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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

GNGT2 Gene

protein-coding   GIFtS: 56
GCID: GC17M047283

guanine nucleotide binding protein (G protein), gamma transducing...

 Explore 6 diseases affiliated with
GNGT2 via our new
 Human Malady Compendium 
Biological research products
for GNGT2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Guanine Nucleotide Binding Protein (G Protein), Gamma Transducing Activity
Polypeptide 21 2
     G-GAMMA-82
GNG91 2 3     G-GAMMA-C2
G Gamma-C2 3     G Protein Cone Gamma 8 Subunit2
Guanine Nucleotide Binding Protein Gamma Transducing Activity Polypeptide 22 3     Gamma-T2 Subunit2
G-Gamma-91     Guanine Nucleotide Binding Protein Gamma 92
GNG82 3     Guanine Nucleotide-Binding Protein G(I)/G(S)/G(O) Subunit Gamma-T22
GNGT82 3     G-Gamma-81

External Ids:    HGNC: 44121   Entrez Gene: 27932   Ensembl: ENSG000001670837   OMIM: 1393915   UniProtKB: O146103   

Export aliases for GNGT2 gene to outside databases

Previous GC identifers: GC17M046994 GC17M049763 GC17M047626 GC17M047758 GC17M044638 GC17M042649


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for GNGT2:
Phototransduction in rod and cone photoreceptors is regulated by groups of signaling proteins. The encoded protein is
thought to play a crucial role in cone phototransduction. It belongs to the G protein gamma family and localized
specifically in cones. Several transcript variants encoding the same protein have been found for this gene. (provided
by RefSeq, Nov 2010)

UniProtKB/Swiss-Prot: GBGT2_HUMAN, O14610
Function: Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various
transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of
GDP by GTP, and for G protein-effector interaction

summary for GNGT2:
Heterotrimeric G proteins are membrane bound GTPases that are linked to 7-TM receptors. Each G protein
contains an alpha-, beta- and gamma-subunit and is bound to GDP in the 'off' state. Ligand-receptor binding
results in detachment of the G protein, switching it to an 'on' state and permitting Galpha activation of
second messenger signalling cascades. There are several types of Galpha proteins; in addition, some
Gbetagamma subunits have active functions. Gbetagamma coupled to H1 receptors can activate PLA2 and
Gbetagamma coupled to M1 receptors can activate KIR channels.

Gene Wiki entry for GNGT2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010783.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the GNGT2 gene promoter:
         Ik-2   GATA-3   Nkx2-2   Pax-2   Lmo2   Pax-2a   Nkx2-5   Pax-4a   GATA-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidGNGT2 promoter sequence
   Search SABiosciences Chromatin IP Primers for GNGT2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GNGT2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17q21   Ensembl cytogenetic band:  17q21.32   HGNC cytogenetic band: 17q21

GNGT2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GNGT2 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17M047283:  view genomic region     (about GC identifiers)

Start:
47,280,153 bp from pter      End:
47,287,936 bp from pter
Size:
7,784 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: GBGT2_HUMAN, O14610 (See protein sequence)
Recommended Name: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2 precursor  
Size: 69 amino acids; 7747 Da
Subunit: G proteins are composed of 3 units, alpha, beta and gamma
Subcellular location: Cell membrane; Lipid-anchor; Cytoplasmic side (Potential)
Secondary accessions: B2R746 D3DTW5

Explore the universe of human proteins at neXtProt for GNGT2: NX_O14610

GNGT2 Protein expression data from MOPED and PaxDb:    About this image 
GNGT2 Protein Expression

REFSEQ proteins (4 alternative transcripts): 
NP_001185683.1  NP_001185684.1  NP_001185685.1  NP_113686.1  

