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Aliases for GC10P004937 Gene

Subcategory (RNA class) for GC10P004937 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC10P004937 Gene

No Aliases found

ORGUL Members for GC10P004937 Gene

No data available for External Ids for GC10P004937 Gene

Summaries for GC10P004937 Gene

GeneCards Summary for GC10P004937 Gene

GC10P004937 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC10P004937 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC10P004937

Additional gene information for GC10P004937 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P004937 Gene

Genomics for GC10P004937 Gene

GeneHancer (GH) Regulatory Elements for GC10P004937 Gene

Promoters and enhancers for GC10P004937 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I004939 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.8 +4.7 4653 5 PKNOX1 ATF1 ARNT YY1 TCF12 ZNF766 ATF7 RXRA CAVIN1 NCOA1 AKR1C2 AKR1C1 GC10P004937 ENSG00000238840 GC10M004934
GH10I004944 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.7 9747 4.7 FOXA2 SIN3A DMAP1 BRCA1 ETS1 YY1 ZNF766 ATF7 FOS RXRA AKR1C1 LOC101928051 AKR1C3 GC10P004937 ENSG00000238840 GC10M004934
GH10I004931 Enhancer 0.6 ENCODE 0.4 -5.5 -5478 0.5 ZSCAN4 MAX REST RAD21 YY1 JUND PHF20 ATF3 GLIS1 IKZF1 AKR1C1 GC10P004937 AKR1C6P
GH10I004956 Enhancer 0.7 dbSUPER 0.3 +20.7 20730 3.2 SOX13 PKNOX1 FOXA2 SAP130 ZNF316 FOS NFE2 HOMEZ GATAD2A SOX5 AKR1C2 AKR1C1 LOC101928051 ENSG00000238840 GC10P004937 GC10M004934
GH10I004924 Enhancer 0.5 FANTOM5 0.4 -12.3 -12330 0.1 ZSCAN4 KDM1A PAX8 ZBTB1 AKR1C2 AKR1C1 UCN3 AKR1C6P GC10P004937
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC10P004937 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10P004937 Gene

Genomic Locations for GC10P004937 Gene
chr10:4,937,228-4,937,265
(GRCh38/hg38)
Size:
38 bases
Orientation:
Plus strand

Genomic View for GC10P004937 Gene

Genes around GC10P004937 on UCSC Golden Path with GeneCards custom track

GC10P004937 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P004937 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P004937 Gene

ORGUL Member Location for GC10P004937 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P004937 Gene

Proteins for GC10P004937 Gene

Post-translational modifications for GC10P004937 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P004937 Gene

Domains & Families for GC10P004937 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P004937 Gene

Function for GC10P004937 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P004937 Gene

Localization for GC10P004937 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P004937 Gene

Pathways & Interactions for GC10P004937 Gene

SuperPathways for GC10P004937 Gene

No Data Available

Interacting Proteins for GC10P004937 Gene

Gene Ontology (GO) - Biological Process for GC10P004937 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P004937 Gene

Drugs & Compounds for GC10P004937 Gene

No Compound Related Data Available

Transcripts for GC10P004937 Gene

fRNAdb Secondary structures for GC10P004937 Gene

  • FR040209
  • FR329236

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P004937 Gene

No ASD Table

Relevant External Links for GC10P004937 Gene

GeneLoc Exon Structure for
GC10P004937

No data available for mRNA/cDNA for GC10P004937 Gene

Expression for GC10P004937 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P004937 Gene

Orthologs for GC10P004937 Gene

No data available for Orthologs and Evolution for GC10P004937 Gene

Paralogs for GC10P004937 Gene

No data available for Paralogs for GC10P004937 Gene

Variants for GC10P004937 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10P004937 Gene

Disorders for GC10P004937 Gene

No disorders were found for GC10P004937 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P004937 Gene

Publications for GC10P004937 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC10P004937 Gene

Sources for GC10P004937 Gene

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