Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC10M073941 Gene

Subcategory (RNA class) for GC10M073941 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for GC10M073941 Gene

No Aliases found

ORGUL Members for GC10M073941 Gene

No data available for External Ids for GC10M073941 Gene

Summaries for GC10M073941 Gene

GeneCards Summary for GC10M073941 Gene

GC10M073941 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC10M073941 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC10M073941

Additional gene information for GC10M073941 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M073941 Gene

Genomics for GC10M073941 Gene

Regulatory Elements for GC10M073941 Gene

Enhancers for GC10M073941 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H073940 1.5 Ensembl ENCODE dbSUPER 0.7 +0.5 525 1 HDGF ATF1 ARNT ZFP64 ARID4B TCF12 CBX5 ZNF143 KLF7 ATF7 GC10M073941 GC10P073930
GH10H073936 1.1 Ensembl ENCODE dbSUPER 0.7 +3.9 3874 1 ZNF121 STAT1 PRDM10 FOXP2 ZFX ZBTB20 GC10M073941 GC10P073930
GH10H073964 2.4 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.3 -25.4 -25399 6 PKNOX1 SIN3A FEZF1 ZNF2 ETS1 GTF3C2 GLIS2 ATF7 FOS SP3 SEC24C GLUD1P3 ENSG00000272140 DUSP8P5 BMS1P4 AP3M1 ENSG00000242288 ECD ZSWIM8 RPL17P50
GH10H073955 1.6 FANTOM5 Ensembl ENCODE 0.4 -16.5 -16479 4 PKNOX1 ARNT YBX1 ZNF766 ZNF143 JUNB REST ZNF592 MEF2D SMARCA4 VCL PLAU C10orf55 NDST2 ADK ANXA7 CFAP70 FUT11 GC10M073941
GH10H073931 1.4 Ensembl ENCODE dbSUPER 0.4 +9.2 9214 1 HDAC1 HDGF NFRKB BATF RCOR1 FOS ATF7 ETV6 RUNX3 IKZF2 MYOZ1 GC10P073930 GC10M073941
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M073941 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M073941 Gene

Chromosome:
10
Start:
73,941,771 bp from pter
End:
73,941,801 bp from pter
Size:
31 bases
Orientation:
Minus strand

Genomic View for GC10M073941 Gene

Genes around GC10M073941 on UCSC Golden Path with GeneCards custom track

GC10M073941 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M073941 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10M073941 Gene

ORGUL Member Location for GC10M073941 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M073941 Gene

Proteins for GC10M073941 Gene

Post-translational modifications for GC10M073941 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M073941 Gene

Domains & Families for GC10M073941 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M073941 Gene

Function for GC10M073941 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M073941 Gene

Localization for GC10M073941 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M073941 Gene

Pathways & Interactions for GC10M073941 Gene

SuperPathways for GC10M073941 Gene

No Data Available

Interacting Proteins for GC10M073941 Gene

Gene Ontology (GO) - Biological Process for GC10M073941 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M073941 Gene

Drugs & Compounds for GC10M073941 Gene

No Compound Related Data Available

Transcripts for GC10M073941 Gene

fRNAdb Secondary structures for GC10M073941 Gene

  • FR287974

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M073941 Gene

No ASD Table

Relevant External Links for GC10M073941 Gene

GeneLoc Exon Structure for
GC10M073941

No data available for mRNA/cDNA for GC10M073941 Gene

Expression for GC10M073941 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M073941 Gene

Orthologs for GC10M073941 Gene

No data available for Orthologs and Evolution for GC10M073941 Gene

Paralogs for GC10M073941 Gene

No data available for Paralogs for GC10M073941 Gene

Variants for GC10M073941 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M073941 Gene

Disorders for GC10M073941 Gene

No disorders were found for GC10M073941 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M073941 Gene

Publications for GC10M073941 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC10M073941 Gene

Sources for GC10M073941 Gene

Content
Loading form....