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Aliases & Descriptions for GNB2L1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| Gnb2-rs1 1, 2 | | H12.3 1, 2 | | HLC-7 2, 3 | | PIG21 2 | | RACK1 1, 2, 3 |
| | | Descriptions |
|---|
| Cell proliferation-inducing gene 21 protein 3 | Guanine nucleotide-binding protein subunit beta-like protein 12.3 3 | | Human lung cancer oncogene 7 protein 3 | | Receptor for Activated C Kinase 1 2 | | Receptor for activated C kinase 3 | | Receptor of activated protein kinase C 1 3 | guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 2 | | lung cancer oncogene 7 2 | | proliferation-inducing gene 21 2 | protein homologous to chicken B complex protein, guanine nucleotide binding 2 |
|
| | Search outside databases for aliases for GNB2L1 genePrevious GC identifers: GC05M180713 GC05P181694 GC05M180773 |
Summaries for GNB2L1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: GBLP_HUMAN, P63244Function: Seems to bind protein kinase C acting as an intracellular receptor to anchor the activated PKC to the cytoskeleton. May be involved in up-regulation of the activity of kinases such as PKC via binding to KRT1. Together with KRT1 and ITGB1, serves as a platform for SRC activation or inactivation. May play an important role in the developing brain and neuronal differentiationGene Wiki entry for GNB2L1 |
Genomic Location for GNB2L1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the GNB2L1 gene 
Entrez Gene cytogenetic band: 5q35.3 Ensembl cytogenetic band: 5q35.3 HGNC cytogenetic band: 5q35.3GNB2L1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05M180596:
(about GC identifiers)
Start:
|
180,596,534 bp from pter |
End:
|
180,603,512 bp from pter |
Size:
|
6,979 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000005.8 NT_023133.12
| Proteins for GNB2L1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: GBLP_HUMAN, P63244 (See
protein sequence)Recommended Name: Guanine nucleotide-binding protein subunit beta-2-like 1 Size: 317 amino acids; 35077 Da
Subunit: Binds SLC9A3R1. Forms a ternary complex with TRIM63 and PRKCE. Interacts with HABP4 and KRT1
Subcellular location: Cell membrane. Note=Located on plasma membrane of neuroblastoma NMB7 cells
Sequence caution: Sequence=AAR24619.1; Type=Frameshift; Positions=94;
Secondary accessions: B3KTJ0 P25388 P99049 Q53HU2 Q5J8M6 Q5VLR4 Q6FH47Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_006089.1
ENSEMBL proteins: ENSP00000374250 ENSP00000366013
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: GNB2L1 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for GNB2L1: Assays for GNB2L1: | Protein
Domains/ Families for GNB2L1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P63244
ProtoNet protein and cluster: P63244 UniProtKB/Swiss-Prot: GBLP_HUMAN, P63244Domain: The WD repeats domain 5 mediates interaction with TRIM63Similarity: Belongs to the WD repeat G protein beta familySimilarity: Contains 7 WD repeats | Gene Function for GNB2L1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006098
Applied Biosystems Silencer® siRNAs for GNB2L1
Sigma-Aldrich siRNA for GNB2L1  Sigma-Aldrich shRNA for GNB2L1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_006098                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_006098                                  untagged cDNA clone in CMV expression vector: NM_006098 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_006098
UniProtKB/Swiss-Prot: GBLP_HUMAN, P63244Function: Seems to bind protein kinase C acting as an intracellular receptor to anchor the activated PKC to the cytoskeleton. May be involved in up-regulation of the activity of kinases such as PKC via binding to KRT1. Together with KRT1 and ITGB1, serves as a platform for SRC activation or inactivation. May play an important role in the developing brain and neuronal differentiationGenatlas biochemistry entry for GNB2L1:guanine nucleotide binding protein (G protein),beta 2 like 1,involved in membrane aanchorage of protein kinase C,homolog of a beta subunit implicated in membrane anchorage of the beta adrenergic receptor2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for GNB2L1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/18 Sigma-Aldrich "Your Favorite Gene" Pathways for GNB2L1 (Your Favorite Gene powered by Ingenuity) (see all 18
) 
Gene Network CentralTM Interacting Genes and Proteins Network for GNB2L1 
5/12 Interacting proteins for GNB2L1 (P632441, 2) via UniProtKB, MINT, and/or STRING (see all 12
)About this table
|
Drugs & Compounds for GNB2L1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for GNB2L1 10/11 Novoseek chemical compound relationships for GNB2L1 gene (see all 11
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| phorbol-12-myristate |
56.30 |
3 |
14699138 (1), 11543740 (1), 18621736 (1) |
| geranylgeranyl pyrophosphate |
55.27 |
5 |
12506405 (3), 15039989 (1), 15796907 (1) |
| 17-(allylamino)-17-demethoxygeldanamycin |
52.82 |
2 |
17244529 (1), 17361105 (1) |
| pmas |
51.49 |
1 |
12963340 (1) |
| tyrosine |
44.09 |
38 |
12400005 (6), 17108144 (3), 11279199 (3), 15184885 (2) (see all 18) |
| threonine |
34.47 |
2 |
11279199 (1) |
| farnesyl diphosphate |
33.74 |
3 |
12506405 (2), 15039989 (1) |
| inositol 1,4,5 trisphosphate |
16.20 |
6 |
14983009 (2), 10529223 (1), 18755685 (1) |
| oligonucleotide |
11.43 |
2 |
16797713 (1), 12437589 (1) |
| calcium |
0.00 |
11 |
