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Aliases for GC20M034527 Gene

Subcategory (RNA class) for GC20M034527 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC20M034527 Gene

No Aliases found

ORGUL Members for GC20M034527 Gene

No data available for External Ids for GC20M034527 Gene

Summaries for GC20M034527 Gene

GeneCards Summary for GC20M034527 Gene

GC20M034527 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC20M034527 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC20M034527 Gene

Genomics for GC20M034527 Gene

Regulatory Elements for GC20M034527 Gene

Enhancers for GC20M034527 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20H034522 1.6 Ensembl ENCODE dbSUPER 0.7 +1.6 1580 5 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B SLC30A9 ZNF143 MAP1LC3A NCOA6 ZNF341-AS1 ACTL10 ITCH TP53INP2 ENSG00000231034 PIGU ENSG00000206582 GC20M034527
GH20H034538 1.1 ENCODE dbSUPER 0.4 -12.2 -12226 0 ARNT ZFP64 ARID4B THRB RAD21 RARA SCRT2 ZNF207 ZNF143 THAP11 TP53INP2 ENSG00000231034 PIGU DYNLRB1 GC20P034543 ENSG00000206582 GC20M034527
GH20H034528 0.6 dbSUPER 0.7 -4.3 -4307 5 ZNF121 CTCF ZFHX2 FOXA2 MNT EGR2 MAP1LC3A ITCH TP53INP2 ENSG00000231034 PIGU ENSG00000206582 GC20M034527 GC20P034543
GH20H034537 0.7 dbSUPER 0.4 -11.0 -11022 1 CTCF PKNOX1 ZNF792 SAP130 ARID4B MAX ZNF2 RAD21 ZNF316 SMC3 TP53INP2 ENSG00000231034 PIGU DYNLRB1 GC20P034543 ENSG00000206582 GC20M034527
GH20H034539 0.4 dbSUPER 0.4 -14.0 -13981 1 ZNF133 TP53INP2 ENSG00000231034 PIGU NCOA6 GC20P034543 ENSG00000206582 GC20M034527
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC20M034527 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC20M034527 Gene

Chromosome:
20
Start:
34,526,511 bp from pter
End:
34,526,606 bp from pter
Size:
96 bases
Orientation:
Minus strand

Genomic View for GC20M034527 Gene

Genes around GC20M034527 on UCSC Golden Path with GeneCards custom track

GC20M034527 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC20M034527 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC20M034527 Gene

Proteins for GC20M034527 Gene

Post-translational modifications for GC20M034527 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC20M034527 Gene

Domains & Families for GC20M034527 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC20M034527 Gene

Function for GC20M034527 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC20M034527 Gene

Localization for GC20M034527 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC20M034527 Gene

Pathways & Interactions for GC20M034527 Gene

SuperPathways for GC20M034527 Gene

No Data Available

Interacting Proteins for GC20M034527 Gene

Gene Ontology (GO) - Biological Process for GC20M034527 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC20M034527 Gene

Drugs & Compounds for GC20M034527 Gene

No Compound Related Data Available

Transcripts for GC20M034527 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC20M034527 Gene

No ASD Table

Relevant External Links for GC20M034527 Gene

GeneLoc Exon Structure for
GC20M034527

No data available for mRNA/cDNA for GC20M034527 Gene

Expression for GC20M034527 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC20M034527 Gene

Orthologs for GC20M034527 Gene

No data available for Orthologs and Evolution for GC20M034527 Gene

Paralogs for GC20M034527 Gene

No data available for Paralogs for GC20M034527 Gene

Variants for GC20M034527 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC20M034527 Gene

Disorders for GC20M034527 Gene

No disorders were found for GC20M034527 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC20M034527 Gene

Publications for GC20M034527 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC20M034527 Gene

Sources for GC20M034527 Gene

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