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Aliases for GC10P007984 Gene

Subcategory (RNA class) for GC10P007984 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC10P007984 Gene

No Aliases found

ORGUL Members for GC10P007984 Gene

No data available for External Ids for GC10P007984 Gene

Summaries for GC10P007984 Gene

GeneCards Summary for GC10P007984 Gene

GC10P007984 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC10P007984 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC10P007984

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P007984 Gene

Genomics for GC10P007984 Gene

Regulatory Elements for GC10P007984 Gene

Enhancers for GC10P007984 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G007956 1.4 FANTOM5 Ensembl ENCODE 0.3 -27.7 -27657 1.3 JUN BACH1 ZNF316 GATA3 ARID3A CBX5 FOSL2 FOS NFE2 TRIM24 GC10P007984 GC10M007907
GH10G008012 0.8 ENCODE 0.3 +28.7 28719 0.6 GTF2F1 SUZ12 SIN3A BCL11B ZNF2 ZNF335 ZNF121 POLR2A KLF8 EZH2 GATA3 ENSG00000232638 GATA3-AS1 PIR35933 GC10P007984
GH10G007946 0.8 ENCODE 0.3 -39.2 -39166 0.2 ZSCAN5A INSM2 ZNF2 ZNF324 HIC1 ZNF121 CTBP1 ZNF316 GATA3 ZBTB48 GC10M007907 GC10P007984
GH10G007942 0.8 ENCODE 0.3 -41.2 -41153 0.9 SOX13 FOXA2 SAP130 THRB TEAD3 ZNF316 GATA3 ZNF366 FOS NR2F6 GC10M007907 GC10P007984
GH10G007951 0.7 ENCODE 0.3 -32.7 -32723 1.0 PKNOX1 FOXA2 RFX1 HLF CEBPB FOXA1 ZNF316 GATA2 RFX3 CEBPA GC10P007984 GC10M007907
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P007984 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P007984 Gene

Chromosome:
10
Start:
7,984,438 bp from pter
End:
7,984,638 bp from pter
Size:
201 bases
Orientation:
Plus strand

Genomic View for GC10P007984 Gene

Genes around GC10P007984 on UCSC Golden Path with GeneCards custom track

GC10P007984 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P007984 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P007984 Gene

ORGUL Member Location for GC10P007984 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P007984 Gene

Proteins for GC10P007984 Gene

Post-translational modifications for GC10P007984 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P007984 Gene

Domains & Families for GC10P007984 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P007984 Gene

Function for GC10P007984 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P007984 Gene

Localization for GC10P007984 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10P007984 Gene

Pathways & Interactions for GC10P007984 Gene

SuperPathways for GC10P007984 Gene

No Data Available

Interacting Proteins for GC10P007984 Gene

Gene Ontology (GO) - Biological Process for GC10P007984 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P007984 Gene

Drugs & Compounds for GC10P007984 Gene

No Compound Related Data Available

Transcripts for GC10P007984 Gene

fRNAdb Secondary structures for GC10P007984 Gene

  • FR343281
  • FR286972
  • FR260590

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P007984 Gene

No ASD Table

Relevant External Links for GC10P007984 Gene

GeneLoc Exon Structure for
GC10P007984

No data available for mRNA/cDNA for GC10P007984 Gene

Expression for GC10P007984 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P007984 Gene

Orthologs for GC10P007984 Gene

No data available for Orthologs and Evolution for GC10P007984 Gene

Paralogs for GC10P007984 Gene

No data available for Paralogs for GC10P007984 Gene

Variants for GC10P007984 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P007984 Gene

Disorders for GC10P007984 Gene

No disorders were found for GC10P007984 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P007984 Gene

Publications for GC10P007984 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for GC10P007984 Gene

Sources for GC10P007984 Gene

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