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Aliases for GC10M089598 Gene

Subcategory (RNA class) for GC10M089598 Gene

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Quality Score for this RNA gene is

5.2

Aliases for GC10M089598 Gene

No Aliases found

ORGUL Members for GC10M089598 Gene

No data available for External Ids for GC10M089598 Gene

Summaries for GC10M089598 Gene

GeneCards Summary for GC10M089598 Gene

GC10M089598 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC10M089598 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC10M089598

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M089598 Gene

Genomics for GC10M089598 Gene

Regulatory Elements for GC10M089598 Gene

Enhancers for GC10M089598 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G089609 0.7 ENCODE 0.4 -17.3 -17250 1.1 CTCF LEF1 RAD21 SMC3 NFE2 RELB IKZF2 ZNF654 NR2F1 TRIM22 ENSG00000240996 KIF20B GC10M089598 ENSG00000249962
GH10G089641 1.4 Ensembl ENCODE 0.2 -51.9 -51894 5.7 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF263 SP3 NFYC ZNF610 ENSG00000235100 LINC00865 ENSG00000240996 ENSG00000232110 KIF20B PANK1 ENSG00000249962 GC10M089598
GH10G089632 0.8 ENCODE 0.3 -40.6 -40594 1.5 JUN MAX CEBPG RAD21 RFX5 ZNF664 FOS MIXL1 GATAD2A GFI1B ENSG00000235100 ENSG00000240996 ENSG00000249962 GC10M089598
GH10G089620 0.5 ENCODE 0.3 -27.7 -27711 0.2 ZNF121 PKNOX1 TEAD4 ZBTB33 TRIM28 ENSG00000249962 GC10M089598
GH10G089637 0.4 ENCODE 0.3 -44.5 -44511 0.2 CEBPA HLF MIR107 KIF20B ENSG00000235100 SLC16A12-AS1 ENSG00000249962 GC10M089598
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M089598 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M089598 Gene

Chromosome:
10
Start:
89,592,744 bp from pter
End:
89,592,828 bp from pter
Size:
85 bases
Orientation:
Minus strand

Genomic View for GC10M089598 Gene

Genes around GC10M089598 on UCSC Golden Path with GeneCards custom track

GC10M089598 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M089598 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10M089598 Gene

ORGUL Member Location for GC10M089598 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M089598 Gene

Proteins for GC10M089598 Gene

Post-translational modifications for GC10M089598 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M089598 Gene

Domains & Families for GC10M089598 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M089598 Gene

Function for GC10M089598 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M089598 Gene

Localization for GC10M089598 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10M089598 Gene

Pathways & Interactions for GC10M089598 Gene

SuperPathways for GC10M089598 Gene

No Data Available

Interacting Proteins for GC10M089598 Gene

Gene Ontology (GO) - Biological Process for GC10M089598 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M089598 Gene

Drugs & Compounds for GC10M089598 Gene

No Compound Related Data Available

Transcripts for GC10M089598 Gene

fRNAdb Secondary structures for GC10M089598 Gene

  • FR001277

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M089598 Gene

No ASD Table

Relevant External Links for GC10M089598 Gene

GeneLoc Exon Structure for
GC10M089598

No data available for mRNA/cDNA for GC10M089598 Gene

Expression for GC10M089598 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M089598 Gene

Orthologs for GC10M089598 Gene

No data available for Orthologs and Evolution for GC10M089598 Gene

Paralogs for GC10M089598 Gene

No data available for Paralogs for GC10M089598 Gene

Variants for GC10M089598 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M089598 Gene

Disorders for GC10M089598 Gene

No disorders were found for GC10M089598 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M089598 Gene

Publications for GC10M089598 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC10M089598 Gene

Sources for GC10M089598 Gene

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