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Aliases for GC10M058597 Gene

Subcategory (RNA class) for GC10M058597 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC10M058597 Gene

No Aliases found

ORGUL Members for GC10M058597 Gene

No data available for External Ids for GC10M058597 Gene

Summaries for GC10M058597 Gene

GeneCards Summary for GC10M058597 Gene

GC10M058597 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC10M058597 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M058597 Gene

Genomics for GC10M058597 Gene

Regulatory Elements for GC10M058597 Gene

Enhancers for GC10M058597 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G058592 0.8 Ensembl ENCODE 0.7 +4.4 4421 0.6 CREB3 ZNF512 IRF1 TBX21 ZBTB40 ZNF592 BICC1 GC10M058597 GC10P058574
GH10G058589 0.9 Ensembl ENCODE 0.4 +7.1 7086 1.0 TCF12 JUND KLF16 BHLHE40 FOS FOXP2 KDM1A PRDM1 RAD21 MAFK BICC1 GC10M058597 GC10P058574
GH10G058636 1.2 Ensembl ENCODE dbSUPER 0.3 -40.3 -40288 2.0 SOX13 ZBTB40 GATA3 ZNF316 FOS NFE2 MAFK SOX5 MAFG CHD1 GC10M058597 GC10P058713
GH10G058640 1.2 Ensembl ENCODE dbSUPER 0.3 -44.5 -44507 3.4 CTCF SIN3A ZNF384 ZBTB40 RAD21 SMC3 ZNF362 ZNF654 L3MBTL2 GFI1B GC10M058597 GC10P058713
GH10G058659 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -64.3 -64315 3.7 FOXA2 MLX SIN3A ARID4B YY1 FOS MIER2 PPARG KAT8 NFIL3 GC10P058713 GC10M058597
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M058597 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M058597 Gene

Chromosome:
10
Start:
58,597,478 bp from pter
End:
58,597,510 bp from pter
Size:
33 bases
Orientation:
Minus strand

Genomic View for GC10M058597 Gene

Genes around GC10M058597 on UCSC Golden Path with GeneCards custom track

GC10M058597 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M058597 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10M058597 Gene

ORGUL Member Location for GC10M058597 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M058597 Gene

Proteins for GC10M058597 Gene

Post-translational modifications for GC10M058597 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M058597 Gene

Domains & Families for GC10M058597 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M058597 Gene

Function for GC10M058597 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M058597 Gene

Localization for GC10M058597 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10M058597 Gene

Pathways & Interactions for GC10M058597 Gene

SuperPathways for GC10M058597 Gene

No Data Available

Interacting Proteins for GC10M058597 Gene

Gene Ontology (GO) - Biological Process for GC10M058597 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M058597 Gene

Drugs & Compounds for GC10M058597 Gene

No Compound Related Data Available

Transcripts for GC10M058597 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M058597 Gene

No ASD Table

Relevant External Links for GC10M058597 Gene

GeneLoc Exon Structure for
GC10M058597

No data available for mRNA/cDNA for GC10M058597 Gene

Expression for GC10M058597 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M058597 Gene

Orthologs for GC10M058597 Gene

No data available for Orthologs and Evolution for GC10M058597 Gene

Paralogs for GC10M058597 Gene

No data available for Paralogs for GC10M058597 Gene

Variants for GC10M058597 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M058597 Gene

Disorders for GC10M058597 Gene

No disorders were found for GC10M058597 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M058597 Gene

Publications for GC10M058597 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC10M058597 Gene

Sources for GC10M058597 Gene

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