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Aliases for GC10P031099 Gene

Subcategory (RNA class) for GC10P031099 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC10P031099 Gene

No Aliases found

ORGUL Members for GC10P031099 Gene

No data available for External Ids for GC10P031099 Gene

Summaries for GC10P031099 Gene

GeneCards Summary for GC10P031099 Gene

GC10P031099 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC10P031099 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC10P031099

Additional gene information for GC10P031099 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P031099 Gene

Genomics for GC10P031099 Gene

Regulatory Elements for GC10P031099 Gene

Enhancers for GC10P031099 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H031100 1.3 Ensembl ENCODE dbSUPER 0.7 +1.4 1390 1 JUN BACH1 EBF1 BATF RAD21 RELA EED ZNF143 FOS ATF7 ENSG00000272381 ZNF438 GC10P031099 LOC105376482
GH10H031099 0.9 ENCODE dbSUPER 0.7 -0.2 -155 1 PKNOX1 ZNF687 JUN ZEB2 ATF2 ZNF592 FOSL1 HIC1 JUND ZNF366 ENSG00000272381 ZNF438 GC10P031099 GC10M031018
GH10H031083 1.3 Ensembl ENCODE dbSUPER 0.4 -16.1 -16080 0 HDGF CTCF RB1 SIN3A MAX RAD21 TEAD3 SMC3 ZNF143 SRF SVILP1 GC10P031099 GC10M031018
GH10H031090 1 ENCODE dbSUPER 0.4 -8.9 -8905 0 SMARCA5 PKNOX1 CBFB NR2F1 ELF1 DPF2 RELA CTBP1 EED IKZF1 ENSG00000272381 ZEB1 GC10P031099 GC10M031018
GH10H031069 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -26.7 -26736 8 ZNF23 JUND FOS MLLT1 ENSG00000272381 ENSG00000259994 DDX10P1 ZNF438 GC10M031018 GC10P031099
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P031099 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P031099 Gene

Chromosome:
10
Start:
31,099,980 bp from pter
End:
31,100,217 bp from pter
Size:
238 bases
Orientation:
Plus strand

Genomic View for GC10P031099 Gene

Genes around GC10P031099 on UCSC Golden Path with GeneCards custom track

GC10P031099 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P031099 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P031099 Gene

ORGUL Member Location for GC10P031099 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P031099 Gene

Proteins for GC10P031099 Gene

Post-translational modifications for GC10P031099 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P031099 Gene

Domains & Families for GC10P031099 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P031099 Gene

Function for GC10P031099 Gene

Phenotypes From GWAS Catalog for GC10P031099 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P031099 Gene

Localization for GC10P031099 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P031099 Gene

Pathways & Interactions for GC10P031099 Gene

SuperPathways for GC10P031099 Gene

No Data Available

Interacting Proteins for GC10P031099 Gene

Gene Ontology (GO) - Biological Process for GC10P031099 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P031099 Gene

Drugs & Compounds for GC10P031099 Gene

No Compound Related Data Available

Transcripts for GC10P031099 Gene

fRNAdb Secondary structures for GC10P031099 Gene

  • FR150665
  • FR054111

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P031099 Gene

No ASD Table

Relevant External Links for GC10P031099 Gene

GeneLoc Exon Structure for
GC10P031099

No data available for mRNA/cDNA for GC10P031099 Gene

Expression for GC10P031099 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P031099 Gene

Orthologs for GC10P031099 Gene

No data available for Orthologs and Evolution for GC10P031099 Gene

Paralogs for GC10P031099 Gene

No data available for Paralogs for GC10P031099 Gene

Variants for GC10P031099 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P031099 Gene

Disorders for GC10P031099 Gene

No disorders were found for GC10P031099 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P031099 Gene

Publications for GC10P031099 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC10P031099 Gene

Sources for GC10P031099 Gene

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