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Aliases for GC10P027538 Gene

Subcategory (RNA class) for GC10P027538 Gene

lncRNA

Quality Score for this RNA gene is

6

Aliases for GC10P027538 Gene

No Aliases found

ORGUL Members for GC10P027538 Gene

No data available for External Ids for GC10P027538 Gene

Summaries for GC10P027538 Gene

GeneCards Summary for GC10P027538 Gene

GC10P027538 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC10P027538 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC10P027538

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P027538 Gene

Genomics for GC10P027538 Gene

Regulatory Elements for GC10P027538 Gene

Enhancers for GC10P027538 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G027525 1.2 FANTOM5 Ensembl ENCODE 0.4 -11.8 -11787 0.6 ZNF766 STAT1 POLR2A SMARCA4 MNT MYC RAB18 ACBD5 MASTL GC10P027522 GC10P027538 GC10P027539
GH10G027527 1 Ensembl ENCODE 0.4 -9.2 -9229 3.1 HDAC1 ESRRA FOXA2 ARNT ETV1 CEBPG ZNF316 FOXK2 NFE2 MAFK GC10P027522 GC10P027538 GC10P027539
GH10G027540 0.5 ENCODE 0.7 +4.0 3956 3.0 FOXA2 FOS FOXA1 RAB18 FAM210CP GC10P027538 GC10P027539 LOC105376463
GH10G027535 0.4 ENCODE 0.7 -2.5 -2509 0.4 SMARCA4 MASTL GC10P027538 GC10P027539 GC10P027522
GH10G027558 0.8 ENCODE 0.3 +20.6 20644 0.2 CTCF TFAP4 ESRRA MAX ZIC2 RAD21 RARA GATA3 NCOR1 SMC3 LOC105376463 GC10P027539 GC10P027538
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P027538 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P027538 Gene

Chromosome:
10
Start:
27,538,063 bp from pter
End:
27,538,512 bp from pter
Size:
450 bases
Orientation:
Plus strand

Genomic View for GC10P027538 Gene

Genes around GC10P027538 on UCSC Golden Path with GeneCards custom track

GC10P027538 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P027538 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P027538 Gene

ORGUL Member Location for GC10P027538 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P027538 Gene

Proteins for GC10P027538 Gene

Post-translational modifications for GC10P027538 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P027538 Gene

Domains & Families for GC10P027538 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P027538 Gene

Function for GC10P027538 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P027538 Gene

Localization for GC10P027538 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10P027538 Gene

Pathways & Interactions for GC10P027538 Gene

SuperPathways for GC10P027538 Gene

No Data Available

Interacting Proteins for GC10P027538 Gene

Gene Ontology (GO) - Biological Process for GC10P027538 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P027538 Gene

Drugs & Compounds for GC10P027538 Gene

No Compound Related Data Available

Transcripts for GC10P027538 Gene

fRNAdb Secondary structures for GC10P027538 Gene

  • FR365755

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P027538 Gene

No ASD Table

Relevant External Links for GC10P027538 Gene

GeneLoc Exon Structure for
GC10P027538

No data available for mRNA/cDNA for GC10P027538 Gene

Expression for GC10P027538 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P027538 Gene

Orthologs for GC10P027538 Gene

No data available for Orthologs and Evolution for GC10P027538 Gene

Paralogs for GC10P027538 Gene

No data available for Paralogs for GC10P027538 Gene

Variants for GC10P027538 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P027538 Gene

Disorders for GC10P027538 Gene

No disorders were found for GC10P027538 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P027538 Gene

Publications for GC10P027538 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) . … Gojobori T. (Nucleic Acids Res. 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T. … Sugano S. (PLoS Biol. 2004) 1

Products for GC10P027538 Gene

Sources for GC10P027538 Gene

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