ENSEMBL proteins: 
 ENSP00000420946   ENSP00000426022   ENSP00000300406   ENSP00000423924   ENSP00000421710  
 ENSP00000422879  
Reactome Protein details: O14610
Human Recombinant Protein Products for GNGT2: 
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Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005576extracellular region NAS--
GO:0005834heterotrimeric G-protein complex NAS9286705
GO:0005886plasma membrane TAS--

GNGT2 for ontologies           About GeneDecksing



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(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

GNGT2 for domains           About GeneDecksing

2 InterPro domains/families:
 IPR001770 Gprotein-gamma
 IPR015898 G-protein_gamma-like_dom

Graphical View of Domain Structure for InterPro Entry O14610

ProtoNet protein and cluster: O14610

1 Blocks protein family: IPB001770 Gamma G-protein (transducin) signature

UniProtKB/Swiss-Prot: GBGT2_HUMAN, O14610
Similarity: Belongs to the G protein gamma family


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Molecular Function:

     UniProtKB/Swiss-Prot Summary: GBGT2_HUMAN, O14610
Function: Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various
transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of
GDP by GTP, and for G protein-effector interaction

     Genatlas biochemistry entry for GNGT2:
guanine nucleotide binding protein (G protein) gamma subunit,retinal cone phosphoreceptor specific

     Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0003924GTPase activity NAS9286705
GO:0004871signal transducer activity NAS9286705
     
GNGT2 for ontologies           About GeneDecksing


Animal Models:
   inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for GNGT2 

miRNA
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SwitchGear 3'UTR luciferase reporter plasmidGNGT2 3' UTR sequence
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In Situ Assay
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Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GNGT2


(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways - 5/60 super-pathways (see all 60About this table 
See pathways by source

Super-pathwaycontained gene-specific pathways
1G beta:gamma signalling through PLC beta
8/12 pathways (see all 12)
G beta:gamma signalling through PLC beta1.00
G beta:gamma signalling through PI3Kgamma0.61
Presynaptic function of Kainate receptors0.95
Inhibition of Insulin Secretion by Adrenaline/Noradrenaline0.55
Prostacyclin signalling through prostacyclin receptor0.77
G-protein activation0.55
G-protein beta:gamma signalling0.71
Glucagon-type ligand receptors0.52
2Development Angiotensin activation of ERK
8/9 pathways (see all 9)
Development Angiotensin activation of ERK1.00
Development G-Proteins mediated regulation MARK-ERK signaling0.66
Development_Angiotensin activation of ERK0.98
Development_EDNRB signaling0.54
Development_ACM2 and ACM4 activation of ERK0.74
Development EDNRB signaling0.54
Development ACM2 and ACM4 activation of ERK0.74
Cholinergic synapse0.30
3Development_A3 receptor signaling
Development_A3 receptor signaling1.00
Development A1 receptor signaling0.65
Development A3 receptor signaling1.00
G-protein signaling_G-Protein alpha-q signaling cascades0.53
Development_A1 receptor signaling0.65
G-protein signaling G-Protein alpha-q signaling cascades0.53
4G-protein signaling_G-Protein alpha-i signaling cascades
G-protein signaling_G-Protein alpha-i signaling cascades1.00
Development Beta-adrenergic receptors regulation of ERK0.55
G-protein signaling G-Protein alpha-i signaling cascades1.00
G-protein signaling_G-Protein alpha-s signaling cascades0.44
Development_Beta-adrenergic receptors regulation of ERK0.55
G-protein signaling G-Protein alpha-s signaling cascades0.44
5Development_Dopamine D2 receptor transactivation of EGFR
Development_Dopamine D2 receptor transactivation of EGFR1.00
Development Alpha-2 adrenergic receptor activation of ERK0.66
Development Dopamine D2 receptor transactivation of EGFR1.00
Chemotaxis_CXCR4 signaling pathway0.48
Development_Alpha-2 adrenergic receptor activation of ERK0.66
Chemotaxis CXCR4 signaling pathway0.48

