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Aliases for GC12P008485 Gene

Subcategory (RNA class) for GC12P008485 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC12P008485 Gene

No Aliases found

ORGUL Members for GC12P008485 Gene

No data available for External Ids for GC12P008485 Gene

Summaries for GC12P008485 Gene

GeneCards Summary for GC12P008485 Gene

GC12P008485 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC12P008485 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12P008485 Gene

Genomics for GC12P008485 Gene

Regulatory Elements for GC12P008485 Gene

Enhancers for GC12P008485 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G008466 0.8 Ensembl 0.4 -18.3 -18318 0.9 PKNOX1 BACH1 CEBPG BMI1 FOSL1 ARID3A GATA2 RELB FOS IKZF2 CLEC4E CLEC6A A2ML1-AS2 A2ML1 CLEC4D RPL15P17 GC12P008485
GH12G008475 0.4 ENCODE 0.4 -8.9 -8912 0.8 POU5F1 CLEC4E GC12P008485 RPL15P17
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC12P008485 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC12P008485 Gene

Chromosome:
12
Start:
8,484,745 bp from pter
End:
8,484,852 bp from pter
Size:
108 bases
Orientation:
Plus strand

Genomic View for GC12P008485 Gene

Genes around GC12P008485 on UCSC Golden Path with GeneCards custom track

GC12P008485 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12P008485 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12P008485 Gene

Proteins for GC12P008485 Gene

Post-translational modifications for GC12P008485 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12P008485 Gene

Domains & Families for GC12P008485 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12P008485 Gene

Function for GC12P008485 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12P008485 Gene

Localization for GC12P008485 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC12P008485 Gene

Pathways & Interactions for GC12P008485 Gene

SuperPathways for GC12P008485 Gene

No Data Available

Interacting Proteins for GC12P008485 Gene

Gene Ontology (GO) - Biological Process for GC12P008485 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12P008485 Gene

Drugs & Compounds for GC12P008485 Gene

No Compound Related Data Available

Transcripts for GC12P008485 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12P008485 Gene

No ASD Table

Relevant External Links for GC12P008485 Gene

GeneLoc Exon Structure for
GC12P008485

No data available for mRNA/cDNA for GC12P008485 Gene

Expression for GC12P008485 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12P008485 Gene

Orthologs for GC12P008485 Gene

No data available for Orthologs and Evolution for GC12P008485 Gene

Paralogs for GC12P008485 Gene

No data available for Paralogs for GC12P008485 Gene

Variants for GC12P008485 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC12P008485 Gene

Disorders for GC12P008485 Gene

No disorders were found for GC12P008485 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12P008485 Gene

Publications for GC12P008485 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C. (Nucleic Acids Res. 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H. … Engberg J. (J. Mol. Biol. 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J. … Blumenthal T. (Nucleic Acids Res. 1990) 1

Products for GC12P008485 Gene

Sources for GC12P008485 Gene

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