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Aliases for GC20P064162 Gene

Subcategory (RNA class) for GC20P064162 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for GC20P064162 Gene

No Aliases found

ORGUL Members for GC20P064162 Gene

No data available for External Ids for GC20P064162 Gene

Summaries for GC20P064162 Gene

GeneCards Summary for GC20P064162 Gene

GC20P064162 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC20P064162 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC20P064162 Gene

Genomics for GC20P064162 Gene

Regulatory Elements for GC20P064162 Gene

Enhancers for GC20P064162 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G064160 1.3 ENCODE dbSUPER 0.7 -1.6 -1618 1.2 ARID4B SIN3A ZNF2 ZNF143 ZNF207 KLF13 DEK SP3 SP5 MXD4 LKAAEAR1 OPRL1 RGS19 GC20P064163 GC20P064162 MYT1
GH20G064161 1.2 ENCODE dbSUPER 0.7 -0.3 -271 0.2 MLX ZFP64 ARID4B SIN3A ZNF48 SLC30A9 ZNF143 SP5 MXD4 NFYC GC20P064163 GC20P064162 MYT1
GH20G064164 1.2 ENCODE dbSUPER 0.7 +1.9 1930 0.2 AGO1 ARID4B SIN3A ZNF48 SLC30A9 GLIS2 SP3 SP5 MXD4 PPARG GC20P064162 GC20P064163 GC20M064230
GH20G064188 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +27.2 27169 2.0 PKNOX1 FOXA2 ATF1 ARID4B SIN3A DMAP1 SLC30A9 ZNF121 GLIS2 ZNF143 MYT1 PCMTD2 GC20P064162 GC20P064163 GC20M064230
GH20G064158 0.7 dbSUPER 0.7 -3.0 -3000 0.9 PKNOX1 ZNF133 JUN ZSCAN4 PAX8 ZFHX2 ZNF316 FOS NFE2 MAFK LKAAEAR1 RGS19 OPRL1 GC20P064163 GC20P064162 MYT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC20P064162 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC20P064162 Gene

Chromosome:
20
Start:
64,162,333 bp from pter
End:
64,162,642 bp from pter
Size:
310 bases
Orientation:
Plus strand

Genomic View for GC20P064162 Gene

Genes around GC20P064162 on UCSC Golden Path with GeneCards custom track

GC20P064162 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC20P064162 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC20P064162 Gene

Proteins for GC20P064162 Gene

Post-translational modifications for GC20P064162 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC20P064162 Gene

Domains & Families for GC20P064162 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC20P064162 Gene

Function for GC20P064162 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC20P064162 Gene

Localization for GC20P064162 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC20P064162 Gene

Pathways & Interactions for GC20P064162 Gene

SuperPathways for GC20P064162 Gene

No Data Available

Interacting Proteins for GC20P064162 Gene

Gene Ontology (GO) - Biological Process for GC20P064162 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC20P064162 Gene

Drugs & Compounds for GC20P064162 Gene

No Compound Related Data Available

Transcripts for GC20P064162 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC20P064162 Gene

No ASD Table

Relevant External Links for GC20P064162 Gene

GeneLoc Exon Structure for
GC20P064162

No data available for mRNA/cDNA for GC20P064162 Gene

Expression for GC20P064162 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC20P064162 Gene

Orthologs for GC20P064162 Gene

No data available for Orthologs and Evolution for GC20P064162 Gene

Paralogs for GC20P064162 Gene

No data available for Paralogs for GC20P064162 Gene

Variants for GC20P064162 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC20P064162 Gene

Disorders for GC20P064162 Gene

No disorders were found for GC20P064162 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC20P064162 Gene

Publications for GC20P064162 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) . … Gojobori T. (Nucleic Acids Res. 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T. … Sugano S. (PLoS Biol. 2004) 1

Products for GC20P064162 Gene

Sources for GC20P064162 Gene

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