Pathway sources
See GeneCards unified pathways
Show all pathways

5/31 EMD Millipore Pathways for GNGT2 (see all 31)
    Chemotaxis CXCR4 signaling pathway
Translation Translation regulation by Alpha-1 adrenergic receptors
Development Activation of ERK by Alpha-1 adrenergic receptors
Cytoskeleton remodeling Role of PKA in cytoskeleton reorganisation
Development A1 receptor signaling

5/47 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for GNGT2 (see all 47)
    Molecular Mechanisms of Cancer
Intracellular Calcium Signaling
CDK5 Pathway
JNK Pathway
ERK5 Signaling

5/34 GeneGo (Thomson Reuters) Pathways for GNGT2 (see all 34)
    Signal transduction cAMP signaling
G-protein signaling Regulation of p38 and JNK signaling mediated by G-proteins
G-protein signaling G-Protein alpha-i signaling cascades
Inhibitory action of Lipoxins and Resolvin E1 on neutrophil functions
Signal transduction Activation of PKC via G-Protein coupled receptor

2 BioSystems Pathways for GNGT2 
    G Protein Signaling Pathways
Visual signal transduction- Cones

5/47        Reactome Pathways for GNGT2 (see all 47)
    G alpha (12/13) signalling events
Platelet homeostasis
G protein gated Potassium channels
G alpha (z) signalling events
Inwardly rectifying K+ channels


3         Kegg Pathways  (Kegg details for GNGT2):
    Chemokine signaling pathway
Glutamatergic synapse
Cholinergic synapse


GNGT2 for pathways           About GeneDecksing

Interactions:

    SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for GNGT2

STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

5/66 Interacting proteins for GNGT2 (O146103 ENSP000003004064) via UniProtKB, MINT, STRING, and/or I2D (see all 66)
InteractantInteraction Details
GeneCardExternal ID(s)
KCNJ4P480503, ENSP000003064974I2D: score=2 STRING: ENSP00000306497
GNB1P628733, ENSP000003678724I2D: score=1 STRING: ENSP00000367872
GNB4Q9HAV03, ENSP000002325644I2D: score=1 STRING: ENSP00000232564
GNB2P628793, ENSP000003052604I2D: score=1 STRING: ENSP00000305260
GNA15ENSP000002629584STRING: ENSP00000262958
About this table

Gene Ontology (GO): 4 biological process terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0006184GTP catabolic process NAS9286705
GO:0007186G-protein coupled receptor signaling pathway NAS9286705
GO:0007268synaptic transmission TAS--
GO:0007602phototransduction NAS9286705

GNGT2 for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section
Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Compounds for GNGT2 available from Tocris Bioscience    About this table
CompoundAction CAS #
GalleinInhibitor of betagamma signaling[2103-64-2]
GRK2iGRK2 inhibitory polypeptide. Gbetagamma antagonist[148505-03-7]

3 HMDB Compounds for GNGT2    About this table
CompoundSynonyms CAS #PubMed Ids
Guanosine diphosphate5'-GDP (see all 10)146-91-8--
Guanosine monophosphate5'-GMP (see all 14)85-32-5--
Guanosine triphosphate5'-GTP (see all 10)86-01-1--
Search CenterWatch for drugs/clinical trials and news about GNGT2 / GBGT2 

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for GNGT2 gene (4 alternative transcripts): 
NM_001198754.1  NM_001198755.1  NM_001198756.1  NM_031498.2  

Unigene Cluster for GNGT2:

Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
Hs.181781  [show with all ESTs]
Unigene Representative Sequence: BM560838
6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000503070 ENST00000511277(uc002ioo.2 uc021tzo.1 uc021tzp.1 uc021tzq.1)
ENST00000300406 ENST00000515635 ENST00000507680 ENST00000511673

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Additional cDNA sequence: 

AF365870.1 AF493876.1 AK312839.1 BC008663.1 

5 DOTS entries:

DT.310647  DT.100736579  DT.100670638  DT.120991973  DT.99999470 

24/31 AceView cDNA sequences (see all 31):

