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Aliases for GC10P017237 Gene

Subcategory (RNA class) for GC10P017237 Gene

UTR

Quality Score for this RNA gene is

2

Aliases for GC10P017237 Gene

No Aliases found

ORGUL Members for GC10P017237 Gene

No data available for External Ids for GC10P017237 Gene

Summaries for GC10P017237 Gene

GeneCards Summary for GC10P017237 Gene

GC10P017237 is an RNA Gene, and is affiliated with the UTR RNA class.

fRNAdb sequence ontologies for GC10P017237 Gene

  • three_prime_UTR: A region at the 3' end of a mature transcript (following the stop codon) that is not translated into a protein.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P017237 Gene

Genomics for GC10P017237 Gene

Regulatory Elements for GC10P017237 Gene

Enhancers for GC10P017237 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G017237 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +1.4 1381 1.9 PKNOX1 AGO1 SIN3A ZNF121 GATA3 POLR2A ADNP KDM5B FOS ZNF600 VIM-AS1 TRDMT1 VIM GC10P017237 ST8SIA6-AS1
GH10G017244 0.8 ENCODE 0.4 +7.7 7653 0.2 HDAC1 PKNOX1 TAL1 JUN FOSL1 CCNT2 TCF12 FOXM1 GATA3 NCOR1 GC10P017237 ST8SIA6-AS1
GH10G017257 1 Ensembl ENCODE 0.3 +20.4 20429 1.4 CTCF RAD21 ZNF316 ZNF366 ZNF143 SMC3 MAFK ZNF362 ZNF654 TRIM22 ENSG00000234961 VIM VIM-AS1 GC10P017237 ST8SIA6-AS1
GH10G017238 0.2 dbSUPER 0.7 +0.0 29 0.4 VIM-AS1 TRDMT1 GC10P017237 ST8SIA6-AS1
GH10G017347 1.4 FANTOM5 Ensembl ENCODE 0.1 +111.8 111752 2.3 HDAC1 NFIB ZSCAN4 RAD21 TCF12 SCRT2 FOS RCOR1 USF2 REST ST8SIA6-AS1 ST8SIA6 GC10P017237
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P017237 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P017237 Gene

Chromosome:
10
Start:
17,237,324 bp from pter
End:
17,237,389 bp from pter
Size:
66 bases
Orientation:
Plus strand

Genomic View for GC10P017237 Gene

Genes around GC10P017237 on UCSC Golden Path with GeneCards custom track

GC10P017237 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P017237 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P017237 Gene

Proteins for GC10P017237 Gene

Post-translational modifications for GC10P017237 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P017237 Gene

Domains & Families for GC10P017237 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P017237 Gene

Function for GC10P017237 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P017237 Gene

Localization for GC10P017237 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10P017237 Gene

Pathways & Interactions for GC10P017237 Gene

SuperPathways for GC10P017237 Gene

No Data Available

Interacting Proteins for GC10P017237 Gene

Gene Ontology (GO) - Biological Process for GC10P017237 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P017237 Gene

Drugs & Compounds for GC10P017237 Gene

No Compound Related Data Available

Transcripts for GC10P017237 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P017237 Gene

No ASD Table

Relevant External Links for GC10P017237 Gene

GeneLoc Exon Structure for
GC10P017237

No data available for mRNA/cDNA for GC10P017237 Gene

Expression for GC10P017237 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P017237 Gene

Orthologs for GC10P017237 Gene

No data available for Orthologs and Evolution for GC10P017237 Gene

Paralogs for GC10P017237 Gene

No data available for Paralogs for GC10P017237 Gene

Variants for GC10P017237 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P017237 Gene

Disorders for GC10P017237 Gene

No disorders were found for GC10P017237 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P017237 Gene

Publications for GC10P017237 Gene

  1. Perinuclear mRNA localisation by vimentin 3'-untranslated region requires a 100 nucleotide sequence and intermediate filaments. (PMID: 11377416) Bermano G. … Hesketh J.E. (FEBS Lett. 2001) 1
  2. RNA-protein interactions within the 3 ' untranslated region of vimentin mRNA. (PMID: 9241253) Zehner Z.E. … Holmes W.M. (Nucleic Acids Res. 1997) 1

Products for GC10P017237 Gene

Sources for GC10P017237 Gene

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