZNF675
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GOLGA2P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GOLGA2P9 Gene

Genomic Locations for GOLGA2P9 Gene
chr19:22,596,257-22,603,550
(GRCh38/hg38)
Size:
7,294 bases
Orientation:
Plus strand
chr19:22,779,059-22,786,352
(GRCh37/hg19)

Genomic View for GOLGA2P9 Gene

Genes around GOLGA2P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOLGA2P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOLGA2P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOLGA2P9 Gene

Proteins for GOLGA2P9 Gene

Post-translational modifications for GOLGA2P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GOLGA2P9 Gene

Domains & Families for GOLGA2P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GOLGA2P9 Gene

Function for GOLGA2P9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOLGA2P9 Gene

Localization for GOLGA2P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GOLGA2P9 Gene

Pathways & Interactions for GOLGA2P9 Gene

SuperPathways for GOLGA2P9 Gene

No Data Available

Interacting Proteins for GOLGA2P9 Gene

Gene Ontology (GO) - Biological Process for GOLGA2P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GOLGA2P9 Gene

Drugs & Compounds for GOLGA2P9 Gene

No Compound Related Data Available

Transcripts for GOLGA2P9 Gene

mRNA/cDNA for GOLGA2P9 Gene

(1) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GOLGA2P9 Gene

No ASD Table

Relevant External Links for GOLGA2P9 Gene

GeneLoc Exon Structure for
GOLGA2P9
ECgene alternative splicing isoforms for
GOLGA2P9

Expression for GOLGA2P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GOLGA2P9 Gene

mRNA differential expression in normal tissues according to GTEx for GOLGA2P9 Gene

This gene is overexpressed in Testis (x51.9).

NURSA nuclear receptor signaling pathways regulating expression of GOLGA2P9 Gene:

GOLGA2P9
genes like me logo Genes that share expression patterns with GOLGA2P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOLGA2P9 Gene

Orthologs for GOLGA2P9 Gene

Evolution for GOLGA2P9 Gene

ENSEMBL:
Gene Tree for GOLGA2P9 (if available)
TreeFam:
Gene Tree for GOLGA2P9 (if available)

No data available for Orthologs for GOLGA2P9 Gene

Paralogs for GOLGA2P9 Gene

No data available for Paralogs for GOLGA2P9 Gene

Variants for GOLGA2P9 Gene

Sequence variations from dbSNP and Humsavar for GOLGA2P9 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000335339 -- 22,598,459(+) C/A intron_variant
rs1000835613 -- 22,594,350(+) G/A upstream_transcript_variant
rs1001049212 -- 22,600,702(+) A/G intron_variant
rs1001080194 -- 22,601,050(+) C/T intron_variant
rs1001188518 -- 22,601,328(+) TGTG/TG intron_variant

Structural Variations from Database of Genomic Variants (DGV) for GOLGA2P9 Gene

Variant ID Type Subtype PubMed ID
dgv140n111 CNV duplication 26073780
dgv3n43 CNV gain 19587683
dgv511e201 CNV deletion 23290073
dgv512e201 CNV deletion 23290073
dgv633e199 CNV deletion 23128226
esv2663825 CNV deletion 23128226
esv2751784 CNV gain 17911159
esv2758750 CNV gain+loss 17122850
esv34340 CNV loss 17911159
esv3643958 CNV loss 21293372
esv3643959 CNV loss 21293372
esv3643960 CNV gain 21293372
esv3893182 CNV gain 25118596
esv4924 OTHER complex 18987735
nsv1078307 OTHER inversion 25765185
nsv1113993 CNV deletion 24896259
nsv1120056 OTHER inversion 24896259
nsv436853 CNV insertion 17901297
nsv525240 CNV gain 19592680
nsv833787 CNV gain 17160897
nsv953255 CNV deletion 24416366
nsv960814 CNV duplication 23825009

Additional Variant Information for GOLGA2P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOLGA2P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GOLGA2P9 Gene

Disorders for GOLGA2P9 Gene

Additional Disease Information for GOLGA2P9

No disorders were found for GOLGA2P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOLGA2P9 Gene

Publications for GOLGA2P9 Gene

No publications were found for GOLGA2P9 Gene.

Products for GOLGA2P9 Gene

Sources for GOLGA2P9 Gene

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