AF493876 BM727966 AW406640 AI986049 AA826124 BP431367 AA827682 BC008663 
AA826126 AI857683 BU934040 BM799620 BM723861 AA937384 BX106556 BG166602 
BE618270 BU933059 AA919048 BU742490 NM_031498 H29895 BX491014 CB565923 

GeneLoc Exon Structure

5 Alternative Splicing Database (ASD) splice patterns (SP) for GNGT2    About this scheme

ExUns: 1 ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d · 6e
SP1:        -     -     -     -                                             
SP2:                    -     -                                             
SP3:                          -                                             
SP4:                                                                        
SP5:                                                                        


ECgene alternative splicing isoforms for GNGT2

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

GNGT2 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GAGCCCTGCC
GNGT2 Expression
About this image

GNGT2 expression in embryonic tissues and stem cells
Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

6 LifeMap In Vivo Development Anatomical Compartments/Cells 
Tissue Anatomical Compartment CellCategory (developmental path)
EyeOuter Nuclear LayerMature M Cone CellsPhotoreceptors, Retina
EyeOuter Nuclear LayerMature M-S Cone CellsPhotoreceptors, Retina
EyeOuter Nuclear LayerMature S Cone CellsPhotoreceptors, Retina
EyeOuter Nuclear LayerMature L Cone CellsPhotoreceptors, Retina
HeartAtrioventricular CanalAtrioventricular Canal CellsMyocardium
HeartEndocardiumEndocardial Tube CellsEndocardium
Expression: Positive    Negative     Selective marker
Experimental details: Curated     Microarrays     In-situ hybridization

See GNGT2 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for GNGT2

SOURCE GeneReport for Unigene cluster: Hs.181781

UniProtKB/Swiss-Prot: GBGT2_HUMAN, O14610
Tissue specificity: Retinal cones

    SABiosciences Expression via Pathway-Focused PCR Array including GNGT2: 
          Alzheimer's Disease in human mouse rat

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In Situ
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Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GNGT2

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for GNGT2 gene from 4/9 species (see all 9)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
mouse
(Mus musculus)
Mammalia Gngt21 , 5 guanine nucleotide binding protein (G protein), gamma more1, 5 85.02(n)1
82.61(a)1
  11 (59.01 cM)5
147101  NM_001038664.21  NP_001033753.21 
 958372165 
chicken
(Gallus gallus)
Aves LOC1008591791 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit more 74.4(n)
73.91(a)
  100859179  XM_003642789.1  XP_003642837.1 
lizard
(Anolis carolinensis)
Reptilia GNGT26
--
72(a)
1 ↔ 1
6(76182970-76184287)
zebrafish
(Danio rerio)
Actinopterygii gngt22 guanine nucleotide binding protein (G protein), gamma more 72.97(n)   335655  BC059612.1 


ENSEMBL Gene Tree for GNGT2 (if available)
TreeFam Gene Tree for GNGT2 (if available) 

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
Paralogs for GNGT2 gene
GNGT12  GNG112  
11 SIMAP similar genes for GNGT2 using alignment to 2 protein entries:     GBGT2_HUMAN (see all proteins):
GNGT1    GNG11    DKFZp762E193    GNG12    GNG7    GNG4
GNG2    GNG3    GNG8    GNG5    GNG10

