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Aliases for GC10P004844 Gene

Subcategory (RNA class) for GC10P004844 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC10P004844 Gene

No Aliases found

No data available for External Ids for GC10P004844 Gene

Summaries for GC10P004844 Gene

GeneCards Summary for GC10P004844 Gene

GC10P004844 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC10P004844 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC10P004844

Additional gene information for GC10P004844 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P004844 Gene

Genomics for GC10P004844 Gene

Regulatory Elements for GC10P004844 Gene

Enhancers for GC10P004844 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H004847 1.6 FANTOM5 Ensembl ENCODE 0.7 +4.4 4393 3 HDGF FOXA2 MLX ARNT ARID4B SIN3A ZNF2 YY1 ZNF766 CBX5 AKR1E2 UCN3 AKR1C2 GC10P004844 PIR32364
GH10H004825 1 ENCODE 0.4 -18.1 -18141 2 PKNOX1 ATF1 SIN3A ZNF766 ELK1 FOS CAVIN1 NCOA1 REST ZNF592 UCN3 TUBAL3 AKR1C2 AKR1E2 GC10P004844
GH10H004811 1.3 FANTOM5 Ensembl ENCODE 0.3 -31.9 -31889 2 ZSCAN4 JUN TSC22D4 FOSL1 ZNF23 CTBP1 POLR2A FOSL2 FOS NFE2 AKR1C2 LOC101928051 AKR1E2 AKR1C1 GC10P004844
GH10H004814 1.2 Ensembl ENCODE 0.3 -29.5 -29492 2 YBX3 HDGF ARNT SIN3A GLI4 ZBTB40 ZNF2 RAD21 ZNF766 POLR3A LOC101928051 AKR1C1 AKR1E2 GC10P004844
GH10H004852 0.7 ENCODE 0.4 +7.2 7183 1 FOXA2 TAF1 MAX REST RAD21 FOXA1 NR2F2 YY1 JUND ATF3 UCN3 AKR1E2 PIR32364 GC10P004844
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P004844 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P004844 Gene

Chromosome:
10
Start:
4,844,713 bp from pter
End:
4,844,745 bp from pter
Size:
33 bases
Orientation:
Plus strand

Genomic View for GC10P004844 Gene

Genes around GC10P004844 on UCSC Golden Path with GeneCards custom track

GC10P004844 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P004844 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P004844 Gene

ORGUL Member Location for GC10P004844 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P004844 Gene

Proteins for GC10P004844 Gene

Post-translational modifications for GC10P004844 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P004844 Gene

Domains & Families for GC10P004844 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P004844 Gene

Function for GC10P004844 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P004844 Gene

Localization for GC10P004844 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P004844 Gene

Pathways & Interactions for GC10P004844 Gene

SuperPathways for GC10P004844 Gene

No Data Available

Interacting Proteins for GC10P004844 Gene

Gene Ontology (GO) - Biological Process for GC10P004844 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P004844 Gene

Drugs & Compounds for GC10P004844 Gene

No Compound Related Data Available

Transcripts for GC10P004844 Gene

fRNAdb Secondary structures for GC10P004844 Gene

  • FR036964
  • FR329236
  • FR264324

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P004844 Gene

No ASD Table

Relevant External Links for GC10P004844 Gene

GeneLoc Exon Structure for
GC10P004844

No data available for mRNA/cDNA for GC10P004844 Gene

Expression for GC10P004844 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P004844 Gene

Orthologs for GC10P004844 Gene

No data available for Orthologs and Evolution for GC10P004844 Gene

Paralogs for GC10P004844 Gene

No data available for Paralogs for GC10P004844 Gene

Variants for GC10P004844 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P004844 Gene

Disorders for GC10P004844 Gene

No disorders were found for GC10P004844 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P004844 Gene

Publications for GC10P004844 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC10P004844 Gene

Sources for GC10P004844 Gene

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