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Aliases for GC22M041593 Gene

Subcategory (RNA class) for GC22M041593 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC22M041593 Gene

No Aliases found

ORGUL Members for GC22M041593 Gene

No data available for External Ids for GC22M041593 Gene

Summaries for GC22M041593 Gene

GeneCards Summary for GC22M041593 Gene

GC22M041593 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC22M041593 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC22M041593 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC22M041593 Gene

Genomics for GC22M041593 Gene

Regulatory Elements for GC22M041593 Gene

Enhancers for GC22M041593 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H041374 0.4 dbSUPER 0.7 +2.2 2168 1 ZNF121 ENSG00000235513 CSDC2 GC22M041593 RNU6-495P LOC100996598
GH22H041370 0.4 dbSUPER 0.4 +5.4 5372 2 ZSCAN29 POLR3H MEI1 ENSG00000235513 ENSG00000227370 CHADL LOC100996598 RNU6-495P GC22M041593
GH22H041376 0.2 dbSUPER 0.7 +0.0 34 2 POLR3H DESI1 CSDC2 GC22M041593 RNU6-495P LOC100996598
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC22M041593 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC22M041593 Gene

Chromosome:
22
Start:
41,377,176 bp from pter
End:
41,377,283 bp from pter
Size:
108 bases
Orientation:
Minus strand

Genomic View for GC22M041593 Gene

Genes around GC22M041593 on UCSC Golden Path with GeneCards custom track

GC22M041593 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC22M041593 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC22M041593 Gene

Proteins for GC22M041593 Gene

Post-translational modifications for GC22M041593 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC22M041593 Gene

Domains & Families for GC22M041593 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC22M041593 Gene

Function for GC22M041593 Gene

Phenotypes From GWAS Catalog for GC22M041593 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC22M041593 Gene

Localization for GC22M041593 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC22M041593 Gene

Pathways & Interactions for GC22M041593 Gene

SuperPathways for GC22M041593 Gene

No Data Available

Interacting Proteins for GC22M041593 Gene

Gene Ontology (GO) - Biological Process for GC22M041593 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC22M041593 Gene

Drugs & Compounds for GC22M041593 Gene

No Compound Related Data Available

Transcripts for GC22M041593 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC22M041593 Gene

No ASD Table

Relevant External Links for GC22M041593 Gene

GeneLoc Exon Structure for
GC22M041593

No data available for mRNA/cDNA for GC22M041593 Gene

Expression for GC22M041593 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC22M041593 Gene

Orthologs for GC22M041593 Gene

No data available for Orthologs and Evolution for GC22M041593 Gene

Paralogs for GC22M041593 Gene

No data available for Paralogs for GC22M041593 Gene

Variants for GC22M041593 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC22M041593 Gene

Disorders for GC22M041593 Gene

No disorders were found for GC22M041593 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC22M041593 Gene

Publications for GC22M041593 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC22M041593 Gene

Sources for GC22M041593 Gene

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