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Aliases for GC10P012490 Gene

Subcategory (RNA class) for GC10P012490 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for GC10P012490 Gene

No Aliases found

ORGUL Members for GC10P012490 Gene

No data available for External Ids for GC10P012490 Gene

Summaries for GC10P012490 Gene

GeneCards Summary for GC10P012490 Gene

GC10P012490 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC10P012490 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC10P012490

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P012490 Gene

Genomics for GC10P012490 Gene

Regulatory Elements for GC10P012490 Gene

Enhancers for GC10P012490 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G012483 1.3 FANTOM5 Ensembl ENCODE 0.4 -5.3 -5282 2.4 HDGF CTCF ETV1 MAX EBF1 RAD21 RELA ELK1 POLR2A ZNF143 CAMK1D RNU6ATAC39P ENSG00000228302 MIR548Q GC10P012490 GC10P012491
GH10G012500 1.3 FANTOM5 Ensembl ENCODE 0.4 +11.3 11295 1.2 CTCF KLF1 PKNOX1 FOXA2 ZNF2 ZNF766 ZNF302 ZBTB48 ZNF366 ZSCAN5C ENSG00000252438 CAMK1D MIR548Q SEC61A2 GC10P012490 GC10P012491 GC10P012540
GH10G012481 1 Ensembl ENCODE 0.4 -7.7 -7718 1.3 PKNOX1 MTA2 REST ZNF316 CBX5 ZSCAN5C IKZF1 ZNF512 POU5F1 ZNF600 CAMK1D ENSG00000228302 MIR548Q GC10P012490 GC10P012491 RNU6ATAC39P
GH10G012501 0.7 ENCODE 0.4 +10.5 10460 0.2 PKNOX1 NFIB ZNF664 ZNF766 ZNF366 ZSCAN5C SCRT2 ADNP NFE2 ZEB2 CAMK1D GC10P012490 GC10P012491 GC10P012540
GH10G012514 0.8 ENCODE 0.3 +23.9 23860 0.2 CTCF MXI1 ZBTB21 ZSCAN4 ZNF223 FEZF1 ZIC2 ZNF324 ZNF302 POLR2A GC10P012490 GC10P012491 GC10P012540
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P012490 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P012490 Gene

Chromosome:
10
Start:
12,490,257 bp from pter
End:
12,499,184 bp from pter
Size:
8,928 bases
Orientation:
Plus strand

Genomic View for GC10P012490 Gene

Genes around GC10P012490 on UCSC Golden Path with GeneCards custom track

GC10P012490 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P012490 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P012490 Gene

ORGUL Member Location for GC10P012490 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P012490 Gene

Proteins for GC10P012490 Gene

Post-translational modifications for GC10P012490 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P012490 Gene

Domains & Families for GC10P012490 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P012490 Gene

Function for GC10P012490 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P012490 Gene

Localization for GC10P012490 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10P012490 Gene

Pathways & Interactions for GC10P012490 Gene

SuperPathways for GC10P012490 Gene

No Data Available

Interacting Proteins for GC10P012490 Gene

Gene Ontology (GO) - Biological Process for GC10P012490 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P012490 Gene

Drugs & Compounds for GC10P012490 Gene

No Compound Related Data Available

Transcripts for GC10P012490 Gene

fRNAdb Secondary structures for GC10P012490 Gene

  • FR152766

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P012490 Gene

No ASD Table

Relevant External Links for GC10P012490 Gene

GeneLoc Exon Structure for
GC10P012490

No data available for mRNA/cDNA for GC10P012490 Gene

Expression for GC10P012490 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P012490 Gene

Orthologs for GC10P012490 Gene

No data available for Orthologs and Evolution for GC10P012490 Gene

Paralogs for GC10P012490 Gene

No data available for Paralogs for GC10P012490 Gene

Variants for GC10P012490 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P012490 Gene

Disorders for GC10P012490 Gene

No disorders were found for GC10P012490 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P012490 Gene

Publications for GC10P012490 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) . … Gojobori T. (Nucleic Acids Res. 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T. … Sugano S. (PLoS Biol. 2004) 1

Products for GC10P012490 Gene

Sources for GC10P012490 Gene

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