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Aliases for GC16M027722 Gene

Subcategory (RNA class) for GC16M027722 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC16M027722 Gene

No Aliases found

ORGUL Members for GC16M027722 Gene

No data available for External Ids for GC16M027722 Gene

Summaries for GC16M027722 Gene

GeneCards Summary for GC16M027722 Gene

GC16M027722 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC16M027722 Gene

Genomics for GC16M027722 Gene

Regulatory Elements for GC16M027722 Gene

Enhancers for GC16M027722 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G027720 1.1 Ensembl ENCODE dbSUPER 0.7 +0.6 590 2.6 TFAP4 NR2F1 HLF MAX EBF1 MYC ZNF652 NR2F2 IL21R-AS1 LOC100128079 GC16M027722 ENSG00000201371
GH16G027719 0.5 dbSUPER 0.7 +2.4 2435 0.5 ZNF316 MAFK FOXP1 GC16M027722 LOC100128079 ENSG00000201371
GH16G027729 0.8 ENCODE dbSUPER 0.4 -7.3 -7283 0.2 NFIC NFIB SCRT2 SPI1 EGR2 GC16M027722 ENSG00000201371 LOC105371157
GH16G027724 0.4 dbSUPER 0.7 -2.4 -2442 0.3 SMARCA4 HLF GC16M027722 ENSG00000201371 LOC105371157
GH16G027725 0.4 dbSUPER 0.7 -2.8 -2817 0.2 POLR2A SMARCA4 ENSG00000201371 GC16M027722 LOC105371157
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC16M027722 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC16M027722 Gene

Chromosome:
16
Start:
27,722,285 bp from pter
End:
27,722,392 bp from pter
Size:
108 bases
Orientation:
Minus strand

Genomic View for GC16M027722 Gene

Genes around GC16M027722 on UCSC Golden Path with GeneCards custom track

GC16M027722 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC16M027722 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC16M027722 Gene

Proteins for GC16M027722 Gene

Post-translational modifications for GC16M027722 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC16M027722 Gene

Domains & Families for GC16M027722 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC16M027722 Gene

Function for GC16M027722 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC16M027722 Gene

Localization for GC16M027722 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC16M027722 Gene

Pathways & Interactions for GC16M027722 Gene

SuperPathways for GC16M027722 Gene

No Data Available

Interacting Proteins for GC16M027722 Gene

Gene Ontology (GO) - Biological Process for GC16M027722 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC16M027722 Gene

Drugs & Compounds for GC16M027722 Gene

No Compound Related Data Available

Transcripts for GC16M027722 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC16M027722 Gene

No ASD Table

Relevant External Links for GC16M027722 Gene

GeneLoc Exon Structure for
GC16M027722

No data available for mRNA/cDNA for GC16M027722 Gene

Expression for GC16M027722 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC16M027722 Gene

Orthologs for GC16M027722 Gene

No data available for Orthologs and Evolution for GC16M027722 Gene

Paralogs for GC16M027722 Gene

No data available for Paralogs for GC16M027722 Gene

Variants for GC16M027722 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC16M027722 Gene

Disorders for GC16M027722 Gene

No disorders were found for GC16M027722 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC16M027722 Gene

Publications for GC16M027722 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC16M027722 Gene

Sources for GC16M027722 Gene

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