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Aliases for GC10M093511 Gene

Subcategory (RNA class) for GC10M093511 Gene


Quality Score for this RNA gene is


Aliases for GC10M093511 Gene

No Aliases found

ORGUL Members for GC10M093511 Gene

No data available for External Ids for GC10M093511 Gene

Summaries for GC10M093511 Gene

GeneCards Summary for GC10M093511 Gene

GC10M093511 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC10M093511 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M093511 Gene

Genomics for GC10M093511 Gene

Regulatory Elements for GC10M093511 Gene

Enhancers for GC10M093511 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G093514 1.1 Ensembl ENCODE dbSUPER 0.4 -5.0 -5022 2.2 KLF1 BHLHE40 REST ZIC2 ATF2 NR2F2 ZNF664 TCF12 PRDM6 ZNF652 CEP55 FFAR4 CYP26A1 RNA5SP323 GC10M093511 GC10M093549
GH10G093511 0.6 ENCODE 0.7 -0.8 -809 0.1 CTCF ZNF654 TRIM22 SMC3 CUX1 RAD21 GC10M093511 RNA5SP323 GC10M093549
GH10G093502 1 ENCODE dbSUPER 0.4 +7.6 7627 1.1 ELF3 FOXA2 SAP130 ZMYM3 TEAD3 RARA ZNF121 NR2F6 MAFK GATAD2A MYOF RNA5SP323 GC10M093511 CEP55
GH10G093548 1.2 Ensembl ENCODE 0.3 -38.1 -38089 0.9 FOXA2 PKNOX1 SIN3A FEZF1 GLIS2 GATA2 FOS ZNF263 ZHX2 JUNB GC10M093549 GC10M093511 RNA5SP323
GH10G093541 1.1 Ensembl ENCODE 0.3 -31.9 -31896 1.2 PKNOX1 NFIB KLF17 ZNF195 ZNF2 RAD21 ZNF121 GLIS2 ZNF366 ZNF143 RPL17P34 RBP4 GC10M093549 GC10M093511 RNA5SP323
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M093511 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M093511 Gene

93,510,567 bp from pter
93,510,680 bp from pter
114 bases
Minus strand

Genomic View for GC10M093511 Gene

Genes around GC10M093511 on UCSC Golden Path with GeneCards custom track

GC10M093511 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M093511 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M093511 Gene

Proteins for GC10M093511 Gene

Post-translational modifications for GC10M093511 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M093511 Gene

Domains & Families for GC10M093511 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M093511 Gene

Function for GC10M093511 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M093511 Gene

Localization for GC10M093511 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10M093511 Gene

Pathways & Interactions for GC10M093511 Gene

SuperPathways for GC10M093511 Gene

No Data Available

Interacting Proteins for GC10M093511 Gene

Gene Ontology (GO) - Biological Process for GC10M093511 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC10M093511 Gene

Drugs & Compounds for GC10M093511 Gene

No Compound Related Data Available

Transcripts for GC10M093511 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M093511 Gene

No ASD Table

Relevant External Links for GC10M093511 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC10M093511 Gene

Expression for GC10M093511 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M093511 Gene

Orthologs for GC10M093511 Gene

No data available for Orthologs and Evolution for GC10M093511 Gene

Paralogs for GC10M093511 Gene

No data available for Paralogs for GC10M093511 Gene

Variants for GC10M093511 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M093511 Gene

Disorders for GC10M093511 Gene

No disorders were found for GC10M093511 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M093511 Gene

Publications for GC10M093511 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M. … Barciszewski J. (Nucleic Acids Res. 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov M.M. … Noller H.F. (Science 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles M.A. … Klug A. (J. Mol. Biol. 2000) 1

Products for GC10M093511 Gene

Sources for GC10M093511 Gene

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