Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC10P021323 Gene

Subcategory (RNA class) for GC10P021323 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC10P021323 Gene

No Aliases found

ORGUL Members for GC10P021323 Gene

No data available for External Ids for GC10P021323 Gene

Summaries for GC10P021323 Gene

GeneCards Summary for GC10P021323 Gene

GC10P021323 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC10P021323 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC10P021323 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P021323 Gene

Genomics for GC10P021323 Gene

Regulatory Elements for GC10P021323 Gene

Enhancers for GC10P021323 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H021317 1.2 Ensembl ENCODE dbSUPER 0.7 -3.0 -3018 2 SCRT1 NFIA NFIB ZNF776 NFIC LCORL JUND ZNF544 BCL6B SCRT2 MLLT10 GC10P021323 LUZP4P1
GH10H021289 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -29.4 -29448 6 PKNOX1 SIN3A FEZF1 ZNF2 ATF7 SP3 TSHZ1 MAFF GLIS1 NBN RNU6-15P MLLT10 GC10P021323 LUZP4P1
GH10H021313 1.2 Ensembl ENCODE dbSUPER 0.4 -6.8 -6846 3 SP3 ZNF146 RNF2 CHD4 SIN3A RAD21 NR2F2 ZNF217 POLR2A FOS GC10P021323 LUZP4P1
GH10H021278 1.4 Ensembl ENCODE dbSUPER 0.3 -39.0 -39009 9 HDGF PKNOX1 RB1 ZNF133 ARID4B DNMT3B ZNF2 ZBTB40 RAD21 ETS1 RNU6-15P ENSG00000199222 CASC10 MIR1915 NEBL GC10P021323 LUZP4P1
GH10H021297 1.1 ENCODE dbSUPER 0.3 -24.2 -24228 0 ZSCAN4 ZNF76 GLI4 ZNF2 ZNF121 ZNF366 KLF7 ATF7 ZNF391 IKZF2 MLLT10 AMD1P1 RNU6-15P DNAJC1 GC10P021323 LUZP4P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P021323 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P021323 Gene

Chromosome:
10
Start:
21,321,960 bp from pter
End:
21,322,067 bp from pter
Size:
108 bases
Orientation:
Plus strand

Genomic View for GC10P021323 Gene

Genes around GC10P021323 on UCSC Golden Path with GeneCards custom track

GC10P021323 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P021323 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P021323 Gene

Proteins for GC10P021323 Gene

Post-translational modifications for GC10P021323 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P021323 Gene

Domains & Families for GC10P021323 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P021323 Gene

Function for GC10P021323 Gene

Phenotypes From GWAS Catalog for GC10P021323 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P021323 Gene

Localization for GC10P021323 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P021323 Gene

Pathways & Interactions for GC10P021323 Gene

SuperPathways for GC10P021323 Gene

No Data Available

Interacting Proteins for GC10P021323 Gene

Gene Ontology (GO) - Biological Process for GC10P021323 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P021323 Gene

Drugs & Compounds for GC10P021323 Gene

No Compound Related Data Available

Transcripts for GC10P021323 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P021323 Gene

No ASD Table

Relevant External Links for GC10P021323 Gene

GeneLoc Exon Structure for
GC10P021323

No data available for mRNA/cDNA for GC10P021323 Gene

Expression for GC10P021323 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P021323 Gene

Orthologs for GC10P021323 Gene

No data available for Orthologs and Evolution for GC10P021323 Gene

Paralogs for GC10P021323 Gene

No data available for Paralogs for GC10P021323 Gene

Variants for GC10P021323 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P021323 Gene

Disorders for GC10P021323 Gene

No disorders were found for GC10P021323 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P021323 Gene

Publications for GC10P021323 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC10P021323 Gene

Sources for GC10P021323 Gene

Content
Loading form....