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Aliases for GC16P024135 Gene

Subcategory (RNA class) for GC16P024135 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC16P024135 Gene

No Aliases found

ORGUL Members for GC16P024135 Gene

No data available for External Ids for GC16P024135 Gene

Summaries for GC16P024135 Gene

GeneCards Summary for GC16P024135 Gene

GC16P024135 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC16P024135 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC16P024135

Additional gene information for GC16P024135 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC16P024135 Gene

Genomics for GC16P024135 Gene

GeneHancer (GH) Regulatory Elements for GC16P024135 Gene

Promoters and enhancers for GC16P024135 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I024135 Enhancer 1 ENCODE 550.8 +0.2 226 1.3 PKNOX1 SMAD1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 E2F8 ATF7 GC16P024135 GC16P024177 PRKCB
GH16I024137 Enhancer 0.6 ENCODE 0.8 +3.2 3231 3.3 CTCF STAT1 JUN BACH1 SP1 FOSL1 JUND POLR2A POU5F1 NFE2 GC16P024135 GC16P024177 PRKCB
GH16I024151 Enhancer 0.5 ENCODE 0.4 +15.7 15681 1 CREB1 KDM1A RUNX3 ZBTB40 GC16P024135 GC16P024177 PRKCB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC16P024135 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC16P024135 Gene

Genomic Locations for GC16P024135 Gene
chr16:24,135,826-24,135,986
(GRCh38/hg38)
Size:
161 bases
Orientation:
Plus strand

Genomic View for GC16P024135 Gene

Genes around GC16P024135 on UCSC Golden Path with GeneCards custom track

GC16P024135 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC16P024135 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC16P024135 Gene

ORGUL Member Location for GC16P024135 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC16P024135 Gene

Proteins for GC16P024135 Gene

Post-translational modifications for GC16P024135 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC16P024135 Gene

Domains & Families for GC16P024135 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC16P024135 Gene

Function for GC16P024135 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC16P024135 Gene

Localization for GC16P024135 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC16P024135 Gene

Pathways & Interactions for GC16P024135 Gene

SuperPathways for GC16P024135 Gene

No Data Available

Interacting Proteins for GC16P024135 Gene

Gene Ontology (GO) - Biological Process for GC16P024135 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC16P024135 Gene

Drugs & Compounds for GC16P024135 Gene

No Compound Related Data Available

Transcripts for GC16P024135 Gene

fRNAdb Secondary structures for GC16P024135 Gene

  • FR085685
  • FR148593

Alternative Splicing Database (ASD) splice patterns (SP) for GC16P024135 Gene

No ASD Table

Relevant External Links for GC16P024135 Gene

GeneLoc Exon Structure for
GC16P024135

No data available for mRNA/cDNA for GC16P024135 Gene

Expression for GC16P024135 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC16P024135 Gene

Orthologs for GC16P024135 Gene

No data available for Orthologs and Evolution for GC16P024135 Gene

Paralogs for GC16P024135 Gene

No data available for Paralogs for GC16P024135 Gene

Variants for GC16P024135 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC16P024135 Gene

Disorders for GC16P024135 Gene

No disorders were found for GC16P024135 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC16P024135 Gene

Publications for GC16P024135 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC16P024135 Gene

Sources for GC16P024135 Gene

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