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Aliases for GC11M128994 Gene

Subcategory (RNA class) for GC11M128994 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC11M128994 Gene

No Aliases found

ORGUL Members for GC11M128994 Gene

No data available for External Ids for GC11M128994 Gene

Summaries for GC11M128994 Gene

GeneCards Summary for GC11M128994 Gene

GC11M128994 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC11M128994 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11M128994 Gene

Genomics for GC11M128994 Gene

Regulatory Elements for GC11M128994 Gene

Enhancers for GC11M128994 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G129023 1.1 Ensembl ENCODE 0.3 -30.7 -30732 1.7 ELF3 TAF1 JUN MAX CEBPG ZIC2 YY1 ZNF121 POLR2A HNF4G KCNJ5 ARHGAP32 GC11P129031 GC11M128994 RNU6-876P
GH11G129012 0.7 ENCODE 0.3 -20.6 -20601 2.0 CTCF MAX RAD21 GATA3 SCRT2 ZNF143 SMC3 FOS MAFK TCF7L2 ARHGAP32 GC11P129031 GC11M128994 RNU6-876P
GH11G129017 0.6 ENCODE 0.3 -25.0 -24972 1.1 CTCF GATA3 ZFHX2 SUZ12 CBX2 EGR2 ZKSCAN1 EZH2 ARHGAP32 GC11P129031 GC11M128994 RNU6-876P
GH11G129022 0.5 Ensembl 0.3 -29.2 -29161 0.2 GLIS2 GLIS1 NR2F6 GC11P129031 GC11M128994 RNU6-876P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC11M128994 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC11M128994 Gene

Chromosome:
11
Start:
128,993,236 bp from pter
End:
128,993,340 bp from pter
Size:
105 bases
Orientation:
Minus strand

Genomic View for GC11M128994 Gene

Genes around GC11M128994 on UCSC Golden Path with GeneCards custom track

GC11M128994 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11M128994 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC11M128994 Gene

Proteins for GC11M128994 Gene

Post-translational modifications for GC11M128994 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11M128994 Gene

Domains & Families for GC11M128994 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11M128994 Gene

Function for GC11M128994 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11M128994 Gene

Localization for GC11M128994 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC11M128994 Gene

Pathways & Interactions for GC11M128994 Gene

SuperPathways for GC11M128994 Gene

No Data Available

Interacting Proteins for GC11M128994 Gene

Gene Ontology (GO) - Biological Process for GC11M128994 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11M128994 Gene

Drugs & Compounds for GC11M128994 Gene

No Compound Related Data Available

Transcripts for GC11M128994 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC11M128994 Gene

No ASD Table

Relevant External Links for GC11M128994 Gene

GeneLoc Exon Structure for
GC11M128994

No data available for mRNA/cDNA for GC11M128994 Gene

Expression for GC11M128994 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11M128994 Gene

Orthologs for GC11M128994 Gene

No data available for Orthologs and Evolution for GC11M128994 Gene

Paralogs for GC11M128994 Gene

No data available for Paralogs for GC11M128994 Gene

Variants for GC11M128994 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC11M128994 Gene

Disorders for GC11M128994 Gene

No disorders were found for GC11M128994 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11M128994 Gene

Publications for GC11M128994 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C. (Nucleic Acids Res. 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H. … Engberg J. (J. Mol. Biol. 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J. … Blumenthal T. (Nucleic Acids Res. 1990) 1

Products for GC11M128994 Gene

Sources for GC11M128994 Gene

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