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Aliases for GC10M126780 Gene

Subcategory (RNA class) for GC10M126780 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for GC10M126780 Gene

No Aliases found

ORGUL Members for GC10M126780 Gene

No data available for External Ids for GC10M126780 Gene

Summaries for GC10M126780 Gene

GeneCards Summary for GC10M126780 Gene

GC10M126780 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC10M126780 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M126780 Gene

Genomics for GC10M126780 Gene

Regulatory Elements for GC10M126780 Gene

Enhancers for GC10M126780 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G126749 0.7 ENCODE 0.3 +30.5 30548 0.2 CTCF ZNF654 NRF1 REST ZNF501 ZNF2 RAD21 MAFF ZNF143 SMC3 ENSG00000199321 GC10M126780 C10orf90
GH10G126786 0.4 ENCODE 0.4 -7.7 -7714 1.3 MNT DOCK1 C10orf90 ENSG00000199321 GC10M126780 LOC105378550
GH10G126754 0.4 ENCODE 0.3 +24.2 24236 1.5 GATA3 UROS GC10M126780 ENSG00000199321 C10orf90
GH10G126840 0.6 ENCODE 0.2 -61.4 -61424 1.7 CTCF ZNF654 CEBPB CEBPG RAD21 POLR2A SMC3 FOS ENSG00000199321 LOC105378550 GC10M126780
GH10G126730 0.4 ENCODE 0.2 +47.9 47863 2.5 CTCF MNT GC10M126780 ENSG00000199321 C10orf90
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M126780 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M126780 Gene

Chromosome:
10
Start:
126,779,701 bp from pter
End:
126,779,774 bp from pter
Size:
74 bases
Orientation:
Minus strand

Genomic View for GC10M126780 Gene

Genes around GC10M126780 on UCSC Golden Path with GeneCards custom track

GC10M126780 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M126780 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M126780 Gene

Proteins for GC10M126780 Gene

Post-translational modifications for GC10M126780 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M126780 Gene

Domains & Families for GC10M126780 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M126780 Gene

Function for GC10M126780 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M126780 Gene

Localization for GC10M126780 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10M126780 Gene

Pathways & Interactions for GC10M126780 Gene

SuperPathways for GC10M126780 Gene

No Data Available

Interacting Proteins for GC10M126780 Gene

Gene Ontology (GO) - Biological Process for GC10M126780 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M126780 Gene

Drugs & Compounds for GC10M126780 Gene

No Compound Related Data Available

Transcripts for GC10M126780 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M126780 Gene

No ASD Table

Relevant External Links for GC10M126780 Gene

GeneLoc Exon Structure for
GC10M126780

No data available for mRNA/cDNA for GC10M126780 Gene

Expression for GC10M126780 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M126780 Gene

Orthologs for GC10M126780 Gene

No data available for Orthologs and Evolution for GC10M126780 Gene

Paralogs for GC10M126780 Gene

No data available for Paralogs for GC10M126780 Gene

Variants for GC10M126780 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M126780 Gene

Disorders for GC10M126780 Gene

No disorders were found for GC10M126780 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M126780 Gene

Publications for GC10M126780 Gene

  1. Purified box C/D snoRNPs are able to reproduce site-specific 2'-O-methylation of target RNA in vitro. (PMID: 12215523) Galardi S. … Bozzoni I. (Mol. Cell. Biol. 2002) 1
  2. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-LA!szlA^ Z. … Kiss T. (Cell 1996) 1

Products for GC10M126780 Gene

Sources for GC10M126780 Gene

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