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Aliases for GC19P042435 Gene

Subcategory (RNA class) for GC19P042435 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for GC19P042435 Gene

No Aliases found

ORGUL Members for GC19P042435 Gene

No data available for External Ids for GC19P042435 Gene

Summaries for GC19P042435 Gene

GeneCards Summary for GC19P042435 Gene

GC19P042435 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC19P042435 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC19P042435 Gene

Genomics for GC19P042435 Gene

Regulatory Elements for GC19P042435 Gene

Enhancers for GC19P042435 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G042432 1.5 Ensembl ENCODE dbSUPER 0.7 -1.6 -1586 1.8 FOXA2 MLX ZNF493 ARID4B ZNF48 YY1 ZNF766 GATA2 ZNF143 YY2 CNFN RNU4-60P POU2F2 LOC100505622 MEGF8 GC19P042435 LIPE
GH19G042438 1.4 Ensembl ENCODE dbSUPER 0.7 +3.6 3594 0.4 HDAC1 PKNOX1 FOXA2 RB1 ZSCAN4 ARID4B RAD21 ZNF143 CREM MIXL1 MEGF8 CXCL17 GC19P042435
GH19G042440 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.9 7858 5.3 FOXA2 ARID4B DMAP1 ZNF48 YY1 ZNF416 ZNF143 PPARG KAT8 GLIS1 ZNF574 LIPE-AS1 CNFN CXCL17 PSG8 ENSG00000268355 CD177 GC19P042435
GH19G042437 0.4 dbSUPER 0.7 +2.6 2645 0.5 ZNF18 GC19P042435 CXCL17
GH19G042427 0.5 ENCODE dbSUPER 0.4 -7.6 -7553 0.2 LIPE GC19P042435
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC19P042435 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC19P042435 Gene

Chromosome:
19
Start:
42,435,096 bp from pter
End:
42,435,126 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for GC19P042435 Gene

Genes around GC19P042435 on UCSC Golden Path with GeneCards custom track

GC19P042435 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC19P042435 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC19P042435 Gene

ORGUL Member Location for GC19P042435 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC19P042435 Gene

Proteins for GC19P042435 Gene

Post-translational modifications for GC19P042435 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC19P042435 Gene

Domains & Families for GC19P042435 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC19P042435 Gene

Function for GC19P042435 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC19P042435 Gene

Localization for GC19P042435 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC19P042435 Gene

Pathways & Interactions for GC19P042435 Gene

SuperPathways for GC19P042435 Gene

No Data Available

Interacting Proteins for GC19P042435 Gene

Gene Ontology (GO) - Biological Process for GC19P042435 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC19P042435 Gene

Drugs & Compounds for GC19P042435 Gene

No Compound Related Data Available

Transcripts for GC19P042435 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC19P042435 Gene

No ASD Table

Relevant External Links for GC19P042435 Gene

GeneLoc Exon Structure for
GC19P042435

No data available for mRNA/cDNA for GC19P042435 Gene

Expression for GC19P042435 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC19P042435 Gene

Orthologs for GC19P042435 Gene

No data available for Orthologs and Evolution for GC19P042435 Gene

Paralogs for GC19P042435 Gene

No data available for Paralogs for GC19P042435 Gene

Variants for GC19P042435 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC19P042435 Gene

Disorders for GC19P042435 Gene

No disorders were found for GC19P042435 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC19P042435 Gene

Publications for GC19P042435 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC19P042435 Gene

Sources for GC19P042435 Gene

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