14983009 (4), 16399894 (1), 17965024 (1), 18755685 (1) (see all 5) |
About this table
|
Transcripts for GNB2L1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006098
Sigma-Aldrich siRNA for GNB2L1  Sigma-Aldrich shRNA for GNB2L1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_006098 REFSEQ mRNAs for GNB2L1 gene: NM_006098.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_006098               OriGene GFP tagged cDNA clone in CMV expression vector: NM_006098                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_006098                                  untagged cDNA clone in CMV expression vector: NM_006098  Additional cDNA sequence: AK095666.1 AK222488.1 AK301029.1 AK301468.1 AK303316.1 AK310916.1 AY336089.1 BC000214.1 BC000366.2 BC010119.2 BC014256.1 BC014788.1 BC017287.2 BC019093.2 BC019362.1 BC021993.1 BC029996.1 BC032006.1 BC035460.1 CR456978.1 CR541909.1 CR590014.1 CR593549.1 CR594004.1 CR594601.1 CR594655.1 CR595309.1 CR597784.1 CR597855.1 CR600581.1 CR601263.1 CR602411.1 CR603958.1 CR604041.1 CR604224.1 CR604544.1 CR605891.1 CR607176.1 CR608645.1 CR609042.1 CR609331.1 CR610245.1 CR610585.1 CR610887.1 CR613365.1 CR614554.1 CR614855.1 CR616147.1 CR616532.1 CR616617.1 CR619321.1 CR619604.1 CR621372.1 CR621495.1 CR623655.1 CR623659.1 CR624382.1 CR625098.1 CR625157.1 CR625826.1 D28398.1 M24194.1 24/140 DOTS entries (see all 140
): DT.91782798 DT.100737153 DT.100737098 DT.95216507 DT.100060394 DT.100737139 DT.100737172 DT.100842309 DT.100737103 DT.100060381 DT.100737124 DT.97869752 DT.100737146 DT.100060385 DT.100737092 DT.120826223 DT.92324968 DT.95268530 DT.91936705 DT.100737128 DT.95268502 DT.91972228 DT.95157167 DT.120826313 24/4437 AceView cDNA sequences (see all 4437
):CD109003 BM455679 BM833181 BM834700 BM910524 BU155986 BE795337 BQ899108 BF983905 BM822766 CB123806 BG913073 AA505903 BM746984 CB138988 BU175557 AW366717 CB146287 BM920752 BE301803 BM561158 BG332115 BQ962316 BI116034
highest scoring ESTs for GNB2L1:BG437721 CB133236 D28398 AA314173 AA341655 AJ713273 AJ713395 AW248369 AW606093 BE265380 Unigene Cluster for GNB2L1: Guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 Hs.5662 [show with all ESTs]Unigene Representative Sequence: BF312441
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations: ENST00000389599
ENST00000376817
|
Expression for GNB2L1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| GNB2L1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for GNB2L1
1 / 2 / 3 7 probe-sets matching GNB2L1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTATGGGATC
SOURCE GeneReport for Unigene cluster: Hs.5662
Expression variation in blood from EXPOLDB for GNB2L1 |
Orthologs for GNB2L1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for GNB2L1 gene from 5/27 species (see all 27
)
About this table Species with no ortholog for GNB2L1
ENSEMBL Gene Tree for GNB2L1 | Paralogs for GNB2L1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for GNB2L1 gene
- WDR51B2 WDR51A2
|
SNPs/Variants for GNB2L1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for GNB2L1 (up to first 250kb)
|
Disorders & Mutations for GNB2L1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 176981
9 Novoseek disease relationships for GNB2L1 gene
About this table
|
Medical News for GNB2L1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for GNB2L1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/186 PubMed articles for GNB2L1 gene (see all 186
):- Physical linkage of a guanine nucleotide-binding protein-related gene to the chicken major histocompatibility complex. (PubMed id 2499885)2, 3, 4 Guillemot F....Auffray C. (1989)
- Cloning of an intracellular receptor for protein kinase C: a homolog of the beta subunit of G proteins. (PubMed id 8302854)1, 2, 3 Ron D....Mochly-Rosen D. (1994)
- Ki-1/57 interacts with RACK1 and is a substrate for the phosphorylation by phorbol 12-myristate 13-acetate-activated protein kinase C. (PubMed id 14699138)1, 3, 4 Nery F.C.... Kobarg J. (2004)
- Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455)3, 4 Rush J.... Comb M.J. (2005)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)3, 4 Ota T....Sugano S. (2004)
- Muscle ring finger protein-1 inhibits PKC-epsilon activation and prevents cardiomyocyte hypertrophy. (PubMed id 15596539)3, 4 Arya R....Patterson C. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Protein kinase C epsilon-dependent regulation of cystic fibrosis transmembrane regulator involves binding to a receptor for activated C kinase (RACK1) and RACK1 binding to Na+/H+ exchange regulatory factor. (PubMed id 11956211)3, 4 Liedtke C.M.... Wang D. (2002)
- Insulin-like growth factor I controls a mutually exclusive association of RACK1 with protein phosphatase 2A and beta1 integrin to promote cell migration. (PubMed id 16705158)1, 3 Kiely P.A....O'Connor R. (2006)
- RACK1: a novel substrate for the Src protein-tyrosine kinase. (PubMed id 12400005)1, 3 Chang B.Y....Cartwright C.A. (2002)
|
Search for GNB2L1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing GNB2L1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing GNB2L1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing GNB2L1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for GNB2L1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for GNB2L1:

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Incremental update: 13 Oct 2009
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