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Aliases for GC11P031819 Gene

Subcategory (RNA class) for GC11P031819 Gene

lncRNA

Quality Score for this RNA gene is

10.4

Aliases for GC11P031819 Gene

No Aliases found

ORGUL Members for GC11P031819 Gene

No data available for External Ids for GC11P031819 Gene

Summaries for GC11P031819 Gene

GeneCards Summary for GC11P031819 Gene

GC11P031819 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC11P031819 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC11P031819

Additional gene information for GC11P031819 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11P031819 Gene

Genomics for GC11P031819 Gene

Regulatory Elements for GC11P031819 Gene

Enhancers for GC11P031819 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H031819 1 FANTOM5 ENCODE dbSUPER 0.7 +0.9 875 0 SUZ12 EZH2 PAX6 GC11P031819 GC11P031824
GH11H031820 0.7 ENCODE dbSUPER 0.7 +1.4 1432 0 SUZ12 EZH2 GC11P031819 GC11P031824
GH11H031823 0.7 ENCODE dbSUPER 0.7 +4.8 4781 0 POU5F1 CTBP2 EZH2 GC11P031824 GC11P031819
GH11H031818 0.6 ENCODE dbSUPER 0.7 -0.3 -280 0 EZH2 PAX6 GC11P031819
GH11H031821 0.6 ENCODE dbSUPER 0.7 +0.6 562 0 EZH2 GC11P031819 GC11P031824
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC11P031819 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC11P031819 Gene

Chromosome:
11
Start:
31,819,147 bp from pter
End:
31,837,055 bp from pter
Size:
17,909 bases
Orientation:
Plus strand

Genomic View for GC11P031819 Gene

Genes around GC11P031819 on UCSC Golden Path with GeneCards custom track

GC11P031819 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11P031819 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11P031819 Gene

ORGUL Member Location for GC11P031819 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11P031819 Gene

Proteins for GC11P031819 Gene

Post-translational modifications for GC11P031819 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11P031819 Gene

Domains & Families for GC11P031819 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11P031819 Gene

Function for GC11P031819 Gene

Animal Model Products

miRNA for GC11P031819 Gene

miRTarBase miRNAs that target GC11P031819

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC11P031819 Gene

Localization for GC11P031819 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11P031819 Gene

Pathways & Interactions for GC11P031819 Gene

SuperPathways for GC11P031819 Gene

No Data Available

Interacting Proteins for GC11P031819 Gene

Gene Ontology (GO) - Biological Process for GC11P031819 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11P031819 Gene

Drugs & Compounds for GC11P031819 Gene

No Compound Related Data Available

Transcripts for GC11P031819 Gene

fRNAdb Secondary structures for GC11P031819 Gene

  • FR260455
  • FR160665
  • FR148435

Alternative Splicing Database (ASD) splice patterns (SP) for GC11P031819 Gene

No ASD Table

Relevant External Links for GC11P031819 Gene

GeneLoc Exon Structure for
GC11P031819

No data available for mRNA/cDNA for GC11P031819 Gene

Expression for GC11P031819 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11P031819 Gene

Orthologs for GC11P031819 Gene

No data available for Orthologs and Evolution for GC11P031819 Gene

Paralogs for GC11P031819 Gene

No data available for Paralogs for GC11P031819 Gene

Variants for GC11P031819 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC11P031819 Gene

Disorders for GC11P031819 Gene

No disorders were found for GC11P031819 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11P031819 Gene

Publications for GC11P031819 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC11P031819 Gene

Sources for GC11P031819 Gene

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