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Aliases for GC17P047558 Gene

Subcategory (RNA class) for GC17P047558 Gene

Y RNA

Quality Score for this RNA gene is

12

Aliases for GC17P047558 Gene

No Aliases found

ORGUL Members for GC17P047558 Gene

No data available for External Ids for GC17P047558 Gene

Summaries for GC17P047558 Gene

GeneCards Summary for GC17P047558 Gene

GC17P047558 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC17P047558 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC17P047558 Gene

Genomics for GC17P047558 Gene

Regulatory Elements for GC17P047558 Gene

Enhancers for GC17P047558 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H047530 1.6 FANTOM5 ENCODE dbSUPER 0.3 -25.5 -25543 2 HDGF PKNOX1 ARID4B SIN3A ZNF2 GLIS2 SP3 SP5 REST SREBF1 TBKBP1 NPEPPS GC17P047558
GH17H047538 0.5 dbSUPER 0.4 -18.4 -18382 0 OSR2 SCRT2 GFI1B MYNN CEBPB TBKBP1 KPNB1 MRPL45P2 GC17P047558 NPEPPS
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC17P047558 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC17P047558 Gene

Chromosome:
17
Start:
47,557,412 bp from pter
End:
47,557,512 bp from pter
Size:
101 bases
Orientation:
Plus strand

Genomic View for GC17P047558 Gene

Genes around GC17P047558 on UCSC Golden Path with GeneCards custom track

GC17P047558 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P047558 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P047558 Gene

Proteins for GC17P047558 Gene

Post-translational modifications for GC17P047558 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P047558 Gene

Domains & Families for GC17P047558 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P047558 Gene

Function for GC17P047558 Gene

Phenotypes From GWAS Catalog for GC17P047558 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC17P047558 Gene

Localization for GC17P047558 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P047558 Gene

Pathways & Interactions for GC17P047558 Gene

SuperPathways for GC17P047558 Gene

No Data Available

Interacting Proteins for GC17P047558 Gene

Gene Ontology (GO) - Biological Process for GC17P047558 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P047558 Gene

Drugs & Compounds for GC17P047558 Gene

No Compound Related Data Available

Transcripts for GC17P047558 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P047558 Gene

No ASD Table

Relevant External Links for GC17P047558 Gene

GeneLoc Exon Structure for
GC17P047558

No data available for mRNA/cDNA for GC17P047558 Gene

Expression for GC17P047558 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P047558 Gene

Orthologs for GC17P047558 Gene

No data available for Orthologs and Evolution for GC17P047558 Gene

Paralogs for GC17P047558 Gene

No data available for Paralogs for GC17P047558 Gene

Variants for GC17P047558 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC17P047558 Gene

Disorders for GC17P047558 Gene

No disorders were found for GC17P047558 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P047558 Gene

Publications for GC17P047558 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC17P047558 Gene

Sources for GC17P047558 Gene

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