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Aliases for GC10M059343 Gene

Subcategory (RNA class) for GC10M059343 Gene

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Quality Score for this RNA gene is

0.2

Aliases for GC10M059343 Gene

No Aliases found

ORGUL Members for GC10M059343 Gene

No data available for External Ids for GC10M059343 Gene

Summaries for GC10M059343 Gene

GeneCards Summary for GC10M059343 Gene

GC10M059343 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC10M059343 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC10M059343

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M059343 Gene

Genomics for GC10M059343 Gene

Regulatory Elements for GC10M059343 Gene

Enhancers for GC10M059343 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G059360 1.4 Ensembl ENCODE dbSUPER 0.4 -18.8 -18766 3.5 PKNOX1 ZSCAN4 SIN3A KLF17 ZNF2 RAD21 GLIS2 FOS KLF7 ZNF362 FAM13C GC10M059343
GH10G059322 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +20.1 20099 2.2 FOXA2 ARID4B RAD21 RARA YY1 MIXL1 MIER2 PPARG NR2F2 HNF4A FAM13C ENSG00000236556 LOC102724778 GC10M059343
GH10G059346 0.7 ENCODE dbSUPER 0.7 -3.1 -3137 0.2 POLR2A SMARCA4 GC10M059343 FAM13C
GH10G059336 1.2 Ensembl ENCODE dbSUPER 0.4 +6.0 6039 2.3 ZNF133 MAX FEZF1 ZBTB40 RAD21 ZNF7 TEAD3 ZNF664 PRDM10 NFE2 FAM13C GC10M059343 LOC102724778
GH10G059341 0.4 dbSUPER 0.7 +2.2 2187 0.7 SMARCA4 FAM13C GC10M059343 LOC102724778
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M059343 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M059343 Gene

Chromosome:
10
Start:
59,343,322 bp from pter
End:
59,343,339 bp from pter
Size:
18 bases
Orientation:
Minus strand

Genomic View for GC10M059343 Gene

Genes around GC10M059343 on UCSC Golden Path with GeneCards custom track

GC10M059343 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M059343 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10M059343 Gene

ORGUL Member Location for GC10M059343 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M059343 Gene

Proteins for GC10M059343 Gene

Post-translational modifications for GC10M059343 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M059343 Gene

Domains & Families for GC10M059343 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M059343 Gene

Function for GC10M059343 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M059343 Gene

Localization for GC10M059343 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10M059343 Gene

Pathways & Interactions for GC10M059343 Gene

SuperPathways for GC10M059343 Gene

No Data Available

Interacting Proteins for GC10M059343 Gene

Gene Ontology (GO) - Biological Process for GC10M059343 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M059343 Gene

Drugs & Compounds for GC10M059343 Gene

No Compound Related Data Available

Transcripts for GC10M059343 Gene

fRNAdb Secondary structures for GC10M059343 Gene

  • FR169701

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M059343 Gene

No ASD Table

Relevant External Links for GC10M059343 Gene

GeneLoc Exon Structure for
GC10M059343

No data available for mRNA/cDNA for GC10M059343 Gene

Expression for GC10M059343 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M059343 Gene

Orthologs for GC10M059343 Gene

No data available for Orthologs and Evolution for GC10M059343 Gene

Paralogs for GC10M059343 Gene

No data available for Paralogs for GC10M059343 Gene

Variants for GC10M059343 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M059343 Gene

Disorders for GC10M059343 Gene

No disorders were found for GC10M059343 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M059343 Gene

Publications for GC10M059343 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC10M059343 Gene

Sources for GC10M059343 Gene

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