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Aliases for GC10P003812 Gene

Subcategory (RNA class) for GC10P003812 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC10P003812 Gene

No Aliases found

ORGUL Members for GC10P003812 Gene

No data available for External Ids for GC10P003812 Gene

Summaries for GC10P003812 Gene

GeneCards Summary for GC10P003812 Gene

GC10P003812 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC10P003812 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC10P003812

Additional gene information for GC10P003812 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P003812 Gene

Genomics for GC10P003812 Gene

Regulatory Elements for GC10P003812 Gene

Enhancers for GC10P003812 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H003802 2.6 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.9 -2931 11 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A YBX1 DMAP1 YY1 PITRM1-AS1 KLF6 GC10P003812 LOC105376364
GH10H003813 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.3 3348 0 ZNF555 FOXA2 PRDM12 ZC3H11A KDM1A ZNF781 ZNF518A ZNF697 KLF6 ENSG00000273001 PITRM1-AS1 GC10P003812 GC10P003822
GH10H003814 0.5 ENCODE dbSUPER 0.7 +4.2 4180 0 KLF6 GC10P003812 GC10P003822
GH10H003820 0.2 ENCODE 0.4 +9.9 9851 0 KLF6 GC10P003822 GC10P003812
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10P003812 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10P003812 Gene

Chromosome:
10
Start:
3,810,874 bp from pter
End:
3,810,994 bp from pter
Size:
121 bases
Orientation:
Plus strand

Genomic View for GC10P003812 Gene

Genes around GC10P003812 on UCSC Golden Path with GeneCards custom track

GC10P003812 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P003812 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P003812 Gene

ORGUL Member Location for GC10P003812 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P003812 Gene

Proteins for GC10P003812 Gene

Post-translational modifications for GC10P003812 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P003812 Gene

Domains & Families for GC10P003812 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P003812 Gene

Function for GC10P003812 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P003812 Gene

Localization for GC10P003812 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P003812 Gene

Pathways & Interactions for GC10P003812 Gene

SuperPathways for GC10P003812 Gene

No Data Available

Interacting Proteins for GC10P003812 Gene

Gene Ontology (GO) - Biological Process for GC10P003812 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P003812 Gene

Drugs & Compounds for GC10P003812 Gene

No Compound Related Data Available

Transcripts for GC10P003812 Gene

fRNAdb Secondary structures for GC10P003812 Gene

  • FR130894

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P003812 Gene

No ASD Table

Relevant External Links for GC10P003812 Gene

GeneLoc Exon Structure for
GC10P003812

No data available for mRNA/cDNA for GC10P003812 Gene

Expression for GC10P003812 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P003812 Gene

Orthologs for GC10P003812 Gene

No data available for Orthologs and Evolution for GC10P003812 Gene

Paralogs for GC10P003812 Gene

No data available for Paralogs for GC10P003812 Gene

Variants for GC10P003812 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10P003812 Gene

Disorders for GC10P003812 Gene

No disorders were found for GC10P003812 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P003812 Gene

Publications for GC10P003812 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC10P003812 Gene

Sources for GC10P003812 Gene

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