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Aliases for GC16P002180 Gene

Subcategory (RNA class) for GC16P002180 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC16P002180 Gene

No Aliases found

ORGUL Members for GC16P002180 Gene

No data available for External Ids for GC16P002180 Gene

Summaries for GC16P002180 Gene

GeneCards Summary for GC16P002180 Gene

GC16P002180 is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC16P002180 Gene

Genomics for GC16P002180 Gene

Regulatory Elements for GC16P002180 Gene

Enhancers for GC16P002180 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G002179 1 ENCODE dbSUPER 0.7 -1.5 -1515 0.2 PKNOX1 CBX3 CCNT2 POLR2A EGR1 KLF8 CREM L3MBTL2 RNF2 BHLHE40 GC16P002180 TRAF7
GH16G002147 2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -24.7 -24689 17.4 CREB3L1 MLX AGO1 ZFP64 YBX1 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 JPT2 ENSG00000261505 LOC105371055 ENSG00000260051 ENSG00000255513 TRAF7 SNORA64 IFT140 ZNF213-AS1 ENSG00000260954
GH16G002178 0.8 ENCODE 0.7 -1.8 -1785 0.2 HDGF PKNOX1 KLF1 CBX3 SIN3A CCNT2 CTBP1 EGR1 POLR2A KLF8 GC16P002180 TRAF7
GH16G002169 0.8 FANTOM5 dbSUPER 0.4 -10.5 -10518 0.1 SCRT2 CEBPG RBFOX2 GC16P002180 TRAF7
GH16G002171 0.4 Ensembl 0.4 -9.0 -8979 0.2 AGO1 GC16P002180 TRAF7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC16P002180 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC16P002180 Gene

Chromosome:
16
Start:
2,180,479 bp from pter
End:
2,181,741 bp from pter
Size:
1,263 bases
Orientation:
Plus strand

Genomic View for GC16P002180 Gene

Genes around GC16P002180 on UCSC Golden Path with GeneCards custom track

GC16P002180 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC16P002180 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC16P002180 Gene

Proteins for GC16P002180 Gene

Post-translational modifications for GC16P002180 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC16P002180 Gene

Domains & Families for GC16P002180 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC16P002180 Gene

Function for GC16P002180 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC16P002180 Gene

Localization for GC16P002180 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC16P002180 Gene

Pathways & Interactions for GC16P002180 Gene

SuperPathways for GC16P002180 Gene

No Data Available

Interacting Proteins for GC16P002180 Gene

Gene Ontology (GO) - Biological Process for GC16P002180 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC16P002180 Gene

Drugs & Compounds for GC16P002180 Gene

No Compound Related Data Available

Transcripts for GC16P002180 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC16P002180 Gene

No ASD Table

Relevant External Links for GC16P002180 Gene

GeneLoc Exon Structure for
GC16P002180

No data available for mRNA/cDNA for GC16P002180 Gene

Expression for GC16P002180 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC16P002180 Gene

Orthologs for GC16P002180 Gene

No data available for Orthologs and Evolution for GC16P002180 Gene

Paralogs for GC16P002180 Gene

No data available for Paralogs for GC16P002180 Gene

Variants for GC16P002180 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC16P002180 Gene

Disorders for GC16P002180 Gene

No disorders were found for GC16P002180 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC16P002180 Gene

Publications for GC16P002180 Gene

No publications were found for GC16P002180 Gene.

Products for GC16P002180 Gene

Sources for GC16P002180 Gene

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