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Aliases for GC10P006802 Gene

Subcategory (RNA class) for GC10P006802 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC10P006802 Gene

No Aliases found

ORGUL Members for GC10P006802 Gene

No data available for External Ids for GC10P006802 Gene

Summaries for GC10P006802 Gene

GeneCards Summary for GC10P006802 Gene

GC10P006802 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC10P006802 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC10P006802

Additional gene information for GC10P006802 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P006802 Gene

Genomics for GC10P006802 Gene

Regulatory Elements for GC10P006802 Gene

Enhancers for GC10P006802 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H006794 1 FANTOM5 Ensembl ENCODE 0.4 -6.7 -6653 2 PKNOX1 RNF2 POLR2A LINC00707 GC10P006802
GH10H006785 0.9 Ensembl ENCODE 0.4 -15.9 -15867 1 CTCF SUZ12 ZNF473 NRF1 ZSCAN4 RAD21 MTA3 NONO EGR1 HES1 FBXO18 LOC105376384 GDI2 LINC00707 GC10P006802
GH10H006777 1.1 Ensembl ENCODE 0.3 -22.3 -22311 4 ZBTB21 JUN KLF17 SIN3A BRCA1 RFX5 ZFHX2 CTBP1 POLR2A ZNF366 LINC00707 GC10P006802
GH10H006787 0.4 ENCODE 0.4 -14.6 -14574 0 ZMYM3 LINC00707 GC10P006802
GH10H006802 0.2 ENCODE 0.7 +0.9 858 0 GC10P006802 GC10M006825
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P006802 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P006802 Gene

Chromosome:
10
Start:
6,802,395 bp from pter
End:
6,802,425 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for GC10P006802 Gene

Genes around GC10P006802 on UCSC Golden Path with GeneCards custom track

GC10P006802 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P006802 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P006802 Gene

ORGUL Member Location for GC10P006802 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P006802 Gene

Proteins for GC10P006802 Gene

Post-translational modifications for GC10P006802 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P006802 Gene

Domains & Families for GC10P006802 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P006802 Gene

Function for GC10P006802 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P006802 Gene

Localization for GC10P006802 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P006802 Gene

Pathways & Interactions for GC10P006802 Gene

SuperPathways for GC10P006802 Gene

No Data Available

Interacting Proteins for GC10P006802 Gene

Gene Ontology (GO) - Biological Process for GC10P006802 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P006802 Gene

Drugs & Compounds for GC10P006802 Gene

No Compound Related Data Available

Transcripts for GC10P006802 Gene

fRNAdb Secondary structures for GC10P006802 Gene

  • FR006645
  • FR279894

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P006802 Gene

No ASD Table

Relevant External Links for GC10P006802 Gene

GeneLoc Exon Structure for
GC10P006802

No data available for mRNA/cDNA for GC10P006802 Gene

Expression for GC10P006802 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P006802 Gene

Orthologs for GC10P006802 Gene

No data available for Orthologs and Evolution for GC10P006802 Gene

Paralogs for GC10P006802 Gene

No data available for Paralogs for GC10P006802 Gene

Variants for GC10P006802 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P006802 Gene

Disorders for GC10P006802 Gene

No disorders were found for GC10P006802 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P006802 Gene

Publications for GC10P006802 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC10P006802 Gene

Sources for GC10P006802 Gene

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