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Aliases for GC22P032635 Gene

Subcategory (RNA class) for GC22P032635 Gene

snoRNA

Quality Score for this RNA gene is

1

Aliases for GC22P032635 Gene

No Aliases found

ORGUL Members for GC22P032635 Gene

No data available for External Ids for GC22P032635 Gene

Summaries for GC22P032635 Gene

GeneCards Summary for GC22P032635 Gene

GC22P032635 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC22P032635 Gene

  • snoRNA: A snoRNA (small nucleolar RNA) is any one of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC22P032635 Gene

Genomics for GC22P032635 Gene

Regulatory Elements for GC22P032635 Gene

Enhancers for GC22P032635 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G032621 1.5 Ensembl ENCODE dbSUPER 0.4 -11.9 -11930 4.2 PKNOX1 FOXA2 ARID4B FEZF1 GLIS2 SP5 TSHZ1 ZNF623 KAT8 PPARGC1A TIMP3 LL22NC03-104C7.1 ENSG00000229673 BPIFC GC22P032635 LOC105373003
GH22G032616 1.4 Ensembl ENCODE dbSUPER 0.4 -16.4 -16392 4.2 ZNF48 RAD21 RARA YY1 GATA2 FOS MIXL1 NR2F2 NFIC ZNF585B LL22NC03-104C7.1 TIMP3 ENSG00000229673 BPIFC GC22P032635 LOC105373003
GH22G032628 1.3 Ensembl ENCODE dbSUPER 0.4 -5.8 -5797 2.5 CTCF ZNF175 CEBPG ZNF514 RAD21 RARA ZNF766 NCOR1 HNF4G SMC3 TIMP3 LL22NC03-104C7.1 ENSG00000229673 GC22P032635 LOC105373003
GH22G032617 0.9 ENCODE dbSUPER 0.4 -18.6 -18574 0.1 SOX5 SOX13 TFAP4 SP5 SMAD4 NR2F6 RAD21 ZNF48 RARA RPS17P16 GC22P032635 LOC105373003
GH22G032631 0.5 dbSUPER 0.7 -2.3 -2271 2.2 ZNF664 ZMYM3 ATF2 NR2F2 TIMP3 ENSG00000229673 GC22P032635 LOC105373003
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC22P032635 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC22P032635 Gene

Chromosome:
22
Start:
32,635,025 bp from pter
End:
32,635,202 bp from pter
Size:
178 bases
Orientation:
Plus strand

Genomic View for GC22P032635 Gene

Genes around GC22P032635 on UCSC Golden Path with GeneCards custom track

GC22P032635 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC22P032635 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC22P032635 Gene

Proteins for GC22P032635 Gene

Post-translational modifications for GC22P032635 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC22P032635 Gene

Domains & Families for GC22P032635 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC22P032635 Gene

Function for GC22P032635 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC22P032635 Gene

Localization for GC22P032635 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC22P032635 Gene

Pathways & Interactions for GC22P032635 Gene

SuperPathways for GC22P032635 Gene

No Data Available

Interacting Proteins for GC22P032635 Gene

Gene Ontology (GO) - Biological Process for GC22P032635 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC22P032635 Gene

Drugs & Compounds for GC22P032635 Gene

No Compound Related Data Available

Transcripts for GC22P032635 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC22P032635 Gene

No ASD Table

Relevant External Links for GC22P032635 Gene

GeneLoc Exon Structure for
GC22P032635

No data available for mRNA/cDNA for GC22P032635 Gene

Expression for GC22P032635 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC22P032635 Gene

Orthologs for GC22P032635 Gene

No data available for Orthologs and Evolution for GC22P032635 Gene

Paralogs for GC22P032635 Gene

No data available for Paralogs for GC22P032635 Gene

Variants for GC22P032635 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC22P032635 Gene

Disorders for GC22P032635 Gene

No disorders were found for GC22P032635 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC22P032635 Gene

Publications for GC22P032635 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) . … Gojobori T. (Nucleic Acids Res. 2008) 1
  2. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T. … Sugano S. (PLoS Biol. 2004) 1
  4. Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes. (PMID: 10736225) Gaspin C. … Bachellerie J.P. (J. Mol. Biol. 2000) 1
  5. The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. (PMID: 8797828) Balakin A.G. … Fournier M.J. (Cell 1996) 1

Products for GC22P032635 Gene

Sources for GC22P032635 Gene

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