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Aliases for GC17P034213 Gene

Subcategory (RNA class) for GC17P034213 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC17P034213 Gene

No Aliases found

ORGUL Members for GC17P034213 Gene

No data available for External Ids for GC17P034213 Gene

Summaries for GC17P034213 Gene

GeneCards Summary for GC17P034213 Gene

GC17P034213 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC17P034213 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC17P034213

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P034213 Gene

Genomics for GC17P034213 Gene

Regulatory Elements for GC17P034213 Gene

Enhancers for GC17P034213 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G034237 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +27.6 27571 7.2 RAD21 RARA GATA2 ETV6 RELB IKZF2 EGR2 CBFB JUNB GATAD2B CCL7 CCL8 CCL1 ASIC2 CCL2 GC17M034278 GC17P034213
GH17G034233 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +22.1 22099 3.2 MAX REST ZIC2 RAD21 NR2F2 YY1 FOXA1 JUND ATF3 GLIS1 CCL2 CCL1 CCL7 CCL8 GC17M034278 GC17P034213
GH17G034200 0.9 ENCODE 0.4 -13.2 -13199 0.2 ELF3 RB1 TBL1XR1 ARNT ZNF76 KLF17 BRCA1 ZNF2 RAD21 RFX5 CCL1 ASIC2 CCL2 CCL7 CCL8 CCL11 LINC01989 GC17P034213
GH17G034220 0.8 FANTOM5 dbSUPER 0.4 +7.8 7770 0.6 HLF CEBPB CCL7 CCL8 CCL2 GC17P034213 GC17M034278
GH17G034201 0.8 FANTOM5 ENCODE 0.4 -11.9 -11897 0.4 EBF1 CCL7 CCL1 CCL8 LINC01989 GC17P034213
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC17P034213 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC17P034213 Gene

Chromosome:
17
Start:
34,213,315 bp from pter
End:
34,213,348 bp from pter
Size:
34 bases
Orientation:
Plus strand

Genomic View for GC17P034213 Gene

Genes around GC17P034213 on UCSC Golden Path with GeneCards custom track

GC17P034213 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P034213 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17P034213 Gene

ORGUL Member Location for GC17P034213 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P034213 Gene

Proteins for GC17P034213 Gene

Post-translational modifications for GC17P034213 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P034213 Gene

Domains & Families for GC17P034213 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P034213 Gene

Function for GC17P034213 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P034213 Gene

Localization for GC17P034213 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC17P034213 Gene

Pathways & Interactions for GC17P034213 Gene

SuperPathways for GC17P034213 Gene

No Data Available

Interacting Proteins for GC17P034213 Gene

Gene Ontology (GO) - Biological Process for GC17P034213 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P034213 Gene

Drugs & Compounds for GC17P034213 Gene

No Compound Related Data Available

Transcripts for GC17P034213 Gene

fRNAdb Secondary structures for GC17P034213 Gene

  • FR260384
  • FR138338

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P034213 Gene

No ASD Table

Relevant External Links for GC17P034213 Gene

GeneLoc Exon Structure for
GC17P034213

No data available for mRNA/cDNA for GC17P034213 Gene

Expression for GC17P034213 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P034213 Gene

Orthologs for GC17P034213 Gene

No data available for Orthologs and Evolution for GC17P034213 Gene

Paralogs for GC17P034213 Gene

No data available for Paralogs for GC17P034213 Gene

Variants for GC17P034213 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC17P034213 Gene

Disorders for GC17P034213 Gene

No disorders were found for GC17P034213 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P034213 Gene

Publications for GC17P034213 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC17P034213 Gene

Sources for GC17P034213 Gene

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