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Aliases for GC14M104401 Gene

Subcategory (RNA class) for GC14M104401 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC14M104401 Gene

No Aliases found

ORGUL Members for GC14M104401 Gene

No data available for External Ids for GC14M104401 Gene

Summaries for GC14M104401 Gene

GeneCards Summary for GC14M104401 Gene

GC14M104401 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC14M104401 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC14M104401 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC14M104401 Gene

Genomics for GC14M104401 Gene

Regulatory Elements for GC14M104401 Gene

Enhancers for GC14M104401 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H104391 1.1 FANTOM5 Ensembl ENCODE 0.4 +8.0 8010 3 POLR2A ZNF341 RUNX3 RNU6-684P GC14M104401 ENSG00000258598
GH14H104399 0.5 ENCODE 0.7 +1.0 1016 0 RFX1 SOX6 RCOR1 GC14M104401 RNU6-684P ENSG00000258598
GH14H104389 0.3 FANTOM5 0.4 +11.6 11560 0 C14orf144 C14orf180 RNU6-684P GC14M104401 ENSG00000258598
GH14H104395 0.2 ENCODE 0.4 +5.5 5506 0 RNU6-684P GC14M104401 ENSG00000258598
GH14H104383 0.2 ENCODE 0.4 +17.3 17330 0 ENSG00000258598 GC14M104401 RNU6-684P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC14M104401 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC14M104401 Gene

Chromosome:
14
Start:
104,400,941 bp from pter
End:
104,401,048 bp from pter
Size:
108 bases
Orientation:
Minus strand

Genomic View for GC14M104401 Gene

Genes around GC14M104401 on UCSC Golden Path with GeneCards custom track

GC14M104401 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC14M104401 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC14M104401 Gene

Proteins for GC14M104401 Gene

Post-translational modifications for GC14M104401 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC14M104401 Gene

Domains & Families for GC14M104401 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC14M104401 Gene

Function for GC14M104401 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC14M104401 Gene

Localization for GC14M104401 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC14M104401 Gene

Pathways & Interactions for GC14M104401 Gene

SuperPathways for GC14M104401 Gene

No Data Available

Interacting Proteins for GC14M104401 Gene

Gene Ontology (GO) - Biological Process for GC14M104401 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC14M104401 Gene

Drugs & Compounds for GC14M104401 Gene

No Compound Related Data Available

Transcripts for GC14M104401 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC14M104401 Gene

No ASD Table

Relevant External Links for GC14M104401 Gene

GeneLoc Exon Structure for
GC14M104401

No data available for mRNA/cDNA for GC14M104401 Gene

Expression for GC14M104401 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC14M104401 Gene

Orthologs for GC14M104401 Gene

No data available for Orthologs and Evolution for GC14M104401 Gene

Paralogs for GC14M104401 Gene

No data available for Paralogs for GC14M104401 Gene

Variants for GC14M104401 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC14M104401 Gene

Disorders for GC14M104401 Gene

No disorders were found for GC14M104401 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC14M104401 Gene

Publications for GC14M104401 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC14M104401 Gene

Sources for GC14M104401 Gene

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