GNGT2 for paralogs           About GeneDecksing



(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
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10/106 NCBI SNPs in GNGT2 are shown (see all 106    About this table
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 17 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs47936121,2
C,F,H--42649864(+) CTAAAT/CTCCAT 4 -- ds50018Minor allele frequency- C:0.01NS EA NA 990
rs733383901,2
C--42650425(+) GGGGGT/CCTAGG 4 -- ut313Minor allele frequency- C:0.01WA EU 713
rs1113008301,2
F--42650627(+) AAAAAG/ATGTTT 4 -- int12Minor allele frequency- A:0.50CSA 4
rs572571731,2
C--42651860(+) GCACTC/TCAGCC 4 -- int11Minor allele frequency- T:0.50WA 2
rs118709071,2
H--42652168(+) aggcgA/Ccaaga 6 -- us2k1 int10--------
rs779393961,2
C,F--42652600(+) CAAGTC/AACTTG 6 -- us2k1 ut511Minor allele frequency- A:0.10WA 118
rs37443191,2
C,F,H--42652744(+) TCACCC/TGCTTG 6 -- us2k1 int17Minor allele frequency- T:0.01EA NA NS 1814
rs124505311,2
C,H--42652812(+) AAACGC/TGAAAA 6 -- us2k1 int15Minor allele frequency- T:0.00NS EA NA 422
rs22333591,2
C,F,H--42653327(+) NNNNCC/TTGCTC 6 -- us2k1 int117Minor allele frequency- T:0.03NS EA NA 1982
rs22333631,2
H--42653837(+) GGCAAC/TCTCTC 6 -- us2k1 int14Minor allele frequency- T:0.00NS EA 420

HapMap Linkage Disequilibrium report for GNGT2 (47280153 - 47287936 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
      Database of Genomic Variants (DGV) variations for GNGT2: --

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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GNGT2 for disorders           About GeneDecksing

OMIM gene information: 139391    OMIM disorders: --

6 diseases for GNGT2:    About MalaCards
cll/sll    cone-rod dystrophy    retinitis    huntington's disease
colorectal cancer    breast cancer

1 disease from the University of Copenhagen DISEASES database for GNGT2:
CLL/SLL

Export disorders for GNGT2 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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PubMed articles for GNGT2 gene, integrated from 9 sources (see all 20):
(articles sorted by number of sources associating them with GNGT2)
    Utopia: connect your pdf to the dynamic
world of online information

  1. Gene structure and chromosome localization of the G gamma c subunit of human cone G-protein (GNGT2). (PubMed id 9286705)1, 2, 3, 9 Ong O.C.... Fung B.K.-K. (1997)
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
  3. Identification of a region in G protein gamma subunits conserved across species but hypervariable among subunit isoforms. (PubMed id 11714923)1, 2 Cook L.A....Hildebrandt J.D. (2001)
  4. beta-Arrestin1 interacts with the G-protein subunits beta1gamma2 and promotes beta1gamma2-dependent Akt signalling for NF-kappaB activation. (PubMed id 18729826)1 Yang M....Ye R.D. (2009)
  5. Gbeta3 forms distinct dimers with specific Ggamma subunits and preferentially activates the beta3 isoform of phospholipase C. (PubMed id 19168127)1 Poon L.S....Wong Y.H. (2009)
  6. Role of molecular chaperones in G protein beta5/regul ator of G protein signaling dimer assembly and G protein betagamma dimer specif icity. (PubMed id 19376773)1 Howlett A.C....Willardson B.M. (2009)
  7. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PubMed id 17207965)1 Lamesch P.... Vidal M. (2007)
  8. Evidence for association of GABA(B) receptors with Kir3 channels and regulators of G protein signalling (RGS4) proteins. (PubMed id 17185339)1 Fowler C.E....Slesinger P.A. (2007)
  9. The molecular basis for T-type Ca2+ channel inhibition by G protein beta2gamma2 subunits. (PubMed id 16973746)1 DePuy S.D....Barrett P.Q. (2006)
  10. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (2006)

(in PubMed, OMIM, and NCBI Bookshelf)
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(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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Entrez Gene: 2793 HGNC: 4412 AceView: GNGT2 Ensembl:ENSG00000167083 euGenes: HUgn2793
ECgene: GNGT2 Kegg: 2793 H-InvDB: GNGT2

(According to HUGE)
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  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
NameDescription
PharmGKB entry for GNGT2 Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
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Patent Information for GNGT2 gene:
Search GeneIP for patents involving GNGT2

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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