Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC20P056216 Gene

Subcategory (RNA class) for GC20P056216 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC20P056216 Gene

No Aliases found

ORGUL Members for GC20P056216 Gene

No data available for External Ids for GC20P056216 Gene

Summaries for GC20P056216 Gene

GeneCards Summary for GC20P056216 Gene

GC20P056216 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC20P056216 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC20P056216

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC20P056216 Gene

Genomics for GC20P056216 Gene

Regulatory Elements for GC20P056216 Gene

Enhancers for GC20P056216 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G056220 0.6 ENCODE 0.4 +5.7 5668 3.8 ZNF146 NFXL1 ATF2 E2F1 NBN FOSL2 ETV6 FOS MYC GC20P056216 MC3R
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC20P056216 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC20P056216 Gene

Chromosome:
20
Start:
56,216,277 bp from pter
End:
56,216,311 bp from pter
Size:
35 bases
Orientation:
Plus strand

Genomic View for GC20P056216 Gene

Genes around GC20P056216 on UCSC Golden Path with GeneCards custom track

GC20P056216 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC20P056216 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC20P056216 Gene

ORGUL Member Location for GC20P056216 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC20P056216 Gene

Proteins for GC20P056216 Gene

Post-translational modifications for GC20P056216 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC20P056216 Gene

Domains & Families for GC20P056216 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC20P056216 Gene

Function for GC20P056216 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC20P056216 Gene

Localization for GC20P056216 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC20P056216 Gene

Pathways & Interactions for GC20P056216 Gene

SuperPathways for GC20P056216 Gene

No Data Available

Interacting Proteins for GC20P056216 Gene

Gene Ontology (GO) - Biological Process for GC20P056216 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC20P056216 Gene

Drugs & Compounds for GC20P056216 Gene

No Compound Related Data Available

Transcripts for GC20P056216 Gene

fRNAdb Secondary structures for GC20P056216 Gene

  • FR075994
  • FR396016

Alternative Splicing Database (ASD) splice patterns (SP) for GC20P056216 Gene

No ASD Table

Relevant External Links for GC20P056216 Gene

GeneLoc Exon Structure for
GC20P056216

No data available for mRNA/cDNA for GC20P056216 Gene

Expression for GC20P056216 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC20P056216 Gene

Orthologs for GC20P056216 Gene

No data available for Orthologs and Evolution for GC20P056216 Gene

Paralogs for GC20P056216 Gene

No data available for Paralogs for GC20P056216 Gene

Variants for GC20P056216 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC20P056216 Gene

Disorders for GC20P056216 Gene

No disorders were found for GC20P056216 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC20P056216 Gene

Publications for GC20P056216 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC20P056216 Gene

Sources for GC20P056216 Gene

Content
Loading form....